© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8471.t1 |
| Gene name | |
| Location | scaffold_079:6895..8108 |
| Strand | + |
| Gene length (bp) | 1213 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04193 | PQ-loop | PQ loop repeat | 1.5E-06 | 9 | 49 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 22 | 17 |
| 2 | 42 | 64 | 22 |
| 3 | 84 | 106 | 22 |
| 4 | 118 | 140 | 22 |
| 5 | 163 | 185 | 22 |
| 6 | 244 | 261 | 17 |
| 7 | 294 | 316 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8471.t1 MGLTIVFPFSVIILALTWASFVPQIKHVWQTKDSRGISTAYLLFNLLCITEHVFFHSLDIAYLWDVSKFPSAPVS VSPLDWVNLAQVLGDWVLSNVLFALCLSYSPPTRPHRRLRTLLVLALYCFFLLFTLVPLILDLTTDVFCPPNHPH DCLLPERDVVPFLRGIHCYFLLPLTTVILPVLGIFKQVQRQRRQLQQGQRGRQQQQQQQEEEEPREQAMRIPPSH PPTPTTPTDLNGLLARSRLFQAAIFALSAILWIFRLPPGQQEREDDPPPPDAPLLPRPWLLVFLHWWMFMGYMTV DEAIFAIGQGVLGYLALRKAAEADGRSEGEEAERRPLLVAAEERSTYESAS* |
| Coding | >Ani_SJS72_1|g8471.t1 ATGGGGCTGACTATTGTTTTCCCTTTCAGTGTGATCATCCTTGCCCTAACCTGGGCCTCCTTCGTCCCCCAGATC AAGCATGTGTGGCAGACGAAAGACAGCAGGGGCATCTCCACTGCCTACCTCCTTTTCAATCTGCTCTGCATCACC GAGCATGTCTTCTTTCACTCCCTTGACATAGCCTATCTTTGGGATGTCTCCAAATTCCCCTCGGCGCCGGTCTCT GTCTCCCCCTTGGACTGGGTCAATCTCGCTCAAGTATTAGGGGACTGGGTATTGTCCAACGTTTTGTTCGCGCTG TGTCTCTCCTACTCCCCTCCGACCCGCCCCCATCGTCGTCTGCGAACTCTCTTGGTCCTCGCTCTCTATTGCTTC TTCCTGCTGTTCACTCTGGTCCCGCTCATCTTAGACCTCACCACCGACGTCTTTTGCCCACCGAACCATCCGCAC GATTGCCTGCTACCGGAGCGGGACGTAGTCCCTTTCCTCCGCGGCATCCACTGCTACTTTCTATTACCACTCACG ACGGTGATTCTCCCTGTTCTGGGCATCTTTAAGCAGGTACAGCGCCAGAGGCGACAACTACAGCAAGGACAACGA GGAAGACAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGCCCCGCGAACAGGCCATGAGGATACCTCCGTCTCAT CCCCCAACACCGACCACCCCTACAGATCTTAACGGCCTTCTTGCCCGCTCCCGTCTTTTCCAGGCTGCTATCTTC GCGCTCTCAGCCATCCTCTGGATCTTTCGCTTGCCCCCAGGGCAGCAGGAACGTGAGGACGATCCGCCGCCGCCC GATGCTCCTCTCTTACCCCGGCCCTGGCTGTTGGTCTTCTTGCACTGGTGGATGTTCATGGGGTATATGACCGTT GATGAGGCCATTTTCGCGATCGGGCAGGGTGTGTTGGGGTACTTGGCTCTACGGAAGGCGGCAGAAGCAGATGGG AGAAGTGAAGGTGAGGAGGCGGAGAGAAGGCCGTTGTTGGTAGCGGCCGAGGAACGTTCCACATATGAATCTGCA AGTTGA |
| Transcript | >Ani_SJS72_1|g8471.t1 ATGGGGCTGACTATTGTTTTCCCTTTCAGTGTGATCATCCTTGCCCTAACCTGGGCCTCCTTCGTCCCCCAGATC AAGCATGTGTGGCAGACGAAAGACAGCAGGGGCATCTCCACTGCCTACCTCCTTTTCAATCTGCTCTGCATCACC GAGCATGTCTTCTTTCACTCCCTTGACATAGCCTATCTTTGGGATGTCTCCAAATTCCCCTCGGCGCCGGTCTCT GTCTCCCCCTTGGACTGGGTCAATCTCGCTCAAGTATTAGGGGACTGGGTATTGTCCAACGTTTTGTTCGCGCTG TGTCTCTCCTACTCCCCTCCGACCCGCCCCCATCGTCGTCTGCGAACTCTCTTGGTCCTCGCTCTCTATTGCTTC TTCCTGCTGTTCACTCTGGTCCCGCTCATCTTAGACCTCACCACCGACGTCTTTTGCCCACCGAACCATCCGCAC GATTGCCTGCTACCGGAGCGGGACGTAGTCCCTTTCCTCCGCGGCATCCACTGCTACTTTCTATTACCACTCACG ACGGTGATTCTCCCTGTTCTGGGCATCTTTAAGCAGGTACAGCGCCAGAGGCGACAACTACAGCAAGGACAACGA GGAAGACAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGCCCCGCGAACAGGCCATGAGGATACCTCCGTCTCAT CCCCCAACACCGACCACCCCTACAGATCTTAACGGCCTTCTTGCCCGCTCCCGTCTTTTCCAGGCTGCTATCTTC GCGCTCTCAGCCATCCTCTGGATCTTTCGCTTGCCCCCAGGGCAGCAGGAACGTGAGGACGATCCGCCGCCGCCC GATGCTCCTCTCTTACCCCGGCCCTGGCTGTTGGTCTTCTTGCACTGGTGGATGTTCATGGGGTATATGACCGTT GATGAGGCCATTTTCGCGATCGGGCAGGGTGTGTTGGGGTACTTGGCTCTACGGAAGGCGGCAGAAGCAGATGGG AGAAGTGAAGGTGAGGAGGCGGAGAGAAGGCCGTTGTTGGTAGCGGCCGAGGAACGTTCCACATATGAATCTGCA AGTTGA |
| Gene | >Ani_SJS72_1|g8471.t1 ATGGGGCTGACTATTGTTTTCCCTTTCAGTGTGTATGATATTTTCCAGCCAAGATGTCTTTCCCTTGTTGTGATG TATTTCTATTGCTGACCAAGGATAAAACAGGATCATCCTTGCCCTAACCTGGGCCTCCTTCGTCCCCCAGATCAA GCATGTGTGGCAGACGAAAGACAGCAGGGGCATCTCCACTGCCTACCTCCTTTTCAATCTGCTCTGCATCACCGA GCATGTCTTCTTTCACTCCCTTGACATAGCCTATCTTTGGGATGTCTCCAAATTCCCCTCGGCGCCGGTCTCTGT CTCCCCCTTGGACTGGGTCAATCTCGCTCAAGTATTAGGGGACTGGGTATTGTCCAACGTTTTGTAAGCCCAACC CACCAGCCCCATCACCACAGCTCGCTGTAATGCCTACCACCCGGCTGACTTCTGTAAATGCAACAACCCTAGGTT CGCGCTGTGTCTCTCCTACTCCCCTCCGACCCGCCCCCATCGTCGTCTGCGAACTCTCTTGGTCCTCGCTCTCTA TTGCTTCTTCCTGCTGTTCACTCTGGTCCCGCTCATCTTAGACCTCACCACCGACGTCTTTTGCCCACCGAACCA TCCGCACGATTGCCTGCTACCGGAGCGGGACGTAGTCCCTTTCCTCCGCGGCATCCACTGCTACTTTCTATTACC ACTCACGACGGTGATTCTCCCTGTTCTGGGCATCTTTAAGCAGGTACAGCGCCAGAGGCGACAACTACAGCAAGG ACAACGAGGAAGACAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGCCCCGCGAACAGGCCATGAGGATACCTCC GTCTCATCCCCCAACACCGACCACCCCTACAGATCTTAACGGCCTTCTTGCCCGCTCCCGTCTTTTCCAGGCTGC TATCTTCGCGCTCTCAGCCATCCTCTGGATCTTTCGCTTGCCCCCAGGGCAGCAGGAACGTGAGGACGATCCGCC GCCGCCCGATGCTCCTCTCTTACCCCGGCCCTGGCTGTTGGTCTTCTTGCACTGGTGGATGTTCATGGGGTATAT GACCGTTGATGAGGCCATTTTCGCGATCGGGCAGGGTGTGTTGGGGTACTTGGCTCTACGGAAGGCGGCAGAAGC AGATGGGAGAAGTGAAGGTGAGGAGGCGGAGAGAAGGCCGTTGTTGGTAGCGGCCGAGGAACGTTCCACATATGA ATCTGCAAGTTGA |