© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8733.t1 |
| Gene name | |
| Location | scaffold_084:84423..85383 |
| Strand | - |
| Gene length (bp) | 960 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00179 | UQ_con | Ubiquitin-conjugating enzyme | 6.2E-20 | 9 | 120 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 253 | 270 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8733.t1 MATKAAFKRLTREYQNIQKNPPPYIVAHPSESNILEWHYILTGPPGTPYENGQYWGTLMFPPEYPFAPPAIRMHT PSGRFQPSTRLCLSISDFHPKSFNPAWEVSTILIGLLSFMTSEEMTTGSVSASEAERRVLAARSRWWNSTGGGSH VSATPGVTPTAKGINNVKAGDGGLKFRSEWPELDQENWRWMKDSRIDTNTGQLMPDPSATRCSPETSALRRRPNG SAPGLGAVMEGGHVAREAGQSWVRRNKIWLGFAILFGYALLTRLVKDVQG* |
| Coding | >Ani_SJS72_1|g8733.t1 ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATT GTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACT CCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTG AGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAG TTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGT AGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGC TAA |
| Transcript | >Ani_SJS72_1|g8733.t1 ATGGCGACAAAAGCGGCTTTCAAGCGCCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATT GTGGCACATCCGTCAGAGTCCAACATACTCGAATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAA AATGGCCAGTATTGGGGTACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACT CCTAGCGGTCGTTTTCAACCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCC GCATGGGAGGTTTCTACCATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTG AGTGCATCGGAGGCAGAGCGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCAT GTCAGTGCCACCCCAGGAGTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAG TTTCGCTCGGAGTGGCCAGAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACT GGCCAGCTCATGCCTGATCCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGT AGCGCCCCGGGACTCGGTGCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGC AACAAGATCTGGCTTGGGTTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGC TAA |
| Gene | >Ani_SJS72_1|g8733.t1 ATGGCGACAAAAGCGGCTTTCAAGCGCGTGCGTTGCGCCCTTTCAAAATGCGGTCATTTTATTGCATTGTATAAC TAACAGATGAACAGCTTACTCGCGAGTATCAGAACATTCAGAAGAATCCCCCGCCTTACATTGTGGCACATCCGT CAGAGTCCAACATACTCGAGTACGTCATTTACAACAGACTATCACCACCTGCGTCGCTTGTTTGCGACTAAAGTT GACCTTTCATTCAGATGGCACTACATCCTTACGGGACCTCCGGGCACGCCGTATGAAAATGGCCAGTATTGGGGT ACCCTAATGTTCCCTCCCGAGTACCCGTTTGCTCCTCCGGCTATTCGCATGCACACTCCTAGCGGTCGTTTTCAA CCATCAACTCGGCTATGCCTCAGCATCAGCGACTTTCATCCGAAGTCATTTAATCCCGCATGGGAGGTTTCTACC ATCCTCATTGGCTTGCTTTCCTTCATGACGAGCGAGGAGATGACCACCGGAAGCGTGAGTGCATCGGAGGCAGAG CGACGAGTGCTGGCGGCACGGTCTAGGTGGTGGAATTCCACTGGTGGCGGTTCCCATGTCAGTGCCACCCCAGGA GTGACCCCTACTGCCAAGGGTATCAACAATGTGAAAGCTGGAGACGGCGGTCTGAAGTTTCGCTCGGAGTGGCCA GAGCTCGACCAAGAGAATTGGAGGTGGATGAAGGATAGTCGCATCGACACCAACACTGGCCAGCTCATGCCTGAT CCCAGTGCGACCAGATGCTCTCCAGAGACAAGTGCGCTTCGCCGACGACCGAACGGTAGCGCCCCGGGACTCGGT GCGGTGATGGAAGGCGGCCATGTCGCCCGAGAAGCAGGCCAAAGCTGGGTCCGCCGCAACAAGATCTGGCTTGGG TTTGCAATCCTATTCGGATATGCACTTCTGACCAGGCTAGTGAAAGATGTTCAAGGCTAA |