© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8567.t1 |
| Gene name | |
| Location | scaffold_081:11445..14181 |
| Strand | - |
| Gene length (bp) | 2736 |
| Transcript length (bp) | 2643 |
| Coding sequence length (bp) | 2643 |
| Protein length (aa) | 881 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07573 | AreA_N | Nitrogen regulatory protein AreA N terminus | 5.5E-43 | 1 | 98 |
| PF00320 | GATA | GATA zinc finger | 3.3E-16 | 672 | 705 |
| PF08550 | DUF1752 | Fungal protein of unknown function (DUF1752) | 4.3E-12 | 109 | 136 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003677 | DNA binding | Yes |
| GO:0043565 | sequence-specific DNA binding | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0005634 | nucleus | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0042128 | nitrate assimilation | Yes |
| GO:0065007 | biological regulation | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0050789 | regulation of biological process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0042126 | nitrate metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0005488 | binding | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0008150 | biological_process | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0046872 | metal ion binding | No |
| GO:0043229 | intracellular organelle | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0005575 | cellular_component | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0043226 | organelle | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0071941 | nitrogen cycle metabolic process | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:2001057 | reactive nitrogen species metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| GATA type zinc finger |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8567.t1 MSGLTLGGGGSGGVRPTQPAAFASLQDSADADRRSSTTTSNNPLHFPPTSSQLSDDFSFGSPISPADSSNAPDSL LHDSLFPEWKVGTPRAGFDGPDEMQRKDPLATQIWKLYSRTKAQLPNQERMENLTWRMMAMSLKRKERERAQQSR SASARNSVSGPSGIAQLRLTDREPTAANPSLSTDLTSDPMNLDDFIVPFESPSDHPSPQLTKGEATSAAIPIKSR KDQVAESTPVPASFPHPPQDQRKNSEFGYVPRRVRKTSIDDRQFFNLQVPTRKRPAEASPQVPPVSNAMLAQDPD LSGGVPDYALDASSAFALHHNNHSSSHHNHTSPGMPFGLDTYGLGEDPILTSAGPYQTQFTFSPTESPMTSGNPF ANLYAHTPVASSLNSTDFFSPPQSGYQSTASTPQPAYDGEHSMFFDMPSVDARTQRRVPNYVSHRTSNLSASLQP RYMFNQNQDQSHHTGNHSSSMHSPGYPIPQPQHVDPTQVLNPNDFSTGASHAAMFSFGADSDNEDDDGNQFSDRA GLTMPGDLDDGADMNGGMQWDAQFPGSFHSLPGFTAQHRKHVTIGSADMMDTPSEWAQSGSLGRTHGSAASVSEV RNREQDPRRQKIARTTSTPNTAQLLRQSMNANTSHTSPNTPPESGLSSAVPSRPASPGGSKNGEQSSGPTTCTNC FTQTTPLWRRNPEGQPLCNACGLFLKLHGVVRPLSLKTDVIKKRNRSSANSLAVGTSRASKKSARKNSVQQTTVT TPTSSRAQSGATSSESPPAVPGGSSSGRAAGVVPIAAAPPKANPTTSSPGQSRGTSSVQMAPKRQRRLEKATDAE AGGDEASKSSTASGGRSKVVPLAPAMPPAAANPANHSIAGGQGASQEWEWLTMSL* |
| Coding | >Ani_SJS72_1|g8567.t1 ATGTCCGGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACCCGCGGCCTTTGCTTCTCTC CAGGATTCCGCCGACGCCGACCGCCGCTCCTCCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCC TCTCAACTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTCGAATGCTCCCGACAGTCTG CTTCACGATTCCCTTTTTCCGGAATGGAAGGTCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAG CGAAAGGACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCAGTTACCCAACCAAGAGCGC ATGGAGAACCTGACGTGGCGGATGATGGCAATGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGT AGTGCCTCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCTCACTGATCGCGAGCCGACC GCGGCAAATCCGTCTCTCTCCACCGACCTGACCTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAA TCTCCGTCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGCCATCCCGATCAAGTCCCGC AAGGACCAGGTGGCTGAGTCCACACCCGTGCCCGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGT GAGTTTGGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTTCTTCAACCTCCAGGTGCCC ACCCGGAAACGCCCGGCCGAGGCGTCGCCCCAGGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGAC TTGTCGGGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCATCATAATAACCATTCTTCG TCCCACCACAACCACACTTCGCCGGGCATGCCGTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTT ACTTCCGCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCATGACGTCAGGCAACCCCTTT GCCAACCTGTATGCGCACACGCCGGTGGCCTCGTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGA TACCAGTCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTTCTTCGATATGCCGTCGGTG GATGCGCGCACGCAGCGCCGGGTTCCCAACTACGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCG CGATATATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTCGTCGATGCACTCGCCGGGC TATCCCATCCCTCAGCCCCAGCACGTTGATCCCACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCT CATGCGGCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAACCAGTTCTCCGACCGTGCG GGATTGACGATGCCTGGCGATCTGGATGATGGTGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCT GGGTCCTTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGATCGGGTCCGCCGACATGATG GACACCCCCAGCGAATGGGCTCAAAGCGGCAGTCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTG CGCAACCGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCCTAATACGGCACAGCTGCTG CGGCAGAGCATGAACGCCAACACTTCACACACGTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTG CCATCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCCGACCACATGTACCAACTGC TTCACGCAGACCACCCCGTTGTGGCGGCGTAATCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTG AAGCTGCACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCGCAACCGCAGCAGCGCCAAC AGCCTGGCGGTGGGCACTTCGCGCGCGTCGAAGAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACC ACGCCGACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGCGGTGCCGGGTGGCAGTTCG TCGGGCAGAGCCGCAGGCGTGGTCCCCATCGCGGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGA CAGAGTCGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGAAAAGGCCACGGACGCGGAG GCAGGCGGCGACGAAGCCAGCAAATCGAGCACGGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCA ATGCCCCCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGCCAGCCAAGAGTGGGAATGG CTGACTATGAGTCTGTAA |
| Transcript | >Ani_SJS72_1|g8567.t1 ATGTCCGGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACCCGCGGCCTTTGCTTCTCTC CAGGATTCCGCCGACGCCGACCGCCGCTCCTCCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCC TCTCAACTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTCGAATGCTCCCGACAGTCTG CTTCACGATTCCCTTTTTCCGGAATGGAAGGTCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAG CGAAAGGACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCAGTTACCCAACCAAGAGCGC ATGGAGAACCTGACGTGGCGGATGATGGCAATGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGT AGTGCCTCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCTCACTGATCGCGAGCCGACC GCGGCAAATCCGTCTCTCTCCACCGACCTGACCTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAA TCTCCGTCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGCCATCCCGATCAAGTCCCGC AAGGACCAGGTGGCTGAGTCCACACCCGTGCCCGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGT GAGTTTGGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTTCTTCAACCTCCAGGTGCCC ACCCGGAAACGCCCGGCCGAGGCGTCGCCCCAGGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGAC TTGTCGGGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCATCATAATAACCATTCTTCG TCCCACCACAACCACACTTCGCCGGGCATGCCGTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTT ACTTCCGCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCATGACGTCAGGCAACCCCTTT GCCAACCTGTATGCGCACACGCCGGTGGCCTCGTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGA TACCAGTCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTTCTTCGATATGCCGTCGGTG GATGCGCGCACGCAGCGCCGGGTTCCCAACTACGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCG CGATATATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTCGTCGATGCACTCGCCGGGC TATCCCATCCCTCAGCCCCAGCACGTTGATCCCACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCT CATGCGGCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAACCAGTTCTCCGACCGTGCG GGATTGACGATGCCTGGCGATCTGGATGATGGTGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCT GGGTCCTTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGATCGGGTCCGCCGACATGATG GACACCCCCAGCGAATGGGCTCAAAGCGGCAGTCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTG CGCAACCGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCCTAATACGGCACAGCTGCTG CGGCAGAGCATGAACGCCAACACTTCACACACGTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTG CCATCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCCGACCACATGTACCAACTGC TTCACGCAGACCACCCCGTTGTGGCGGCGTAATCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTG AAGCTGCACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCGCAACCGCAGCAGCGCCAAC AGCCTGGCGGTGGGCACTTCGCGCGCGTCGAAGAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACC ACGCCGACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGCGGTGCCGGGTGGCAGTTCG TCGGGCAGAGCCGCAGGCGTGGTCCCCATCGCGGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGA CAGAGTCGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGAAAAGGCCACGGACGCGGAG GCAGGCGGCGACGAAGCCAGCAAATCGAGCACGGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCA ATGCCCCCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGCCAGCCAAGAGTGGGAATGG CTGACTATGAGTCTGTAA |
| Gene | >Ani_SJS72_1|g8567.t1 ATGTCCGGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACCCGCGGCCTTTGCTTCTCTC CAGGATTCCGCCGACGCCGACCGCCGCTCCTCCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCC TCTCAACTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTCGAATGCTCCCGACAGTCTG CTTCACGATTCCCTTTTTCCGGAATGGAAGGTCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAG CGAAAGGACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCAGTTACCCAACCAAGAGCGC ATGGAGAACCTGACGTGGCGGATGATGGCAATGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGG TAGGTGGAGTGCCTCGTCAACCCTCTCTGTTCCTCTCCCTCACCCCCTGCCGTCGCTCGATGGAATGCTGATCGA ACCTCGTGCGTCAATAGTAGTGCCTCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCTC ACTGATCGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACCGACCTGACCTCTGATCCTATGAACCTCGACGAT TTCATTGTTCCCTTCGAATCTCCGTCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGCC ATCCCGATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACACCCGTGCCCGCATCGTTCCCCCACCCACCCCAG GACCAGCGAAAGAACAGTGAGTTTGGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTTC TTCAACCTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCGTCGCCCCAGGTGCCGCCCGTGTCGAACGCCATG TTGGCTCAGGATCCGGACTTGTCGGGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCAT CATAATAACCATTCTTCGTCCCACCACAACCACACTTCGCCGGGCATGCCGTTTGGTCTGGATACCTACGGCCTG GGTGAAGATCCGATCCTTACTTCCGCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCATG ACGTCAGGCAACCCCTTTGCCAACCTGTATGCGCACACGCCGGTGGCCTCGTCCCTCAACTCGACCGATTTCTTC TCCCCGCCGCAGTCGGGATACCAGTCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTTC TTCGATATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTTCCCAACTACGTCTCGCACCGCACGTCGAACCTG TCTGCTTCGCTGCAACCGCGATATATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTCG TCGATGCACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCACGTTGATCCCACCCAGGTGCTCAACCCCAACGAT TTCTCGACCGGGGCTTCTCATGCGGCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAAC CAGTTCTCCGACCGTGCGGGATTGACGATGCCTGGCGATCTGGATGATGGTGCGGATATGAACGGTGGCATGCAG TGGGATGCTCAGTTCCCTGGGTCCTTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGATC GGGTCCGCCGACATGATGGACACCCCCAGCGAATGGGCTCAAAGCGGCAGTCTGGGACGCACGCATGGATCGGCC GCCTCGGTCAGCGAGGTGCGCAACCGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCCT AATACGGCACAGCTGCTGCGGCAGAGCATGAACGCCAACACTTCACACACGTCACCCAACACACCGCCAGAGTCG GGCTTGAGCAGTGCCGTGCCATCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCCG ACCACATGTACCAACTGCTTCACGCAGACCACCCCGTTGTGGCGGCGTAATCCTGAGGGCCAGCCGCTGTGTAAC GCCTGCGGGCTGTTCCTGAAGCTGCACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCGC AACCGCAGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGCGCGTCGAAGAAGTCGGCACGCAAGAACTCGGTG CAGCAGACGACGGTCACCACGCCGACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGCG GTGCCGGGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTCCCCATCGCGGCGGCGCCTCCAAAGGCGAACCCG ACGACGAGTTCTCCAGGACAGAGTCGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGAA AAGGCCACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAATCGAGCACGGCGAGCGGAGGACGGTCCAAGGTG GTGCCTCTGGCGCCGGCAATGCCCCCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGCC AGCCAAGAGTGGGAATGGCTGACTATGAGTCTGTAA |