Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g8748.t1
Gene name
Location	scaffold_084:127663..128487
Strand	+
Gene length (bp)	824
Transcript length (bp)	567
Coding sequence length (bp)	567
Protein length (aa)	189

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10785	NADH-u_ox-rdase	NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit	6.8E-31	16	102
PF12853	NADH_u_ox_C	C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit	9.8E-26	111	182

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 63	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	40	57	17
2	72	90	18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g8748.t1 MATDHKSILVPPKRANTDYPLIDSDPHLRRVFGYARPSDYAVGGGMAAASPLAFWIMERVSPSHVGRGGFAPVMR LATAIGLIGGLHVVYQRSCNRFYGFTENSREADMDMKEMVDKVKKGESLYGTSKVSSYLQGVAARNSRYSELFIH VLPWFNLVNHDQHGVDTAKYYQQAERELEAERLKQASS*
Coding	>Ani_SJS72_1\|g8748.t1 ATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGGGCCAATACGGACTACCCGCTAATTGACTCCGAC CCGCACCTGAGACGAGTTTTCGGATATGCACGACCCTCTGACTACGCAGTGGGCGGCGGAATGGCCGCTGCGTCT CCTCTTGCGTTCTGGATTATGGAAAGAGTGAGCCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGC CTAGCAACAGCCATTGGCCTTATTGGAGGTCTTCACGTGGTCTATCAGAGATCCTGCAACCGCTTCTATGGCTTC ACAGAGAATTCGAGGGAAGCTGATATGGATATGAAGGAGATGGTGGACAAAGTCAAGAAAGGGGAGTCCCTATAT GGCACATCCAAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTCTAGATACTCTGAGCTATTTATCCAT GTTCTTCCATGGTTCAACCTAGTCAACCATGACCAGCATGGCGTCGACACGGCCAAATACTATCAGCAAGCCGAG CGGGAGCTGGAAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGA
Transcript	>Ani_SJS72_1\|g8748.t1 ATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGGGCCAATACGGACTACCCGCTAATTGACTCCGAC CCGCACCTGAGACGAGTTTTCGGATATGCACGACCCTCTGACTACGCAGTGGGCGGCGGAATGGCCGCTGCGTCT CCTCTTGCGTTCTGGATTATGGAAAGAGTGAGCCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGC CTAGCAACAGCCATTGGCCTTATTGGAGGTCTTCACGTGGTCTATCAGAGATCCTGCAACCGCTTCTATGGCTTC ACAGAGAATTCGAGGGAAGCTGATATGGATATGAAGGAGATGGTGGACAAAGTCAAGAAAGGGGAGTCCCTATAT GGCACATCCAAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTCTAGATACTCTGAGCTATTTATCCAT GTTCTTCCATGGTTCAACCTAGTCAACCATGACCAGCATGGCGTCGACACGGCCAAATACTATCAGCAAGCCGAG CGGGAGCTGGAAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGA
Gene	>Ani_SJS72_1\|g8748.t1 ATGGCGACTGATCACAAATCAATTCTTGTCCCCCCGAAGCGGGCCAATACGGACTACCCGGTAGGGTCGATGTTC TTTATTCGACTTGGACTTACGGATCTTGCGGCTAACTTGAGCTTTTGTAGCTAATTGACTCCGACCCGTATGGAC TAGCTTGACGTTACCATATTGCAATTGACTCACTTTTCAAACCAGGCACCTGAGACGAGTTTTCGGATATGCACG ACCCTCTGACTACGCAGTGGGCGGCGGAATGGCCGCTGCGTCTCCTCTTGCGTTCTGGATTATGGAAAGAGTGAG CCCATCCCATGTGGGCAGGGGAGGGTTCGCTCCTGTGATGCGCCTAGCAACAGCCATTGGCCTTATTGGAGGTCT TCACGTGGTCTATCAGAGATCCTGCAGTCAGTGCAACCATGGTTTTGGTCTACATCTTTTTTAACACTAACGCTC TTGTACAGACCGCTTCTATGGCTTCACAGAGAATTCGAGGGAAGCTGATATGGATATGAAGGAGATGGTGGACAA AGTCAAGAAAGGGGAGTCCCTATATGGCACATCCAAAGTCTCCTCATACCTGCAAGGAGTTGCTGCTCGAAACTC TAGATACTCTGAGCTATTTATCCATGTTCTTCCATGGTTCAACCTAGTCAACCATGACCAGGTAAGTGCAATGGA GGAGCGACCGCCTTTCATACGTAATCATCAGCGCTGAATACCAAATTGGTTACTAACTGCAATACAAGCATGGCG TCGACACGGCCAAATACTATCAGCAAGCCGAGCGGGAGCTGGAAGCCGAGCGGTTGAAGCAAGCGAGCTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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