Protein ID | Ani_SJS72_1|g8645.t1 |
Gene name | |
Location | scaffold_082:115754..117040 |
Strand | + |
Gene length (bp) | 1286 |
Transcript length (bp) | 1158 |
Coding sequence length (bp) | 1158 |
Protein length (aa) | 386 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01569 | PAP2 | PAP2 superfamily | 3.7E-27 | 136 | 321 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 28 | 50 | 22 |
2 | 79 | 101 | 22 |
3 | 132 | 149 | 17 |
4 | 224 | 246 | 22 |
5 | 266 | 288 | 22 |
6 | 298 | 320 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8645.t1 MTPSKSEDTPPPAAHHHRLSYQQFSKRLILSYILDWTLIIGVALIGFGFSQTTPNHRPFSLTDPSISFPHREKDT VSTGVLAVVAIIAPAVIIIFVSFLFINLNTTTIAGTSGRNARKEILRRKLMVKLWEWNAGWMGLGVALAGTFMAT EGLKDLYGKPRPDMLARCDPDISAINEYAVSGLGRRLAGAPTMVTWEICRNKGDETLKVDGFASFPSGHSSISFA GLMYLALWLSAKFSIGFPFLAYSPLGHDLGRQDRGKIRNQGAAPPVYMLIITLVPIAVAFFISASRWFDYRHHGF DIIFGSVMGMVFAYIGFRLYQLPIIRGAGWSWGARSREHAFFMGVGLPSHVSTDSWVSMSDKRDAVESSSHNVDL ESGRQSATER* |
Coding | >Ani_SJS72_1|g8645.t1 ATGACGCCTTCTAAATCAGAGGATACCCCTCCCCCCGCAGCCCATCATCATCGACTCTCATACCAACAATTCTCC AAGCGCCTGATCCTCTCTTACATACTCGACTGGACCCTCATTATCGGAGTCGCTCTCATCGGCTTTGGCTTCTCC CAAACCACCCCCAACCACCGACCCTTCTCCCTCACCGACCCAAGCATCTCCTTCCCCCACAGGGAAAAAGATACC GTCTCAACAGGCGTGCTAGCCGTGGTAGCGATAATAGCTCCAGCTGTGATTATCATCTTCGTCTCCTTTCTCTTC ATCAATCTGAATACTACCACCATTGCCGGCACTAGTGGTCGAAACGCACGAAAAGAGATACTAAGACGGAAACTG ATGGTAAAGCTCTGGGAATGGAATGCAGGATGGATGGGCTTAGGAGTCGCCCTTGCGGGAACGTTCATGGCTACG GAGGGACTAAAGGATCTATATGGGAAGCCGAGGCCGGATATGCTGGCCAGGTGTGACCCGGATATATCTGCGATT AACGAGTATGCGGTTTCGGGGTTGGGAAGGAGACTTGCGGGTGCGCCTACGATGGTGACGTGGGAGATATGTCGG AATAAGGGGGATGAGACGTTGAAGGTGGATGGGTTTGCTAGTTTTCCGAGTGGGCATTCTTCGATTTCGTTCGCG GGATTGATGTATCTCGCTCTTTGGCTAAGTGCTAAATTCTCCATTGGGTTCCCATTCCTGGCCTATTCGCCGCTC GGCCATGATCTGGGAAGACAGGACCGTGGAAAGATTCGAAACCAGGGTGCCGCTCCTCCTGTCTATATGCTCATC ATTACACTAGTGCCCATCGCTGTGGCCTTCTTCATATCTGCATCGCGTTGGTTCGACTATCGTCATCATGGTTTC GATATCATATTCGGATCGGTCATGGGAATGGTCTTCGCGTATATTGGCTTCCGATTGTATCAGCTTCCCATCATT CGTGGTGCGGGCTGGTCGTGGGGAGCTAGAAGTCGCGAACATGCGTTCTTCATGGGCGTTGGACTCCCCAGCCAC GTTTCTACCGACAGCTGGGTTTCGATGAGCGACAAACGAGATGCCGTAGAGAGCAGCTCGCATAACGTTGATCTG GAAAGTGGTCGACAGAGCGCGACTGAGCGATGA |
Transcript | >Ani_SJS72_1|g8645.t1 ATGACGCCTTCTAAATCAGAGGATACCCCTCCCCCCGCAGCCCATCATCATCGACTCTCATACCAACAATTCTCC AAGCGCCTGATCCTCTCTTACATACTCGACTGGACCCTCATTATCGGAGTCGCTCTCATCGGCTTTGGCTTCTCC CAAACCACCCCCAACCACCGACCCTTCTCCCTCACCGACCCAAGCATCTCCTTCCCCCACAGGGAAAAAGATACC GTCTCAACAGGCGTGCTAGCCGTGGTAGCGATAATAGCTCCAGCTGTGATTATCATCTTCGTCTCCTTTCTCTTC ATCAATCTGAATACTACCACCATTGCCGGCACTAGTGGTCGAAACGCACGAAAAGAGATACTAAGACGGAAACTG ATGGTAAAGCTCTGGGAATGGAATGCAGGATGGATGGGCTTAGGAGTCGCCCTTGCGGGAACGTTCATGGCTACG GAGGGACTAAAGGATCTATATGGGAAGCCGAGGCCGGATATGCTGGCCAGGTGTGACCCGGATATATCTGCGATT AACGAGTATGCGGTTTCGGGGTTGGGAAGGAGACTTGCGGGTGCGCCTACGATGGTGACGTGGGAGATATGTCGG AATAAGGGGGATGAGACGTTGAAGGTGGATGGGTTTGCTAGTTTTCCGAGTGGGCATTCTTCGATTTCGTTCGCG GGATTGATGTATCTCGCTCTTTGGCTAAGTGCTAAATTCTCCATTGGGTTCCCATTCCTGGCCTATTCGCCGCTC GGCCATGATCTGGGAAGACAGGACCGTGGAAAGATTCGAAACCAGGGTGCCGCTCCTCCTGTCTATATGCTCATC ATTACACTAGTGCCCATCGCTGTGGCCTTCTTCATATCTGCATCGCGTTGGTTCGACTATCGTCATCATGGTTTC GATATCATATTCGGATCGGTCATGGGAATGGTCTTCGCGTATATTGGCTTCCGATTGTATCAGCTTCCCATCATT CGTGGTGCGGGCTGGTCGTGGGGAGCTAGAAGTCGCGAACATGCGTTCTTCATGGGCGTTGGACTCCCCAGCCAC GTTTCTACCGACAGCTGGGTTTCGATGAGCGACAAACGAGATGCCGTAGAGAGCAGCTCGCATAACGTTGATCTG GAAAGTGGTCGACAGAGCGCGACTGAGCGATGA |
Gene | >Ani_SJS72_1|g8645.t1 ATGACGCCTTCTAAATCAGAGGATACCCCTCCCCCCGCAGCCCATCATCATCGACTCTCATACCAACAATTCTCC AAGCGCCTGATCCTCTCTTACATACTCGACTGGACCCTCATTATGTATGTCCTCCATACTCTAGACAAACCCCAA CAAACTAGGCACTACTCACTAATAAAATTTCAGCGGAGTCGCTCTCATCGGCTTTGGCTTCTCCCAAACCACCCC CAACCACCGACCCTTCTCCCTCACCGACCCAAGCATCTCCTTCCCCCACAGGGAAAAAGATACCGTCTCAACAGG CGTGCTAGCCGTGGTAGCGATAATAGCTCCAGCTGTGATTATCATCTTCGTCTCCTTTCTCTTCATCAATCTGAA TACTACCACCATTGCCGGCACTAGTGGTCGAAACGCACGAAAAGAGATACTAAGACGGAAACTGATGGTAAAGCT CTGGGAATGGAATGCAGGATGGATGGGCTTAGGAGTCGCCCTTGCGGGAACGTTCATGGCTACGGAGGGACTAAA GGATCTATATGGGAAGCCGAGGCCGGATATGCTGGCCAGGTGTGACCCGGATATATCTGCGATTAACGAGTATGC GGTTTCGGGGTTGGGAAGGAGACTTGCGGGTGCGCCTACGATGGTGACGTGGGAGATATGTCGGAATAAGGGGGA TGAGACGTTGAAGGTGGATGGGTTTGCTAGTTTTCCGAGTGGGCATTCTTCGAGTGAGTTTATCTATGTCCAGGG AGATGAGAGTGGTGGGATGGATCTGACATGGGGACTATCTAGTTTCGTTCGCGGGATTGATGTATCTCGCTCTTT GGCTAAGTGCTAAATTCTCCATTGGGTTCCCATTCCTGGCCTATTCGCCGCTCGGCCATGATCTGGGAAGACAGG ACCGTGGAAAGATTCGAAACCAGGGTGCCGCTCCTCCTGTCTATATGCTCATCATTACACTAGTGCCCATCGCTG TGGCCTTCTTCATATCTGCATCGCGTTGGTTCGACTATCGTCATCATGGTTTCGATATCATATTCGGATCGGTCA TGGGAATGGTCTTCGCGTATATTGGCTTCCGATTGTATCAGCTTCCCATCATTCGTGGTGCGGGCTGGTCGTGGG GAGCTAGAAGTCGCGAACATGCGTTCTTCATGGGCGTTGGACTCCCCAGCCACGTTTCTACCGACAGCTGGGTTT CGATGAGCGACAAACGAGATGCCGTAGAGAGCAGCTCGCATAACGTTGATCTGGAAAGTGGTCGACAGAGCGCGA CTGAGCGATGA |