© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8492.t1 |
| Gene name | |
| Location | scaffold_079:67317..68721 |
| Strand | + |
| Gene length (bp) | 1404 |
| Transcript length (bp) | 1404 |
| Coding sequence length (bp) | 1404 |
| Protein length (aa) | 468 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 49 | 71 | 22 |
| 2 | 122 | 144 | 22 |
| 3 | 151 | 173 | 22 |
| 4 | 275 | 297 | 22 |
| 5 | 373 | 395 | 22 |
| 6 | 415 | 437 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8492.t1 MSQTSEAPLFVVEEVICAYPISTFYDSCPRYLFYALLLATCVTRWTGWLADVFLGAAATYAGTAAIQAFILVSNP AKRNPYESITIPFVPDNTSLWDSFPSLITGADHIELSPAALELDADAVLAIVVTAYLTFLPLQCWSRAFSHERAR YILFALWHVLMLAGSICALVYWPTLRDTPIQYTFCYPDLPPMGTVSSDGWESWQRTSTWNNSVWEIFSNSTMFDQ LPGVCFYPCFNTTQILRQQTTLEATVATGDYRIHQRSKFWNEVVYSKRYIYSLIVLTVVVNFFLLLFKIIPYRSR LPSAQVRSIWAERKSIFNGLRKDFRSAIYVSQLHRTDLMDSTREKLSVWRPAGGLFTLHALGSWFRLLLDTVILC ALVFSIIVSPLTVIAFVVWIEYYIHEDGPSQETPQQVGQWSPLVSIGFLLISAAILKLKYWVASREELEEEIGHL RGKLKRLERLREEKVYE* |
| Coding | >Ani_SJS72_1|g8492.t1 ATGAGCCAGACAAGCGAGGCGCCTCTCTTCGTAGTGGAAGAGGTCATCTGCGCCTACCCCATCAGCACCTTCTAC GACTCGTGTCCGCGCTATCTCTTCTATGCCCTCCTTCTAGCCACTTGTGTCACTCGCTGGACCGGCTGGCTCGCG GACGTTTTCCTGGGTGCGGCAGCAACATACGCCGGAACCGCTGCCATCCAAGCATTCATTCTCGTCTCCAATCCG GCGAAACGCAACCCATACGAATCCATAACAATTCCTTTCGTCCCTGATAACACCTCGCTGTGGGACAGCTTCCCA TCTCTAATCACTGGAGCCGATCATATCGAACTAAGTCCGGCTGCACTTGAGTTAGATGCTGACGCCGTCCTGGCC ATCGTAGTCACGGCTTATCTCACATTCCTCCCTCTGCAGTGCTGGTCCCGTGCCTTTTCCCACGAAAGGGCCCGC TATATACTCTTCGCTCTATGGCATGTCCTCATGCTCGCGGGGTCCATCTGTGCCCTGGTTTATTGGCCGACTCTT CGCGATACCCCTATTCAATACACTTTCTGCTACCCGGATCTTCCACCCATGGGCACCGTCTCTAGCGATGGATGG GAGTCCTGGCAGCGCACCTCAACCTGGAACAACAGTGTCTGGGAGATATTCAGCAATAGTACCATGTTCGACCAG CTACCAGGCGTCTGCTTCTATCCCTGCTTCAACACAACTCAAATTCTGCGCCAACAGACCACACTCGAGGCGACC GTCGCCACGGGCGACTACCGCATCCACCAACGAAGCAAATTCTGGAATGAGGTCGTCTACTCCAAACGTTACATA TACAGTCTTATCGTCCTCACTGTTGTCGTTAACTTCTTCCTTCTGTTATTCAAGATCATCCCATATCGCTCTCGT CTTCCCTCCGCCCAAGTACGCAGCATCTGGGCAGAAAGGAAGAGCATCTTCAACGGGTTGAGGAAGGACTTTCGC TCCGCGATCTACGTATCTCAGCTTCATCGAACCGATCTGATGGACTCGACGAGAGAGAAGCTCTCGGTGTGGAGA CCTGCTGGAGGTCTCTTTACATTACACGCCTTGGGCTCGTGGTTCAGACTTCTACTTGATACGGTGATCCTCTGT GCGTTGGTATTTAGCATCATCGTGAGCCCGTTGACGGTCATTGCTTTCGTGGTTTGGATTGAGTATTATATCCAC GAGGATGGACCGTCGCAGGAAACACCACAGCAAGTAGGACAGTGGTCGCCATTGGTGTCTATTGGGTTTTTGTTG ATATCCGCGGCCATATTGAAGCTGAAGTATTGGGTGGCTTCGAGGGAAGAGTTGGAGGAGGAGATCGGGCATTTG AGGGGGAAGTTGAAACGGTTGGAAAGGCTTAGAGAAGAGAAAGTGTATGAGTAG |
| Transcript | >Ani_SJS72_1|g8492.t1 ATGAGCCAGACAAGCGAGGCGCCTCTCTTCGTAGTGGAAGAGGTCATCTGCGCCTACCCCATCAGCACCTTCTAC GACTCGTGTCCGCGCTATCTCTTCTATGCCCTCCTTCTAGCCACTTGTGTCACTCGCTGGACCGGCTGGCTCGCG GACGTTTTCCTGGGTGCGGCAGCAACATACGCCGGAACCGCTGCCATCCAAGCATTCATTCTCGTCTCCAATCCG GCGAAACGCAACCCATACGAATCCATAACAATTCCTTTCGTCCCTGATAACACCTCGCTGTGGGACAGCTTCCCA TCTCTAATCACTGGAGCCGATCATATCGAACTAAGTCCGGCTGCACTTGAGTTAGATGCTGACGCCGTCCTGGCC ATCGTAGTCACGGCTTATCTCACATTCCTCCCTCTGCAGTGCTGGTCCCGTGCCTTTTCCCACGAAAGGGCCCGC TATATACTCTTCGCTCTATGGCATGTCCTCATGCTCGCGGGGTCCATCTGTGCCCTGGTTTATTGGCCGACTCTT CGCGATACCCCTATTCAATACACTTTCTGCTACCCGGATCTTCCACCCATGGGCACCGTCTCTAGCGATGGATGG GAGTCCTGGCAGCGCACCTCAACCTGGAACAACAGTGTCTGGGAGATATTCAGCAATAGTACCATGTTCGACCAG CTACCAGGCGTCTGCTTCTATCCCTGCTTCAACACAACTCAAATTCTGCGCCAACAGACCACACTCGAGGCGACC GTCGCCACGGGCGACTACCGCATCCACCAACGAAGCAAATTCTGGAATGAGGTCGTCTACTCCAAACGTTACATA TACAGTCTTATCGTCCTCACTGTTGTCGTTAACTTCTTCCTTCTGTTATTCAAGATCATCCCATATCGCTCTCGT CTTCCCTCCGCCCAAGTACGCAGCATCTGGGCAGAAAGGAAGAGCATCTTCAACGGGTTGAGGAAGGACTTTCGC TCCGCGATCTACGTATCTCAGCTTCATCGAACCGATCTGATGGACTCGACGAGAGAGAAGCTCTCGGTGTGGAGA CCTGCTGGAGGTCTCTTTACATTACACGCCTTGGGCTCGTGGTTCAGACTTCTACTTGATACGGTGATCCTCTGT GCGTTGGTATTTAGCATCATCGTGAGCCCGTTGACGGTCATTGCTTTCGTGGTTTGGATTGAGTATTATATCCAC GAGGATGGACCGTCGCAGGAAACACCACAGCAAGTAGGACAGTGGTCGCCATTGGTGTCTATTGGGTTTTTGTTG ATATCCGCGGCCATATTGAAGCTGAAGTATTGGGTGGCTTCGAGGGAAGAGTTGGAGGAGGAGATCGGGCATTTG AGGGGGAAGTTGAAACGGTTGGAAAGGCTTAGAGAAGAGAAAGTGTATGAGTAG |
| Gene | >Ani_SJS72_1|g8492.t1 ATGAGCCAGACAAGCGAGGCGCCTCTCTTCGTAGTGGAAGAGGTCATCTGCGCCTACCCCATCAGCACCTTCTAC GACTCGTGTCCGCGCTATCTCTTCTATGCCCTCCTTCTAGCCACTTGTGTCACTCGCTGGACCGGCTGGCTCGCG GACGTTTTCCTGGGTGCGGCAGCAACATACGCCGGAACCGCTGCCATCCAAGCATTCATTCTCGTCTCCAATCCG GCGAAACGCAACCCATACGAATCCATAACAATTCCTTTCGTCCCTGATAACACCTCGCTGTGGGACAGCTTCCCA TCTCTAATCACTGGAGCCGATCATATCGAACTAAGTCCGGCTGCACTTGAGTTAGATGCTGACGCCGTCCTGGCC ATCGTAGTCACGGCTTATCTCACATTCCTCCCTCTGCAGTGCTGGTCCCGTGCCTTTTCCCACGAAAGGGCCCGC TATATACTCTTCGCTCTATGGCATGTCCTCATGCTCGCGGGGTCCATCTGTGCCCTGGTTTATTGGCCGACTCTT CGCGATACCCCTATTCAATACACTTTCTGCTACCCGGATCTTCCACCCATGGGCACCGTCTCTAGCGATGGATGG GAGTCCTGGCAGCGCACCTCAACCTGGAACAACAGTGTCTGGGAGATATTCAGCAATAGTACCATGTTCGACCAG CTACCAGGCGTCTGCTTCTATCCCTGCTTCAACACAACTCAAATTCTGCGCCAACAGACCACACTCGAGGCGACC GTCGCCACGGGCGACTACCGCATCCACCAACGAAGCAAATTCTGGAATGAGGTCGTCTACTCCAAACGTTACATA TACAGTCTTATCGTCCTCACTGTTGTCGTTAACTTCTTCCTTCTGTTATTCAAGATCATCCCATATCGCTCTCGT CTTCCCTCCGCCCAAGTACGCAGCATCTGGGCAGAAAGGAAGAGCATCTTCAACGGGTTGAGGAAGGACTTTCGC TCCGCGATCTACGTATCTCAGCTTCATCGAACCGATCTGATGGACTCGACGAGAGAGAAGCTCTCGGTGTGGAGA CCTGCTGGAGGTCTCTTTACATTACACGCCTTGGGCTCGTGGTTCAGACTTCTACTTGATACGGTGATCCTCTGT GCGTTGGTATTTAGCATCATCGTGAGCCCGTTGACGGTCATTGCTTTCGTGGTTTGGATTGAGTATTATATCCAC GAGGATGGACCGTCGCAGGAAACACCACAGCAAGTAGGACAGTGGTCGCCATTGGTGTCTATTGGGTTTTTGTTG ATATCCGCGGCCATATTGAAGCTGAAGTATTGGGTGGCTTCGAGGGAAGAGTTGGAGGAGGAGATCGGGCATTTG AGGGGGAAGTTGAAACGGTTGGAAAGGCTTAGAGAAGAGAAAGTGTATGAGTAG |