© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8468.t1 |
| Gene name | |
| Location | scaffold_078:146690..148398 |
| Strand | - |
| Gene length (bp) | 1708 |
| Transcript length (bp) | 1548 |
| Coding sequence length (bp) | 1548 |
| Protein length (aa) | 516 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.0E-77 | 46 | 483 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.4E-12 | 69 | 311 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 103 | 122 | 19 |
| 4 | 132 | 154 | 22 |
| 5 | 161 | 183 | 22 |
| 6 | 198 | 215 | 17 |
| 7 | 284 | 306 | 22 |
| 8 | 321 | 343 | 22 |
| 9 | 350 | 372 | 22 |
| 10 | 382 | 404 | 22 |
| 11 | 424 | 446 | 22 |
| 12 | 450 | 469 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8468.t1 MNTPVTPKFGDQELASVLPAVTWWRSPHLRKVNLFMVILSLFSSPGGFDGSLVNGLQAMPEWVNFMEKPSSTWLG FINAVYWVGALISTPVAAWTCNRYGRRVGVWVGVIFLISGATMGTAASSANVFTASRAVIGCGMGWVSNAAPILL SEIAYPAHRGVFGALYMVGYYLGAAVAAWVTFATQAYDGPWGWKLPVLLQLLLPLIAVPGLAFIPESPRWLISRG RIEKARRILAELHTGGDTTSPLIAYEVQNIQEIIRAEYNAAASAGSMSVIKSPGNRHRLFITITLGVFAQFSGNG VVSYYLTVILRSVGVTQTRDQLLISACLQVWNVLFAAVGASLVDQIGRRILFITSASIMLTAFILISGLSGAFAT SGNGPVGIAVIPFLFIYFLGYDIALTPMFTAYTCEIWPFGLRSRGLSIVWLSAMGCTVFNTFVNPVALSAIHWKY YFVFVAVLVGYWFTAYFFYPETRGYSLEHIAGIFDGKDAKVKQGIEEKTKPMAGPVATESEDVHG* |
| Coding | >Ani_SJS72_1|g8468.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGTCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTCTTCTCCGGGCGGGTTCGATGGC TCCTTGGTCAATGGCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGC TTCATCAATGCGGTGTACTGGGTTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGC CGGCGGGTAGGAGTCTGGGTTGGGGTTATTTTTCTAATATCCGGAGCAACAATGGGCACTGCTGCGTCGTCCGCC AACGTCTTCACTGCGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTC AGTGAGATCGCCTACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCC GTCGCGGCGTGGGTCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGGCTGGAAATTGCCGGTTCTTCTACAG CTCCTCCTTCCTCTCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGA CGTATCGAGAAAGCTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTAC GAAGTCCAGAATATTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATC AAGTCCCCGGGAAACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGG GTAGTCTCCTACTACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCC GCCTGCCTGCAAGTCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATT TTGTTCATAACCTCAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGTTGTCGGGCGCCTTTGCCACC AGTGGCAACGGTCCAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTA ACGCCTATGTTCACTGCGTATACATGCGAAATCTGGCCCTTTGGCCTCCGCTCACGGGGACTCAGTATCGTATGG CTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGGTCGCCCTTTCGGCCATCCACTGGAAATAC TATTTCGTGTTCGTGGCCGTGTTGGTTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAACTCGCGGATAC AGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGAGAAAACCAAG CCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGGGTAA |
| Transcript | >Ani_SJS72_1|g8468.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGTCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTCTTCTCCGGGCGGGTTCGATGGC TCCTTGGTCAATGGCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGC TTCATCAATGCGGTGTACTGGGTTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGC CGGCGGGTAGGAGTCTGGGTTGGGGTTATTTTTCTAATATCCGGAGCAACAATGGGCACTGCTGCGTCGTCCGCC AACGTCTTCACTGCGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTC AGTGAGATCGCCTACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCC GTCGCGGCGTGGGTCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGGCTGGAAATTGCCGGTTCTTCTACAG CTCCTCCTTCCTCTCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGA CGTATCGAGAAAGCTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTAC GAAGTCCAGAATATTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATC AAGTCCCCGGGAAACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGG GTAGTCTCCTACTACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCC GCCTGCCTGCAAGTCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATT TTGTTCATAACCTCAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGTTGTCGGGCGCCTTTGCCACC AGTGGCAACGGTCCAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTA ACGCCTATGTTCACTGCGTATACATGCGAAATCTGGCCCTTTGGCCTCCGCTCACGGGGACTCAGTATCGTATGG CTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGGTCGCCCTTTCGGCCATCCACTGGAAATAC TATTTCGTGTTCGTGGCCGTGTTGGTTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAACTCGCGGATAC AGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGAGAAAACCAAG CCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGGGTAA |
| Gene | >Ani_SJS72_1|g8468.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGTCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTGTAAGTCACATACCTTCCTCTAC AATCTTGCATTGATGGCATTCCTAACTGAGCAGCCATAGCTTCTCCGGGCGGGTTCGATGGCTCCTTGGTCAATG GCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGCTTCATCAATGCGG TGTACTGGGTTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGCCGGCGGGTAGGAG TCTGGGTTGGGGTTATTTTTCTAATATCCGGAGCAACAATGGGCACTGCTGCGTCGTCCGCCAACGTCTTCACTG CGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTCAGTGAGATCGCCT ACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCCGTCGCGGCGTGGG TCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGGCTGGAAATTGCCGGTTCTTCTACAGCTCCTCCTTCCTC TCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGACGTATCGAGAAAG CTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTACGAAGTCCAGAATA TTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATCAAGTCCCCGGGAA ACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGGGTAGTCTCCTACT ACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCCGCCTGCCTGCAAG TCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATTTTGTTCATAACCT CAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGTTGTCGGGCGCCTTTGCCACCAGTGGCAACGGTC CAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTGTAGGTGTTTCAGC AAGCCATACATCCCATGCTCCTCTATGCTCCTCTATTGTGATTATTTTCCCTTGATGTATGCCCGGACTAATGCT TGCTGCTAGAACGCCTATGTTCACTGCGTATACATGCGAAATCTGGCCCTTTGGCCTCCGCTCACGGGGACTCAG TATCGTATGGCTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGGTCGCCCTTTCGGCCATCCA CTGGAAATACTATTTCGTGTTCGTGGCCGTGTTGGTTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAAC TCGCGGATACAGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGA GAAAACCAAGCCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGGGTAA |