© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8398.t1 |
| Gene name | |
| Location | scaffold_077:91881..92535 |
| Strand | + |
| Gene length (bp) | 654 |
| Transcript length (bp) | 573 |
| Coding sequence length (bp) | 573 |
| Protein length (aa) | 191 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01786 | AOX | Alternative oxidase | 1.4E-69 | 1 | 150 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009916 | alternative oxidase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | No |
| GO:0003674 | molecular_function | No |
| GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8398.t1 MVGGMLRHLKSIRRMKRDHGWIESLIDEAYNERMHLLTFLDLADPGIVMRLVVLAAQGVFFNAFFVFYLVSPKTC HRFVGYLEEEAVITYTHAIRQLQAGKLPAWDNLSAPEIAIKYWRMPEGKQRMVDLLLYVRADEAKHREVNHTLGN LDQHEDPNPYTALYHDGNNAVPSASPDAGKPIGWERDELI* |
| Coding | >Ani_SJS72_1|g8398.t1 ATGGTGGGCGGCATGCTCCGACATCTGAAGAGTATCAGACGGATGAAGAGGGATCATGGATGGATCGAGTCCTTG ATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGACATTCCTCGACCTGGCAGATCCAGGTATCGTCATGCGC TTAGTTGTCTTGGCCGCGCAGGGCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAAGACATGT CACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCATTACCTATACACACGCAATCCGTCAACTTCAAGCTGGA AAACTGCCAGCATGGGACAATTTATCAGCGCCGGAGATTGCAATCAAATATTGGAGAATGCCAGAGGGAAAACAG AGAATGGTTGATTTGTTGCTTTATGTTCGGGCGGATGAAGCGAAGCATCGCGAGGTTAACCATACTTTGGGAAAC TTAGACCAGCATGAAGATCCCAATCCTTATACTGCGCTTTATCACGATGGGAATAATGCTGTTCCCTCAGCGTCG CCCGATGCAGGGAAGCCCATTGGGTGGGAGCGAGATGAACTAATTTAG |
| Transcript | >Ani_SJS72_1|g8398.t1 ATGGTGGGCGGCATGCTCCGACATCTGAAGAGTATCAGACGGATGAAGAGGGATCATGGATGGATCGAGTCCTTG ATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGACATTCCTCGACCTGGCAGATCCAGGTATCGTCATGCGC TTAGTTGTCTTGGCCGCGCAGGGCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAAGACATGT CACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCATTACCTATACACACGCAATCCGTCAACTTCAAGCTGGA AAACTGCCAGCATGGGACAATTTATCAGCGCCGGAGATTGCAATCAAATATTGGAGAATGCCAGAGGGAAAACAG AGAATGGTTGATTTGTTGCTTTATGTTCGGGCGGATGAAGCGAAGCATCGCGAGGTTAACCATACTTTGGGAAAC TTAGACCAGCATGAAGATCCCAATCCTTATACTGCGCTTTATCACGATGGGAATAATGCTGTTCCCTCAGCGTCG CCCGATGCAGGGAAGCCCATTGGGTGGGAGCGAGATGAACTAATTTAG |
| Gene | >Ani_SJS72_1|g8398.t1 ATGGTGGGCGGCATGCTCCGACATCTGAAGAGTATCAGACGGATGAAGAGGGATCATGGATGGTCAGTACAAGGG AAAAAAATAATTATCTCCAAGTACTTAGCAGTAGCTACACAAGAAGCTGCAGACTGACACAACCGCAGGATCGAG TCCTTGATTGACGAAGCCTACAACGAGCGCATGCACCTCTTGACATTCCTCGACCTGGCAGATCCAGGTATCGTC ATGCGCTTAGTTGTCTTGGCCGCGCAGGGCGTCTTCTTCAATGCCTTCTTCGTCTTCTACCTTGTTTCGCCCAAG ACATGTCACCGATTTGTTGGATACCTGGAGGAAGAAGCTGTCATTACCTATACACACGCAATCCGTCAACTTCAA GCTGGAAAACTGCCAGCATGGGACAATTTATCAGCGCCGGAGATTGCAATCAAATATTGGAGAATGCCAGAGGGA AAACAGAGAATGGTTGATTTGTTGCTTTATGTTCGGGCGGATGAAGCGAAGCATCGCGAGGTTAACCATACTTTG GGAAACTTAGACCAGCATGAAGATCCCAATCCTTATACTGCGCTTTATCACGATGGGAATAATGCTGTTCCCTCA GCGTCGCCCGATGCAGGGAAGCCCATTGGGTGGGAGCGAGATGAACTAATTTAG |