Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g8316.t1
Gene name
Locationscaffold_076:35227..35796
Strand+
Gene length (bp)569
Transcript length (bp)387
Coding sequence length (bp)387
Protein length (aa) 129

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01042 Ribonuc_L-PSP Endoribonuclease L-PSP 3.8E-37 18 127

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g8316.t1
MATKTPISTDKAPKALPGIYSQAIVSNGVVYCSGAVAMDAETGKIIDGDIKAHTHQCIKNLGNVLEAAGSDLTKV
LKVNVFLSNMDDFADMNSVYMQYWGDVKPCRTCVAVKTLPLNTDVEIECIAHQ*
Coding >Ani_SJS72_1|g8316.t1
ATGGCCACCAAAACCCCCATCTCAACTGACAAGGCCCCCAAGGCCCTTCCCGGAATCTATTCCCAAGCCATTGTC
TCCAACGGGGTTGTCTACTGCTCTGGCGCGGTGGCTATGGACGCAGAGACAGGCAAGATCATTGATGGCGATATC
AAAGCGCACACACACCAATGCATCAAAAACCTCGGAAACGTTCTCGAAGCCGCCGGTAGCGATCTCACCAAGGTC
CTCAAGGTGAACGTATTCTTGTCAAATATGGATGACTTTGCCGACATGAATTCTGTCTATATGCAATACTGGGGG
GATGTTAAGCCTTGTCGAACATGCGTGGCGGTTAAGACTTTGCCCCTGAATACAGACGTCGAGATCGAGTGCATT
GCTCATCAGTAG
Transcript >Ani_SJS72_1|g8316.t1
ATGGCCACCAAAACCCCCATCTCAACTGACAAGGCCCCCAAGGCCCTTCCCGGAATCTATTCCCAAGCCATTGTC
TCCAACGGGGTTGTCTACTGCTCTGGCGCGGTGGCTATGGACGCAGAGACAGGCAAGATCATTGATGGCGATATC
AAAGCGCACACACACCAATGCATCAAAAACCTCGGAAACGTTCTCGAAGCCGCCGGTAGCGATCTCACCAAGGTC
CTCAAGGTGAACGTATTCTTGTCAAATATGGATGACTTTGCCGACATGAATTCTGTCTATATGCAATACTGGGGG
GATGTTAAGCCTTGTCGAACATGCGTGGCGGTTAAGACTTTGCCCCTGAATACAGACGTCGAGATCGAGTGCATT
GCTCATCAGTAG
Gene >Ani_SJS72_1|g8316.t1
ATGGCCACCAAAACCCCCATCTCAACTGACAAGGCCCCCAAGGCCCTTCCCGGAATCTATTCCCAAGCCATTGTC
TCCAACGGGGTTGTCTACTGCTCTGGCGCGGTGGCTATGGACGCAGAGACAGGCAAGATCATTGATGGCGATATC
AAAGCGCACACAGTACGCATTTATCTTCCCTCATTCCCCTCACCGATAATTCTACAACATCCCCTAATGACTCGC
TGATAACATAGCACCAATGCATCAAAAACCTCGGAAACGTTCTCGAAGCCGCCGGTAGCGATCTCACCAAGGTCC
TCAAGGTGAACGTATTCTTGTCAAATATGGATGACTTTGCCGACATGAATTCTGTCTATATGCAATACTGGGGGG
ATGTTAAGCCTTGTCGAACGTGAGTAATTTTCCCTTTCCCTGTTTCTGTGTGAATTCCACGAATGTGGGGGAGGG
TTAAACGCTGTGATGTAGAATTATGGCTGACTGATACTGATTGGATGGGTAGATGCGTGGCGGTTAAGACTTTGC
CCCTGAATACAGACGTCGAGATCGAGTGCATTGCTCATCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail