© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8439.t1 |
| Gene name | |
| Location | scaffold_078:77517..79092 |
| Strand | + |
| Gene length (bp) | 1575 |
| Transcript length (bp) | 1575 |
| Coding sequence length (bp) | 1575 |
| Protein length (aa) | 525 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01040 | UbiA | UbiA prenyltransferase family | 4.7E-56 | 211 | 461 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 178 | 200 | 22 |
| 2 | 215 | 237 | 22 |
| 3 | 258 | 280 | 22 |
| 4 | 285 | 303 | 18 |
| 5 | 310 | 332 | 22 |
| 6 | 352 | 374 | 22 |
| 7 | 405 | 427 | 22 |
| 8 | 451 | 473 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8439.t1 MSLLRSSLRRIGSPGDPSRICSQCLLHRNRTPRTFPAALRTFTSSFRSHSGIADGHSAQSALNKTYFSANRAEDG TPSKNGIASSLSGGNVSSSATSPLPSDHRVDASTSAPESTQPELPHRRRKRLKEEANAQTADSEHVIPPDASAQL SAFSSAQPTSSLRRKMAAFLALCKPRLSVLIVLSTTSAYGLYPISSLLTLDPSMTPLPTLSTSTLTFLYLTAGTF LSSCSANTINMFLEPKYDALMSRTRNRPLVRGLISRRAAVLFALATALTGVGMLYFGTNPTVAALSASNIILYGF IYTPLKRLHVINTWVGAIVGGIPPLMGWVAAAGQTATTGHDTWRDMLFSQDSIGGWLLGGILFAWQFPHFNALSH TIREEYKRAGYKMLCWKNPAMNARVALRYSILMFPISIGLWWVGVVGHGFLVSSSVANAWLVKEAYHFWKHQGAN GTARGLFWASIWQLPVLLVGGLVTKKGLWDGVWRQIFGQPDELEDEYVYVDEEEEGTASAVAASRSKAAATRVV* |
| Coding | >Ani_SJS72_1|g8439.t1 ATGAGTCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATCCTAGCAGGATATGCTCCCAATGTCTT CTACATCGAAATCGGACCCCTCGAACCTTCCCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTCG GGCATTGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATTTCTCGGCCAATCGCGCCGAAGATGGC ACCCCGAGCAAGAATGGCATTGCCTCCTCGCTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCCA TCAGACCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAACCAGAGCTCCCTCATCGCCGGAGGAAG CGTTTAAAGGAAGAAGCGAATGCCCAAACCGCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCTA TCCGCCTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGGCTGCTTTCCTCGCCCTCTGCAAGCCT CGCCTCTCCGTCCTCATCGTGCTGAGCACCACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCTC GATCCGTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCTTCCTCTACCTGACGGCGGGCACCTTC CTCTCCAGCTGCAGCGCCAACACCATCAATATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCGC AACAGGCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCTTCGCTCTCGCGACTGCCCTCACTGGT GTCGGCATGCTCTACTTCGGCACTAACCCCACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTTC ATCTACACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTGCCATTGTAGGCGGTATTCCCCCGTTG ATGGGCTGGGTCGCTGCTGCCGGCCAAACCGCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCAA GACAGCATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAATTCCCCCACTTCAACGCCTTGTCTCAT ACCATCCGCGAAGAGTACAAGCGCGCCGGCTACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGTC GCGCTGCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGTGGGTCGGAGTCGTCGGTCACGGATTC TTGGTTAGCAGCTCGGTCGCGAATGCTTGGTTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAAC GGAACGGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTCTGCTGGTGGGTGGTCTCGTTACCAAG AAGGGTCTCTGGGATGGTGTATGGCGTCAGATTTTCGGGCAGCCAGATGAGCTAGAGGATGAGTATGTGTATGTT GACGAGGAAGAGGAAGGTACTGCTTCTGCTGTGGCTGCCTCGCGCTCCAAAGCAGCGGCGACTCGCGTCGTATGA |
| Transcript | >Ani_SJS72_1|g8439.t1 ATGAGTCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATCCTAGCAGGATATGCTCCCAATGTCTT CTACATCGAAATCGGACCCCTCGAACCTTCCCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTCG GGCATTGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATTTCTCGGCCAATCGCGCCGAAGATGGC ACCCCGAGCAAGAATGGCATTGCCTCCTCGCTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCCA TCAGACCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAACCAGAGCTCCCTCATCGCCGGAGGAAG CGTTTAAAGGAAGAAGCGAATGCCCAAACCGCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCTA TCCGCCTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGGCTGCTTTCCTCGCCCTCTGCAAGCCT CGCCTCTCCGTCCTCATCGTGCTGAGCACCACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCTC GATCCGTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCTTCCTCTACCTGACGGCGGGCACCTTC CTCTCCAGCTGCAGCGCCAACACCATCAATATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCGC AACAGGCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCTTCGCTCTCGCGACTGCCCTCACTGGT GTCGGCATGCTCTACTTCGGCACTAACCCCACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTTC ATCTACACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTGCCATTGTAGGCGGTATTCCCCCGTTG ATGGGCTGGGTCGCTGCTGCCGGCCAAACCGCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCAA GACAGCATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAATTCCCCCACTTCAACGCCTTGTCTCAT ACCATCCGCGAAGAGTACAAGCGCGCCGGCTACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGTC GCGCTGCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGTGGGTCGGAGTCGTCGGTCACGGATTC TTGGTTAGCAGCTCGGTCGCGAATGCTTGGTTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAAC GGAACGGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTCTGCTGGTGGGTGGTCTCGTTACCAAG AAGGGTCTCTGGGATGGTGTATGGCGTCAGATTTTCGGGCAGCCAGATGAGCTAGAGGATGAGTATGTGTATGTT GACGAGGAAGAGGAAGGTACTGCTTCTGCTGTGGCTGCCTCGCGCTCCAAAGCAGCGGCGACTCGCGTCGTATGA |
| Gene | >Ani_SJS72_1|g8439.t1 ATGAGTCTCCTTCGCTCCTCGCTGCGGAGGATAGGGTCGCCAGGCGATCCTAGCAGGATATGCTCCCAATGTCTT CTACATCGAAATCGGACCCCTCGAACCTTCCCCGCCGCTCTCCGCACCTTCACCTCGTCCTTTCGATCCCACTCG GGCATTGCAGACGGCCATTCCGCTCAGTCGGCTCTAAATAAGACTTATTTCTCGGCCAATCGCGCCGAAGATGGC ACCCCGAGCAAGAATGGCATTGCCTCCTCGCTCTCCGGCGGCAATGTCTCCTCCAGCGCGACATCTCCTCTCCCA TCAGACCACCGCGTCGATGCCTCCACGTCTGCCCCCGAATCCACACAACCAGAGCTCCCTCATCGCCGGAGGAAG CGTTTAAAGGAAGAAGCGAATGCCCAAACCGCCGATTCTGAACATGTCATTCCCCCCGATGCCTCCGCACAGCTA TCCGCCTTCTCTTCCGCCCAGCCCACCTCTTCCCTCCGCCGTAAGATGGCTGCTTTCCTCGCCCTCTGCAAGCCT CGCCTCTCCGTCCTCATCGTGCTGAGCACCACCTCCGCCTATGGCCTGTATCCGATCTCGTCCCTCCTTACGCTC GATCCGTCCATGACTCCGTTACCAACCCTCTCCACCTCAACCCTAACCTTCCTCTACCTGACGGCGGGCACCTTC CTCTCCAGCTGCAGCGCCAACACCATCAATATGTTTCTGGAGCCGAAATACGATGCTCTCATGTCGCGCACCCGC AACAGGCCTCTCGTCCGTGGCCTTATCTCCCGCCGTGCCGCCGTACTCTTCGCTCTCGCGACTGCCCTCACTGGT GTCGGCATGCTCTACTTCGGCACTAACCCCACTGTCGCGGCCCTCTCAGCAAGCAACATCATCCTATACGGCTTC ATCTACACCCCGCTCAAGCGCCTTCATGTCATCAACACCTGGGTCGGTGCCATTGTAGGCGGTATTCCCCCGTTG ATGGGCTGGGTCGCTGCTGCCGGCCAAACCGCTACCACGGGCCACGATACCTGGCGGGACATGCTCTTCAGCCAA GACAGCATCGGTGGTTGGCTGCTTGGCGGTATTCTGTTTGCATGGCAATTCCCCCACTTCAACGCCTTGTCTCAT ACCATCCGCGAAGAGTACAAGCGCGCCGGCTACAAGATGCTCTGCTGGAAGAACCCTGCTATGAACGCCCGCGTC GCGCTGCGCTATTCCATCCTCATGTTCCCCATCTCCATTGGACTCTGGTGGGTCGGAGTCGTCGGTCACGGATTC TTGGTTAGCAGCTCGGTCGCGAATGCTTGGTTGGTGAAGGAGGCGTACCATTTCTGGAAGCACCAGGGCGCCAAC GGAACGGCGAGAGGTCTCTTCTGGGCTAGTATCTGGCAGCTTCCGGTTCTGCTGGTGGGTGGTCTCGTTACCAAG AAGGGTCTCTGGGATGGTGTATGGCGTCAGATTTTCGGGCAGCCAGATGAGCTAGAGGATGAGTATGTGTATGTT GACGAGGAAGAGGAAGGTACTGCTTCTGCTGTGGCTGCCTCGCGCTCCAAAGCAGCGGCGACTCGCGTCGTATGA |