© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8493.t1 |
| Gene name | |
| Location | scaffold_079:69360..71858 |
| Strand | - |
| Gene length (bp) | 2498 |
| Transcript length (bp) | 2448 |
| Coding sequence length (bp) | 2448 |
| Protein length (aa) | 816 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 4.6E-185 | 113 | 780 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:0005215 | transporter activity | No |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0042887 | amide transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 115 | 137 | 22 |
| 2 | 142 | 161 | 19 |
| 3 | 193 | 215 | 22 |
| 4 | 230 | 252 | 22 |
| 5 | 296 | 318 | 22 |
| 6 | 333 | 355 | 22 |
| 7 | 368 | 390 | 22 |
| 8 | 442 | 464 | 22 |
| 9 | 503 | 520 | 17 |
| 10 | 530 | 552 | 22 |
| 11 | 613 | 635 | 22 |
| 12 | 679 | 701 | 22 |
| 13 | 708 | 725 | 17 |
| 14 | 729 | 746 | 17 |
| 15 | 758 | 780 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8493.t1 MADYKDPISLSSHSDKEKADVKATKIDDTDLESLLDQLRQIVAENELDVNFPVQIIAQAREILDADTKHIDLSQL QVVISDIEKHRDLIENDSPYPEVRAVVDPTDDPDISANTFRAWFLGMIATIVFTGVNQFFTLRYPTIIIYSIVAQ LLSYPCGVFMARTLPTRQWNLFGWKFTLNPGPFNQKEHMLITVMSNVSFGGTNGTAYVTYIFQVLKAKSFYNLTS LYDQAGFQILITLSTQLLGYGCAGVVRRFLVYPPSMIYPKCLSTIALNKALHSDEGRERVHGWKISRYRFFMYCF IGMFIYYWFPGYIFQALSYFNWMNWIAPDNVKLALICGTITGLGLNPLPTFDWNIVYALYDPIIYPFYALANIGI GTILGAFCVIAPIYFSNVWKTAYFPIISNDVFDDTGNTYNVTRVLNSKGEFDLEGYEGYSQPYLTAGYSVMFFFF FAMYLATIVHVALYNRREIMKGFRALWKWASAREEHEDVHNRLMKRYKEVPEWWYLAVLAVSFVFGCIGVAKYDT GMPIWGIVFAIILCLVLQIPYGMVYAITNSEVTNNVIAEFIGGYAIPGKPVANLLFKSFGYIACAQSIQFVADLK LGHYMKIPPRVMFSAQLVATIVGAFVSLGVNVWALANIEDVCSTTQPNKFTCASARDFYTSSVIWGAIGPRRLFG SGQIYNPLLYGFLVGALLPVPFYFITKWRPRSCLRYVYIPLVFYGICNIAPYNVTYAWCPMVVGFIFNYWIKRRW QAWWEKYAYVFTTAMSCGVAISAIIIFFAVEYKEVDLNWWGNEVSYAGCDNDGCALLAIPEGGKI* |
| Coding | >Ani_SJS72_1|g8493.t1 ATGGCTGACTACAAAGATCCCATCTCCTTGAGCAGCCACTCTGATAAAGAGAAGGCTGACGTGAAAGCTACCAAG ATCGATGACACCGATCTCGAGTCTCTCCTGGATCAATTGCGGCAGATCGTGGCCGAAAATGAACTCGACGTCAAC TTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGATCCTCGATGCCGACACCAAGCATATTGATCTCTCTCAGCTG CAGGTGGTCATCTCAGATATTGAGAAGCACCGGGATCTCATCGAGAATGACTCTCCCTATCCGGAGGTGCGCGCT GTGGTTGACCCAACCGATGACCCTGATATCTCGGCCAACACTTTTCGAGCCTGGTTCCTGGGCATGATAGCTACC ATCGTCTTCACGGGCGTCAATCAGTTCTTCACTTTGCGCTATCCGACCATTATCATTTATTCCATTGTCGCTCAG TTGCTATCCTACCCCTGCGGTGTCTTCATGGCTAGGACTTTGCCTACTCGCCAGTGGAACCTGTTTGGCTGGAAG TTCACACTGAACCCTGGCCCATTCAACCAGAAGGAGCACATGCTCATCACTGTCATGTCCAATGTCTCCTTCGGC GGTACCAACGGCACAGCCTACGTGACCTACATCTTCCAGGTACTGAAAGCCAAGTCCTTCTATAACCTGACATCT CTCTACGATCAAGCCGGCTTCCAAATCCTTATTACTCTCTCCACACAACTATTGGGCTACGGCTGTGCCGGCGTG GTACGTCGATTCCTAGTATACCCGCCATCGATGATCTACCCTAAGTGCCTCTCGACCATTGCTCTGAACAAGGCA CTGCACAGCGATGAAGGCCGTGAGCGGGTCCACGGTTGGAAAATCAGCCGATACCGCTTCTTCATGTACTGCTTC ATAGGCATGTTCATCTACTACTGGTTCCCGGGGTACATCTTTCAGGCACTCTCCTACTTCAACTGGATGAACTGG ATTGCGCCAGATAACGTCAAGTTAGCCCTCATCTGTGGCACTATCACCGGGCTTGGCCTCAATCCTTTACCTACC TTTGATTGGAACATCGTCTACGCACTCTATGACCCGATTATCTACCCCTTCTACGCATTGGCCAACATCGGCATC GGTACCATCCTGGGAGCTTTCTGCGTCATCGCCCCCATATACTTCAGCAATGTGTGGAAGACCGCTTACTTCCCC ATCATCAGCAACGACGTCTTCGATGACACCGGAAACACCTACAATGTCACCCGCGTGCTGAACAGCAAGGGCGAA TTCGACCTAGAGGGTTATGAAGGCTACAGCCAGCCTTACCTGACGGCCGGGTACTCCGTGATGTTCTTCTTTTTC TTCGCCATGTACCTGGCCACGATCGTGCACGTCGCGCTCTACAACCGGCGCGAGATCATGAAGGGCTTCCGAGCC CTATGGAAGTGGGCCAGCGCGCGCGAAGAGCACGAGGACGTGCACAATCGCTTGATGAAGCGATACAAGGAGGTT CCCGAATGGTGGTACCTTGCTGTGCTGGCCGTGTCCTTTGTATTTGGCTGCATCGGCGTGGCCAAGTATGACACC GGCATGCCCATCTGGGGTATCGTCTTCGCCATCATCCTCTGTCTCGTCCTGCAAATCCCATACGGTATGGTCTAC GCCATCACCAATTCCGAAGTCACCAACAACGTTATCGCCGAGTTTATTGGCGGATACGCTATCCCCGGCAAGCCC GTCGCCAACCTTCTATTCAAATCTTTCGGATATATCGCCTGTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAAA CTGGGCCACTATATGAAGATACCCCCACGAGTGATGTTCTCTGCCCAACTGGTGGCTACCATCGTTGGGGCGTTT GTATCTCTCGGGGTGAATGTCTGGGCCCTTGCCAACATCGAGGACGTGTGCTCTACCACCCAGCCGAACAAGTTC ACTTGCGCCAGCGCCAGAGACTTCTACACTTCCTCCGTAATCTGGGGCGCCATCGGCCCACGCCGCCTCTTCGGC TCAGGGCAGATCTACAACCCTCTCCTCTACGGCTTCCTCGTCGGCGCCCTCCTCCCCGTCCCCTTCTACTTCATC ACCAAGTGGCGCCCGCGCTCCTGTCTCCGATACGTGTACATCCCACTCGTATTCTACGGGATCTGCAATATCGCG CCCTACAATGTCACGTACGCGTGGTGTCCGATGGTGGTGGGGTTCATTTTCAATTACTGGATTAAGAGACGGTGG CAGGCGTGGTGGGAGAAGTACGCGTATGTGTTCACGACGGCGATGTCGTGCGGAGTGGCTATCTCGGCGATTATT ATTTTCTTTGCCGTCGAATATAAGGAGGTCGATTTGAATTGGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGAT AATGATGGGTGTGCGCTGTTGGCGATTCCCGAGGGGGGGAAGATTTAA |
| Transcript | >Ani_SJS72_1|g8493.t1 ATGGCTGACTACAAAGATCCCATCTCCTTGAGCAGCCACTCTGATAAAGAGAAGGCTGACGTGAAAGCTACCAAG ATCGATGACACCGATCTCGAGTCTCTCCTGGATCAATTGCGGCAGATCGTGGCCGAAAATGAACTCGACGTCAAC TTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGATCCTCGATGCCGACACCAAGCATATTGATCTCTCTCAGCTG CAGGTGGTCATCTCAGATATTGAGAAGCACCGGGATCTCATCGAGAATGACTCTCCCTATCCGGAGGTGCGCGCT GTGGTTGACCCAACCGATGACCCTGATATCTCGGCCAACACTTTTCGAGCCTGGTTCCTGGGCATGATAGCTACC ATCGTCTTCACGGGCGTCAATCAGTTCTTCACTTTGCGCTATCCGACCATTATCATTTATTCCATTGTCGCTCAG TTGCTATCCTACCCCTGCGGTGTCTTCATGGCTAGGACTTTGCCTACTCGCCAGTGGAACCTGTTTGGCTGGAAG TTCACACTGAACCCTGGCCCATTCAACCAGAAGGAGCACATGCTCATCACTGTCATGTCCAATGTCTCCTTCGGC GGTACCAACGGCACAGCCTACGTGACCTACATCTTCCAGGTACTGAAAGCCAAGTCCTTCTATAACCTGACATCT CTCTACGATCAAGCCGGCTTCCAAATCCTTATTACTCTCTCCACACAACTATTGGGCTACGGCTGTGCCGGCGTG GTACGTCGATTCCTAGTATACCCGCCATCGATGATCTACCCTAAGTGCCTCTCGACCATTGCTCTGAACAAGGCA CTGCACAGCGATGAAGGCCGTGAGCGGGTCCACGGTTGGAAAATCAGCCGATACCGCTTCTTCATGTACTGCTTC ATAGGCATGTTCATCTACTACTGGTTCCCGGGGTACATCTTTCAGGCACTCTCCTACTTCAACTGGATGAACTGG ATTGCGCCAGATAACGTCAAGTTAGCCCTCATCTGTGGCACTATCACCGGGCTTGGCCTCAATCCTTTACCTACC TTTGATTGGAACATCGTCTACGCACTCTATGACCCGATTATCTACCCCTTCTACGCATTGGCCAACATCGGCATC GGTACCATCCTGGGAGCTTTCTGCGTCATCGCCCCCATATACTTCAGCAATGTGTGGAAGACCGCTTACTTCCCC ATCATCAGCAACGACGTCTTCGATGACACCGGAAACACCTACAATGTCACCCGCGTGCTGAACAGCAAGGGCGAA TTCGACCTAGAGGGTTATGAAGGCTACAGCCAGCCTTACCTGACGGCCGGGTACTCCGTGATGTTCTTCTTTTTC TTCGCCATGTACCTGGCCACGATCGTGCACGTCGCGCTCTACAACCGGCGCGAGATCATGAAGGGCTTCCGAGCC CTATGGAAGTGGGCCAGCGCGCGCGAAGAGCACGAGGACGTGCACAATCGCTTGATGAAGCGATACAAGGAGGTT CCCGAATGGTGGTACCTTGCTGTGCTGGCCGTGTCCTTTGTATTTGGCTGCATCGGCGTGGCCAAGTATGACACC GGCATGCCCATCTGGGGTATCGTCTTCGCCATCATCCTCTGTCTCGTCCTGCAAATCCCATACGGTATGGTCTAC GCCATCACCAATTCCGAAGTCACCAACAACGTTATCGCCGAGTTTATTGGCGGATACGCTATCCCCGGCAAGCCC GTCGCCAACCTTCTATTCAAATCTTTCGGATATATCGCCTGTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAAA CTGGGCCACTATATGAAGATACCCCCACGAGTGATGTTCTCTGCCCAACTGGTGGCTACCATCGTTGGGGCGTTT GTATCTCTCGGGGTGAATGTCTGGGCCCTTGCCAACATCGAGGACGTGTGCTCTACCACCCAGCCGAACAAGTTC ACTTGCGCCAGCGCCAGAGACTTCTACACTTCCTCCGTAATCTGGGGCGCCATCGGCCCACGCCGCCTCTTCGGC TCAGGGCAGATCTACAACCCTCTCCTCTACGGCTTCCTCGTCGGCGCCCTCCTCCCCGTCCCCTTCTACTTCATC ACCAAGTGGCGCCCGCGCTCCTGTCTCCGATACGTGTACATCCCACTCGTATTCTACGGGATCTGCAATATCGCG CCCTACAATGTCACGTACGCGTGGTGTCCGATGGTGGTGGGGTTCATTTTCAATTACTGGATTAAGAGACGGTGG CAGGCGTGGTGGGAGAAGTACGCGTATGTGTTCACGACGGCGATGTCGTGCGGAGTGGCTATCTCGGCGATTATT ATTTTCTTTGCCGTCGAATATAAGGAGGTCGATTTGAATTGGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGAT AATGATGGGTGTGCGCTGTTGGCGATTCCCGAGGGGGGGAAGATTTAA |
| Gene | >Ani_SJS72_1|g8493.t1 ATGGCTGACTACAAAGATCCCATCTCCTTGAGCAGCCACTCTGATAAAGAGAAGGCTGACGTGAAAGCTACCAAG ATCGATGACACCGATCTCGAGTCTCTCCTGGATCAATTGCGGCAGATCGTGGCCGAAAATGAACTCGACGTCAAC TTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGATCCTCGATGCCGACACCAAGCATATTGATCTCTCTCAGCTG CAGGTGGTCATCTCAGATATTGAGAAGCACCGGGATCTCATCGAGAATGACTCTCCCTATCCGGAGGTGCGCGCT GTGGTTGACCCAACCGATGACCCTGATATCTCGGCCAACACTTTTCGAGCCTGGTTCCTGGGCATGATAGCTACC ATCGTCTTCACGGGCGTCAATCAGTTCTTCACTTTGCGCTATCCGACCATTATCATTTATTCCATTGTCGCTCAG TTGCTATCCTACCCCTGCGGTGTCTTCATGGCTAGGACTTTGCCTACTCGCCAGTGGAACCTGTTTGGCTGGAAG TTCACACTGAACCCTGGCCCATTCAACCAGAAGGAGCACATGCTCATCACTGTCATGTCCAATGTCTCCTTCGGC GGTACCAACGGCACAGCCTACGTGACCTACATCTTCCAGGTACTGAAAGCCAAGTCCTTCTATAACCTGACATCT CTCTACGATCAAGCCGGCTTCCAAATCCTTATTACTCTCTCCACACAACTATTGGGCTACGGCTGTGCCGGCGTG GTACGTCGATTCCTAGTATACCCGCCATCGATGATCTACCCTAAGTGCCTCTCGACCATTGCTCTGAACAAGGCA CTGCACAGCGATGAAGGCCGTGAGCGGGTCCACGGTTGGAAAATCAGCCGATACCGCTTCTTCATGTACTGCTTC ATAGGCATGTTCATCTACTACTGGTTCCCGGGGTACATCTTTCAGGCACTCTCCTACTTCAACTGGATGAACTGG ATTGCGCCAGATAACGTCAAGTTAGCCCTCATCTGTGGCACTATCACCGGGCTTGGCCTCAATCCTTTACCTACC TTTGATTGGAACATCGTCTACGCACTCTATGACCCGATTATCTACCCCTTCTACGCATTGGCCAACATCGGCATC GGTACCATCCTGGGAGCTTTCTGCGTCATCGCCCCCATATACTTCAGCAATGTGTGGAAGACCGCTTACTTCCCC ATCATCAGCAACGACGTCTTCGATGACACCGGAAACACCTACAATGTCACCCGCGTGCTGAACAGCAAGGGCGAA TTCGACCTAGAGGGTTATGAAGGCTACAGCCAGCCTTACCTGACGGCCGGGTACTCCGTGATGTTCTTCTTTTTC TTCGCCATGTACCTGGCCACGATCGTGCACGTCGCGCTCTACAACCGGCGCGAGATCATGAAGGGCTTCCGAGCC CTATGGAAGTGGGCCAGCGCGCGCGAAGAGCACGAGGACGTGCACAATCGCTTGATGAAGCGATACAAGGAGGTT CCCGAATGGTGGTACCTTGCTGTGCTGGCCGTGTCCTTTGTATTTGGCTGCATCGGCGTGGCCAAGTATGACACC GGCATGCCCATCTGGGGTATCGTCTTCGCCATCATCCTCTGTCTCGTCCTGCAAATCCCATACGGTATGGTCTAC GCCATCACCAATTCCGAAGTCACCAACAACGTTATCGCCGAGTTTATTGGCGGATACGCTATCCCCGGCAAGCCC GTCGCCAACCTTCTATTCAAATCTTTCGGATATATCGCCTGTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAAA CTGGGCCACTATATGAAGATACCCCCACGAGTGATGTTCTCTGCCCAACTGGTGGCTACCATCGTTGGGGCGTTT GTATCTCTCGGGGTGAATGTCTGGGCCCTTGCCAACATCGAGGACGTGTGCTCTACCACCCAGCCGAACAAGTTC ACTTGCGCCAGTAAGCTACCCCTCCTTCTCATATCCCCACATACCTAACTAAGTTCATAGGCGCCAGAGACTTCT ACACTTCCTCCGTAATCTGGGGCGCCATCGGCCCACGCCGCCTCTTCGGCTCAGGGCAGATCTACAACCCTCTCC TCTACGGCTTCCTCGTCGGCGCCCTCCTCCCCGTCCCCTTCTACTTCATCACCAAGTGGCGCCCGCGCTCCTGTC TCCGATACGTGTACATCCCACTCGTATTCTACGGGATCTGCAATATCGCGCCCTACAATGTCACGTACGCGTGGT GTCCGATGGTGGTGGGGTTCATTTTCAATTACTGGATTAAGAGACGGTGGCAGGCGTGGTGGGAGAAGTACGCGT ATGTGTTCACGACGGCGATGTCGTGCGGAGTGGCTATCTCGGCGATTATTATTTTCTTTGCCGTCGAATATAAGG AGGTCGATTTGAATTGGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGATAATGATGGGTGTGCGCTGTTGGCGA TTCCCGAGGGGGGGAAGATTTAA |