Protein ID | Ani_SJS72_1|g8860.t1 |
Gene name | |
Location | scaffold_087:65801..67612 |
Strand | - |
Gene length (bp) | 1811 |
Transcript length (bp) | 1386 |
Coding sequence length (bp) | 1386 |
Protein length (aa) | 462 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00106 | adh_short | short chain dehydrogenase | 5.0E-36 | 180 | 370 |
PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.3E-26 | 185 | 375 |
PF08659 | KR | KR domain | 2.3E-07 | 181 | 339 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 137 | 159 | 22 |
2 | 180 | 199 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8860.t1 MGRPWALRSLPSTLIDNLTQPQHITEAAASAKHHSPPQSRPQQPLLYTTQTAPSYHAPKPTYPLNPTSLTPTPTM ATSTTPKLIHTTPVQPTTTTTNTSNSNPPITLDLLLTTLTRTILHPIPSYILLLCLRAQATPYTSVPFLIAFAYA ALLTLIYILSTLNQQLAYGAPRTVDLSNEVVVVTGGASGLGLLIARIYALRGATVAVLDIRGIAGEEVEEMGLGG SYVCDVSDRGVLEGVVGRVRQELGTPTILIHCAAARINGLPLQQLSPEAFQKTINTNLLAAVHAYQVFLPYMLAA PDGGTIVTVSSVLGQLCAAGLADYSASKAGLSALHRSLEAELRQSGDEAKVKMVLVEPGQISTPLFESVQTPNRF FAPVLEPVQVAQAIVSAVDSGRGGVIRLPAFAMLVNWYAVLPASVQRLARYLSGIDGAVAQASSKADRADSSSQQ LQTELDHVKED* |
Coding | >Ani_SJS72_1|g8860.t1 ATGGGACGCCCATGGGCTCTTAGAAGTCTACCGTCAACCCTCATTGACAATCTCACCCAACCCCAACACATCACA GAAGCAGCAGCCTCCGCAAAACACCACTCACCACCGCAATCACGACCACAACAACCACTGCTATACACAACACAA ACCGCCCCCTCCTACCATGCCCCCAAGCCCACTTACCCTCTCAACCCAACATCCCTAACACCTACACCAACAATG GCCACCTCAACAACCCCCAAACTCATCCACACCACCCCCGTCCAACCCACAACCACCACCACCAACACCTCCAAT TCAAACCCCCCCATAACCCTCGACCTCCTCCTCACAACTCTCACTCGCACCATCCTCCACCCCATCCCATCCTAC ATTCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTACACCTCCGTCCCCTTCCTCATCGCCTTCGCCTACGCC GCCCTCCTCACCCTCATCTACATTCTAAGCACACTCAACCAGCAACTAGCATACGGAGCTCCACGCACAGTCGAT CTCTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAGCGGGTTGGGATTACTTATTGCGAGGATATATGCGCTT CGCGGCGCCACGGTAGCGGTTTTGGATATTCGGGGGATAGCGGGTGAGGAGGTGGAGGAGATGGGGTTGGGAGGG AGTTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGAGGGGGTTGTGGGGAGGGTGAGGCAGGAGTTGGGTACT CCTACCATATTGATCCATTGCGCAGCTGCAAGAATCAACGGGCTGCCTCTGCAACAGCTCTCTCCCGAGGCATTC CAGAAAACTATCAACACCAATTTACTCGCCGCCGTTCATGCCTATCAGGTATTTTTGCCTTATATGCTGGCTGCT CCGGATGGTGGCACCATTGTCACAGTGAGTTCCGTGCTCGGGCAGCTATGTGCGGCTGGGTTGGCGGATTACTCG GCTAGTAAGGCTGGGTTGAGCGCGTTGCATCGCTCGCTCGAGGCCGAACTTCGCCAATCCGGGGACGAGGCAAAA GTGAAGATGGTTCTGGTGGAGCCGGGCCAGATCTCAACGCCGCTGTTTGAATCCGTCCAGACACCAAACCGGTTC TTTGCGCCCGTTCTGGAGCCAGTCCAGGTGGCCCAGGCTATTGTCTCGGCTGTCGACAGCGGCAGGGGTGGCGTG ATAAGGTTGCCCGCGTTTGCCATGCTGGTGAACTGGTATGCGGTGTTGCCGGCGAGCGTGCAGCGGTTGGCGCGG TACCTGAGCGGGATTGACGGCGCAGTAGCACAAGCGTCGTCCAAAGCCGACAGGGCTGATTCGTCCAGCCAGCAA TTGCAGACTGAGTTGGATCACGTGAAAGAGGACTGA |
Transcript | >Ani_SJS72_1|g8860.t1 ATGGGACGCCCATGGGCTCTTAGAAGTCTACCGTCAACCCTCATTGACAATCTCACCCAACCCCAACACATCACA GAAGCAGCAGCCTCCGCAAAACACCACTCACCACCGCAATCACGACCACAACAACCACTGCTATACACAACACAA ACCGCCCCCTCCTACCATGCCCCCAAGCCCACTTACCCTCTCAACCCAACATCCCTAACACCTACACCAACAATG GCCACCTCAACAACCCCCAAACTCATCCACACCACCCCCGTCCAACCCACAACCACCACCACCAACACCTCCAAT TCAAACCCCCCCATAACCCTCGACCTCCTCCTCACAACTCTCACTCGCACCATCCTCCACCCCATCCCATCCTAC ATTCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTACACCTCCGTCCCCTTCCTCATCGCCTTCGCCTACGCC GCCCTCCTCACCCTCATCTACATTCTAAGCACACTCAACCAGCAACTAGCATACGGAGCTCCACGCACAGTCGAT CTCTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAGCGGGTTGGGATTACTTATTGCGAGGATATATGCGCTT CGCGGCGCCACGGTAGCGGTTTTGGATATTCGGGGGATAGCGGGTGAGGAGGTGGAGGAGATGGGGTTGGGAGGG AGTTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGAGGGGGTTGTGGGGAGGGTGAGGCAGGAGTTGGGTACT CCTACCATATTGATCCATTGCGCAGCTGCAAGAATCAACGGGCTGCCTCTGCAACAGCTCTCTCCCGAGGCATTC CAGAAAACTATCAACACCAATTTACTCGCCGCCGTTCATGCCTATCAGGTATTTTTGCCTTATATGCTGGCTGCT CCGGATGGTGGCACCATTGTCACAGTGAGTTCCGTGCTCGGGCAGCTATGTGCGGCTGGGTTGGCGGATTACTCG GCTAGTAAGGCTGGGTTGAGCGCGTTGCATCGCTCGCTCGAGGCCGAACTTCGCCAATCCGGGGACGAGGCAAAA GTGAAGATGGTTCTGGTGGAGCCGGGCCAGATCTCAACGCCGCTGTTTGAATCCGTCCAGACACCAAACCGGTTC TTTGCGCCCGTTCTGGAGCCAGTCCAGGTGGCCCAGGCTATTGTCTCGGCTGTCGACAGCGGCAGGGGTGGCGTG ATAAGGTTGCCCGCGTTTGCCATGCTGGTGAACTGGTATGCGGTGTTGCCGGCGAGCGTGCAGCGGTTGGCGCGG TACCTGAGCGGGATTGACGGCGCAGTAGCACAAGCGTCGTCCAAAGCCGACAGGGCTGATTCGTCCAGCCAGCAA TTGCAGACTGAGTTGGATCACGTGAAAGAGGACTGA |
Gene | >Ani_SJS72_1|g8860.t1 ATGGGACGCCCATGGGCTCTTAGGTAACAGCGGACGGCAATGTGAACATATTTGTATATTTGAACTTTCAAGAAT CAATTGCAAATTCGATCTAGAGAATTAAGGCAAACGCTCTATGCATAGCTTCTGCACAACCTTAACTCGGCCATG AACTGAACTGAACTGAACCATCCGCAGCCCCACATCGCAATCGTCTGGCCAGTGCTTCTTTCTCCTCACTCCCTC CAAGCTCCAACTGTTAGGATCTCCAATATTGAGACACTACAATCTAGAAGTCTACCGTCAACCCTCATTGACAAT CTCACCCAGTAAGCCCTTCCCCTTCAATCAGCTATCACACCCCCTATCTAAGCGCCGACAGCTCCTAACCAACCA ATCACAGACCCCAACACATCACAGAAGCAGCAGCCTCCGCAAAACACCACTCACCACCGCAATCACGACCACAAC AACCACTGCTATACACAACACAAACCGCCCCCTCCTACCATGCCCCCAAGCCCACTTACCCTCTCAACCCAACAT CCCTAACACCTACACCAACAATGGCCACCTCAACAACCCCCAAACTCATCCACACCACCCCCGTCCAACCCACAA CCACCACCACCAACACCTCCAATTCAAACCCCCCCATAACCCTCGACCTCCTCCTCACAACTCTCACTCGCACCA TCCTCCACCCCATCCCATCCTACATTCTTCTCCTGTGCCTCCGCGCCCAAGCAACCCCCTACACCTCCGTCCCCT TCCTCATCGCCTTCGCCTACGCCGCCCTCCTCACCCTCATCTACATTCTAAGCACACTCAACCAGCAACTAGCAT ACGGAGCTCCACGCACAGTCGATCTCTCCAATGAAGTGGTGGTCGTGACGGGCGGAGCGAGCGGGTTGGGATTAC TTATTGCGAGGATATATGCGCTTCGCGGCGCCACGGTAGCGGTTTTGGATATTCGGGGGATAGCGGGTGAGGAGG TGGAGGAGATGGGGTTGGGAGGGAGTTATGTTTGTGATGTTTCGGATAGGGGGGTTTTGGAGGGGGTTGTGGGGA GGGTGAGGCAGGAGGTATGTATAATTTCCTATTATTGTGTACAAAGGGGAAGAAGAAAGGTATGGATATGGGTAT ATTGATGATGGCTAACTATTCATTGATTGATTGCGGGATAGTTGGGTACTCCTACCATATTGATCCATTGCGCAG CTGCAAGAATCAACGGGCTGCCTCTGCAACAGCTCTCTCCCGAGGCATTCCAGAAAACTATCAACACCAATTTAC TCGCCGCCGTTCATGCCTATCAGGTATTTTTGCCTTATATGCTGGCTGCTCCGGATGGTGGCACCATTGTCACAG TGAGTTCCGTGCTCGGGCAGCTATGTGCGGCTGGGTTGGCGGATTACTCGGCTAGTAAGGCTGGGTTGAGCGCGT TGCATCGCTCGCTCGAGGCCGAACTTCGCCAATCCGGGGACGAGGCAAAAGTGAAGATGGTTCTGGTGGAGCCGG GCCAGATCTCAACGCCGCTGTTTGAATCCGTCCAGACACCAAACCGGTTCTTTGCGCCCGTTCTGGAGCCAGTCC AGGTGGCCCAGGCTATTGTCTCGGCTGTCGACAGCGGCAGGGGTGGCGTGATAAGGTTGCCCGCGTTTGCCATGC TGGTGAACTGGTATGCGGTGTTGCCGGCGAGCGTGCAGCGGTTGGCGCGGTACCTGAGCGGGATTGACGGCGCAG TAGCACAAGCGTCGTCCAAAGCCGACAGGGCTGATTCGTCCAGCCAGCAATTGCAGACTGAGTTGGATCACGTGA AAGAGGACTGA |