Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g8442.t1
Gene name
Locationscaffold_078:84757..85855
Strand+
Gene length (bp)1098
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 5.8E-05 39 260

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g8442.t1
MAPSRVDTPEPIPSPAPGKLQSIQTQQPQYGDFRDDFFRDGYAVIKGVLSKERASEYQSEALTWLESFGLGFDRN
DKSTWKKENLPQSWKGGMYLHFSAAHEKYVWDVRCEPDVIAPFAKLWGTDELVVSFDTVNITLPQSIVGAYDSQP
WPHCDQAPERKGLVCVQGIVNLSNSGPDDGGLIVMKGSAPLFDQFFEENPVTGPTPWRTAKHKDFHPFHDKDLDW
YRERGCELIKVCAEPGDLILWDSRQMHWAQFGTSDLVRTIVYATYTPAAWMSEEDRQKKKELFEAYETTTHWPHT
NLFTHGKAMVKVDGEEVVDPLERDEPLTKPVRSERLLQLAGVKPY*
Coding >Ani_SJS72_1|g8442.t1
ATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACA
CAGCAGCCTCAATATGGTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGC
AAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATTCGGCCTTGGCTTTGATCGCAAC
GACAAGTCCACCTGGAAGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCG
CACGAGAAGTATGTCTGGGACGTCCGGTGCGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGAC
GAGCTCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGATTCTCAGCCC
TGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCG
GGCCCCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAAGAGAACCCG
GTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGG
TACCGCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGACTCCAGACAG
ATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGG
ATGAGTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGGCCGCATACG
AACTTGTTCACACATGGGAAGGCGATGGTGAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAA
CCTCTTACCAAGCCGGTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAG
Transcript >Ani_SJS72_1|g8442.t1
ATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACA
CAGCAGCCTCAATATGGTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGC
AAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATTCGGCCTTGGCTTTGATCGCAAC
GACAAGTCCACCTGGAAGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCG
CACGAGAAGTATGTCTGGGACGTCCGGTGCGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGAC
GAGCTCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGATTCTCAGCCC
TGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCG
GGCCCCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAAGAGAACCCG
GTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGG
TACCGCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGACTCCAGACAG
ATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGG
ATGAGTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGGCCGCATACG
AACTTGTTCACACATGGGAAGGCGATGGTGAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAA
CCTCTTACCAAGCCGGTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAG
Gene >Ani_SJS72_1|g8442.t1
ATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACA
CAGCAGCCTCAATATGGTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGC
AAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATCATTCGGCCTTGGCTTTGATCGCAAC
GACAAGTCCACCTGGAAGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCG
CACGAGAAGTATGTCTGGGACGTCCGGTGGTAAGTCACGTCTCTCTTCCCTCCTCTCTAGAGATCCATCTTGCTA
AACCATGGCTACAGCGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCC
TTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGATTCTCAGCCCTGGCCCCACTGCGAC
CAAGCGCCCGAACGCAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGT
GGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGAAGAGAACCCGGTCACTGGCCCCACG
CCCTGGCGCACCGCCAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGG
TGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGACTCCAGACAGATGCACTGGGCTCAG
TTCGGGACCTCGGATCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGAT
CGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTGGCCGCATACGAACTTGTTCACACAT
GGGAAGGCGATGGTGAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCG
GTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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