Protein ID | Ani_SJS72_1|g8616.t1 |
Gene name | |
Location | scaffold_082:31093..33459 |
Strand | - |
Gene length (bp) | 2366 |
Transcript length (bp) | 1881 |
Coding sequence length (bp) | 1881 |
Protein length (aa) | 627 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 1.5E-05 | 494 | 516 |
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 2.5E-06 | 522 | 544 |
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 1.4E-03 | 579 | 604 |
PF13894 | zf-C2H2_4 | C2H2-type zinc finger | 2.7E-04 | 522 | 544 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 5.9E-04 | 494 | 517 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 3 |
Orthogroup | 9212 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8616.t1 MLAPKVLIPSLSGAFPLDDLCIAYLDCNLFSLTKTGTPQIILFLSPPPQSSSGACRSSIDTMASHTKKDDFCLEC HWEAFHLDGKEAEDASEAQPVQWNCSDQVHHTPAPPCNGDDDCNVEEDCCDVDDCSITCPSVCDGFVDCGDAAVC SVSHCDEDHCENTDPVCFDEHCFGTGTNIDGEHSLESLLGLGTPLNLDTSDLLSPTTMPQSQVEQPKTMTQPTGM VPSAPTSDAFFTPYAPASHCHSHSHQHFHCHDISKDAHHAANPWLPLQNAVNPADVFHMMCPDLSACHQFHVHEV QNCPDQGKPADDAASNSFTCFHIPHHPHHHHPPNEVKNPAPTQKPTNNWKPCRTHVHRCRTHGHHVHSYSPYSPY SRHSRSSVSSQLSPGETPPPLEGGTSSVLTSPEYVPDTEVFICRWISKADGTQLPCGATFADACGLQEHLVASHM ATVDGAKGTGYYCCWEGCHRPDEPFSQKSKLQGHFLTHSNYKNFKCSVCGKMFARQATLERHERSHRGEKPYKCS ECGKSFTDSSELKTHSRTHTGEKPFKCTYPGCNFQTGDSSNMSSHRLTHGERRHKCHHAGCTKSFTRHDQLKRHL RTTHKEDISLGTPMPDDFGLAFAEVA* |
Coding | >Ani_SJS72_1|g8616.t1 ATGCTGGCTCCCAAGGTCCTCATCCCATCGCTTTCAGGCGCCTTCCCGTTGGACGATCTCTGCATTGCCTACCTT GATTGCAATTTGTTTTCATTGACAAAGACAGGCACACCCCAGATCATCCTATTCCTGTCCCCCCCGCCTCAGAGC TCCTCTGGCGCCTGTCGATCGTCAATCGACACCATGGCTTCTCACACGAAGAAAGACGATTTCTGTCTTGAATGC CATTGGGAGGCATTCCACCTGGATGGAAAGGAGGCAGAAGATGCTTCGGAGGCGCAGCCAGTCCAATGGAATTGC TCCGACCAGGTACATCACACCCCAGCACCGCCTTGCAATGGGGATGACGACTGCAATGTCGAGGAGGACTGCTGT GATGTTGACGACTGTTCAATCACCTGTCCCTCCGTCTGTGACGGTTTCGTCGACTGCGGTGATGCTGCAGTATGC TCAGTCTCGCACTGCGACGAAGATCATTGCGAGAACACCGACCCGGTCTGCTTTGATGAACACTGCTTCGGCACT GGCACCAACATAGATGGCGAACACAGTTTGGAGTCGCTGCTAGGGTTGGGAACACCTCTTAACCTCGACACTAGC GACCTACTATCCCCGACCACCATGCCACAGTCGCAGGTAGAGCAACCCAAGACCATGACGCAACCTACGGGCATG GTACCCTCTGCACCGACAAGTGATGCATTCTTCACTCCTTATGCACCTGCATCCCACTGTCACTCCCACAGTCAT CAGCATTTTCACTGTCATGATATATCCAAGGATGCTCACCATGCAGCAAATCCGTGGTTACCTCTGCAGAACGCA GTCAACCCGGCGGATGTATTCCACATGATGTGCCCTGACCTGTCTGCGTGCCATCAGTTCCACGTCCACGAAGTG CAGAACTGCCCTGATCAGGGCAAACCTGCCGATGATGCGGCCTCGAACTCGTTCACCTGCTTCCACATCCCTCAC CATCCCCACCACCACCACCCGCCGAACGAAGTGAAGAACCCAGCTCCGACGCAGAAGCCAACCAATAACTGGAAG CCATGCCGCACGCATGTTCATCGGTGTCGCACACACGGACACCATGTCCATTCCTATTCACCCTACTCGCCGTAC TCCCGCCATTCGCGGTCCAGCGTGAGCTCGCAGTTGAGTCCGGGCGAGACGCCACCCCCGCTGGAAGGGGGTACC TCGTCCGTCTTGACCAGTCCGGAATATGTCCCCGATACCGAGGTATTCATCTGCCGGTGGATATCGAAGGCTGAC GGGACTCAGCTCCCCTGCGGCGCCACTTTCGCGGATGCATGCGGTCTGCAGGAACATCTGGTGGCAAGCCACATG GCGACCGTAGATGGCGCCAAGGGTACGGGATATTACTGCTGCTGGGAAGGGTGTCATCGGCCGGACGAGCCGTTT TCGCAAAAGTCGAAGCTGCAGGGGCATTTCTTGACCCACAGTAATTACAAAAACTTCAAATGCTCAGTTTGCGGG AAGATGTTTGCGCGACAGGCAACCTTGGAGCGGCACGAGCGGAGCCACCGAGGCGAGAAGCCGTACAAGTGTTCG GAGTGCGGGAAGTCGTTTACCGACAGCAGCGAGCTGAAAACGCATTCGCGGACGCACACGGGCGAGAAGCCCTTC AAATGCACGTACCCGGGGTGTAACTTCCAGACTGGCGACTCATCAAACATGTCCAGCCACCGATTGACACACGGC GAGCGCCGACACAAGTGCCACCACGCCGGATGCACCAAGAGCTTCACGCGACACGACCAACTTAAACGACATTTA AGAACCACGCACAAAGAAGACATCTCACTAGGTACTCCGATGCCGGATGACTTCGGACTTGCCTTCGCCGAAGTG GCGTGA |
Transcript | >Ani_SJS72_1|g8616.t1 ATGCTGGCTCCCAAGGTCCTCATCCCATCGCTTTCAGGCGCCTTCCCGTTGGACGATCTCTGCATTGCCTACCTT GATTGCAATTTGTTTTCATTGACAAAGACAGGCACACCCCAGATCATCCTATTCCTGTCCCCCCCGCCTCAGAGC TCCTCTGGCGCCTGTCGATCGTCAATCGACACCATGGCTTCTCACACGAAGAAAGACGATTTCTGTCTTGAATGC CATTGGGAGGCATTCCACCTGGATGGAAAGGAGGCAGAAGATGCTTCGGAGGCGCAGCCAGTCCAATGGAATTGC TCCGACCAGGTACATCACACCCCAGCACCGCCTTGCAATGGGGATGACGACTGCAATGTCGAGGAGGACTGCTGT GATGTTGACGACTGTTCAATCACCTGTCCCTCCGTCTGTGACGGTTTCGTCGACTGCGGTGATGCTGCAGTATGC TCAGTCTCGCACTGCGACGAAGATCATTGCGAGAACACCGACCCGGTCTGCTTTGATGAACACTGCTTCGGCACT GGCACCAACATAGATGGCGAACACAGTTTGGAGTCGCTGCTAGGGTTGGGAACACCTCTTAACCTCGACACTAGC GACCTACTATCCCCGACCACCATGCCACAGTCGCAGGTAGAGCAACCCAAGACCATGACGCAACCTACGGGCATG GTACCCTCTGCACCGACAAGTGATGCATTCTTCACTCCTTATGCACCTGCATCCCACTGTCACTCCCACAGTCAT CAGCATTTTCACTGTCATGATATATCCAAGGATGCTCACCATGCAGCAAATCCGTGGTTACCTCTGCAGAACGCA GTCAACCCGGCGGATGTATTCCACATGATGTGCCCTGACCTGTCTGCGTGCCATCAGTTCCACGTCCACGAAGTG CAGAACTGCCCTGATCAGGGCAAACCTGCCGATGATGCGGCCTCGAACTCGTTCACCTGCTTCCACATCCCTCAC CATCCCCACCACCACCACCCGCCGAACGAAGTGAAGAACCCAGCTCCGACGCAGAAGCCAACCAATAACTGGAAG CCATGCCGCACGCATGTTCATCGGTGTCGCACACACGGACACCATGTCCATTCCTATTCACCCTACTCGCCGTAC TCCCGCCATTCGCGGTCCAGCGTGAGCTCGCAGTTGAGTCCGGGCGAGACGCCACCCCCGCTGGAAGGGGGTACC TCGTCCGTCTTGACCAGTCCGGAATATGTCCCCGATACCGAGGTATTCATCTGCCGGTGGATATCGAAGGCTGAC GGGACTCAGCTCCCCTGCGGCGCCACTTTCGCGGATGCATGCGGTCTGCAGGAACATCTGGTGGCAAGCCACATG GCGACCGTAGATGGCGCCAAGGGTACGGGATATTACTGCTGCTGGGAAGGGTGTCATCGGCCGGACGAGCCGTTT TCGCAAAAGTCGAAGCTGCAGGGGCATTTCTTGACCCACAGTAATTACAAAAACTTCAAATGCTCAGTTTGCGGG AAGATGTTTGCGCGACAGGCAACCTTGGAGCGGCACGAGCGGAGCCACCGAGGCGAGAAGCCGTACAAGTGTTCG GAGTGCGGGAAGTCGTTTACCGACAGCAGCGAGCTGAAAACGCATTCGCGGACGCACACGGGCGAGAAGCCCTTC AAATGCACGTACCCGGGGTGTAACTTCCAGACTGGCGACTCATCAAACATGTCCAGCCACCGATTGACACACGGC GAGCGCCGACACAAGTGCCACCACGCCGGATGCACCAAGAGCTTCACGCGACACGACCAACTTAAACGACATTTA AGAACCACGCACAAAGAAGACATCTCACTAGGTACTCCGATGCCGGATGACTTCGGACTTGCCTTCGCCGAAGTG GCGTGA |
Gene | >Ani_SJS72_1|g8616.t1 ATGCTGGCTCCCAAGGTCCTCATCCCATCGCTTTCAGGCGGTCTGTCTTTTCTCTCTCCGACGTTTCTATCGGCT GTTCTTCATTCTTGGTGATCTCTGCGCATAGTCCAGTCGCACCACTGGCCTTCTAGCCTTCCCGTTGGACGATCT CTGCATTGCCTACCTTGATTGCAATTTGTTTTCATTGGTAAGAGTGTCTCTCTTCCCGTTCGCGTGGTGTGGAGG GCAAGCTAACTTGCCACTTGCGTGCTCTGCGTCAGACAAAGACAGGCACACCCCAGATCATCCTATTCCTGTCCC CCCCGCCTCAGAGCTCCTCTGGCGGTTTGTTCCGTTCATCATCCCCTCTCCAGTGTGACTGTTGCTTCAGCCTCG CGATTGACTGGGGACTCTCTGTCTATCATCTCAAGCCTGTCGATCGTCAATCGACACCATGGCTTCTCACACGAA GAAAGACGATTTCTGTCTTGAATGCCATTGGGAGGCATTCCACCTGGATGGAAAGGAGGCAGAAGATGCTTCGGA GGCGCAGCCAGTCCAATGGAATTGCTCCGACCAGGTACATCACACCCCAGCACCGCCTTGCAATGGGGATGACGA CTGCAATGTCGAGGAGGACTGCTGTGATGTTGACGACTGTTCAATCACCTGTCCCTCCGTCTGTGACGGTTTCGT CGACTGCGGTGATGCTGCAGTATGCTCAGTCTCGCACTGCGACGAAGATCATTGCGAGAACACCGACCCGGTCTG CTTTGATGAACACTGCTTCGGCACTGGCACCAACATAGATGGCGAACACAGTTTGGAGTCGCTGCTAGGGTTGGG AACACCTCTTAACCTCGACACTAGCGACCTACTATCCCCGACCACCATGCCACAGTCGCAGGTAGAGCAACCCAA GACCATGACGCAACCTACGGGCATGGTACCCTCTGCACCGACAAGTGATGCATTCTTCACTCCTTATGCACCTGC ATCCCACTGTCACTCCCACAGTCATCAGCATTTTCACTGTCATGATATATCCAAGGATGCTCACCATGCAGCAAA TCCGTGGTTACCTCTGCAGAACGCAGTCAACCCGGCGGATGTATTCCACATGATGTGCCCTGACCTGTCTGCGTG CCATCAGTTCCACGTCCACGAAGTGCAGAACTGCCCTGATCAGGGCAAACCTGCCGATGATGCGGCCTCGAACTC GTTCACCTGCTTCCACATCCCTCACCATCCCCACCACCACCACCCGCCGAACGAAGTGAAGAACCCAGCTCCGAC GCAGAAGCCAACCAATAACTGGAAGCCATGCCGCACGCATGTTCATCGGTGTCGCACACACGGACACCATGTCCA TTCCTATTCACCCTACTCGCCGTACTCCCGCCATTCGCGGTCCAGCGTGAGCTCGCAGTTGAGTCCGGGCGAGAC GCCACCCCCGCTGGAAGGGGGTACCTCGTCCGTCTTGACCAGTCCGGAATATGTCCCCGATACCGAGGTATTCAT CTGCCGGTGGATATCGAAGGCTGACGGGACTCAGCTCCCCTGCGGCGCCACTTTCGCGGATGCATGCGGTCTGCA GGAACATCTGGTGGCAAGCCACATGGCGACCGTAGATGGCGCCAAGGGTACGGGATATTACTGCTGCTGGGAAGG GTGTCATCGGCCGGACGAGCCGTTTTCGCAAAAGTCGAAGCTGCAGGGGCATTTCTTGACCCACAGTAATTGTAA GTGCACGCCCCGGAAACTTATAGGACGAATGCTGACAATATAGACAAAAACTTCAAATGCTCAGTTTGCGGGAAG ATGTTTGCGCGACAGGCAACCTTGGAGCGGCACGAGCGGAGCCACCGAGGCGAGAAGCCGTACAAGTGTTCGGAG TGCGGGAAGTCGTTTACCGACAGCAGCGAGCTGAGTATGTGCAAAGCATCTTTTAGATGAATAGAAACTGACAAG ATAGAAACGCATTCGCGGACGCACACGGGCGAGAAGCCCTTCAAATGCACGTACCCGGGGTGTAACTTCCAGACT GGCGACGTAAGTACAGCCAACCAGAATGAGGGAAGTCAAGCTAACAGATTCAGTCATCAAACATGTCCAGCCACC GATTGAGTATGTAACTTCGCCAAGCTATGCATGTAATATATACTAACTGGACTAGCACACGGCGAGCGCCGACAC AAGTGCCACCACGCCGGATGCACCAAGAGCTTCACGCGACACGGTAAGCTTTACCTCCCTTGCAGCATGACGAAT TTGCTAACAAACCAGACCAACTTAAACGACATTTAAGAACCACGCACAAAGAAGACATCTCACTAGGTACTCCGA TGCCGGATGACTTCGGACTTGCCTTCGCCGAAGTGGCGTGA |