© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8280.t1 |
| Gene name | |
| Location | scaffold_075:68429..69928 |
| Strand | + |
| Gene length (bp) | 1499 |
| Transcript length (bp) | 1350 |
| Coding sequence length (bp) | 1350 |
| Protein length (aa) | 450 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04088 | Peroxin-13_N | Peroxin 13, N-terminal region | 3.4E-53 | 152 | 292 |
| PF07653 | SH3_2 | Variant SH3 domain | 1.4E-08 | 328 | 388 |
| PF00018 | SH3_1 | SH3 domain | 3.2E-08 | 330 | 384 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0016560 | protein import into peroxisome matrix, docking | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0005777 | peroxisome | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0051179 | localization | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0033036 | macromolecule localization | No |
| GO:0042579 | microbody | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005488 | binding | No |
| GO:0008104 | protein localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051641 | cellular localization | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0043229 | intracellular organelle | No |
| GO:0043226 | organelle | No |
| GO:0005575 | cellular_component | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 116 | 138 | 22 |
| 2 | 274 | 296 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8280.t1 MASVSPPKPWERAGAAAGSPALATSSAATPTASSAMTASSTTPTAAASASAPTATASSTSTAPDLPSRPNSLNSV VNRTASNYSPYSASRFGASPYGGYGSYSSPYSRFGTMGSMYGGYGGMGGYGGMYGGMGGMGGMYGGMPGDPNDPN SLTNSFSQSTQATFQMIESIVGAFGGFAQMLESTYMATHSSFFAMVSVAEQFGNLRNTLGSALGIFTIIRWFKTL IAKITGRPPPADATALTPSAFAAFLSGRSSPATLPDGTPAPPKPSKKPFFMFLIAVFGLPYLMGKLIKALARSQE ERRQLMLGPNGEPVQGQGAPLDPSKLDFCRVLYDYTPEAQESSGIDLAVKKGDIVAVLSKSDPMGNASEWWRCRA RDGRVGYLPGPYLETIQRRPQQQAITSGSEAGSRSNSMQASASEEIATEAKKPQLKGKMGDISPESFQKSAFYS* |
| Coding | >Ani_SJS72_1|g8280.t1 ATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTGGGTCTCCTGCTTTGGCAACATCA TCGGCGGCTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACCGCGGCCGCCAGTGCCTCG GCCCCCACAGCTACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTT GTCAATCGCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGCCCTTACGGCGGCTACGGA AGCTACTCGTCGCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATAT GGCGGCATGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGTGATCCCAACGATCCCAAC AGCCTGACGAATTCCTTCAGCCAGAGCACCCAAGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGA GGATTCGCTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGCCATGGTCTCTGTGGCAGAG CAGTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTG ATCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCCTC AGCGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTC ATGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAGAG GAACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAG CTTGACTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGAAG AAGGGCGACATCGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCT CGTGATGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGATC ACCTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCC AAGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCATGA |
| Transcript | >Ani_SJS72_1|g8280.t1 ATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTGGGTCTCCTGCTTTGGCAACATCA TCGGCGGCTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACCGCGGCCGCCAGTGCCTCG GCCCCCACAGCTACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTT GTCAATCGCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGCCCTTACGGCGGCTACGGA AGCTACTCGTCGCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATAT GGCGGCATGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGTGATCCCAACGATCCCAAC AGCCTGACGAATTCCTTCAGCCAGAGCACCCAAGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGA GGATTCGCTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGCCATGGTCTCTGTGGCAGAG CAGTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTG ATCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCCTC AGCGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTC ATGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAGAG GAACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAG CTTGACTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGAAG AAGGGCGACATCGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCT CGTGATGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGATC ACCTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCC AAGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCATGA |
| Gene | >Ani_SJS72_1|g8280.t1 ATGGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTGGTATGTCCACAGCTCTCTTGGAA AATGATGAATTAGTAAAACAATATATATCTTCATATTACGGTGTGACTGACACATCACTCACTTAAAGGGTCTCC TGCTTTGGCAACATCATCGGCGGCTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACCGC GGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATCTACTGCTCCCGATCTCCCGTCCCGTCCTAA TTCACTGAATTCTGTTGTCAATCGCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGCCC TTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGGCACGATGGGCTCCATGTACGGAGGCTATGG CGGCATGGGAGGATATGGCGGCATGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGTGA TCCCAACGATCCCAACAGCCTGACGAATTCCTTCAGCCAGAGCACCCAAGCTACGTTCCAGATGATTGAGAGTAT CGTGGGTGCGTTTGGAGGATTCGCTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGGTAC GTTAACATCTTTTCCTCGGCGCGTTGTTGCCTGTTCACTAATAGTTGTCCCTAGCCATGGTCTCTGTGGCAGAGC AGTTCGGCAACCTCCGAAACACGCTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTGA TCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGTCTGCCTTTGCAGCATTCCTCA GCGGCCGCTCCTCCCCCGCCACCCTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTCA TGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGGCTCTGGCTCGGTCGCAAGAGG AACGTCGCCAGCTGATGCTGGGTCCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAGC TTGACTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCGGCATCGATCTGGCCGTGAAGA AGGGCGACATCGTCGCTGTCCTCAGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCTC GTGATGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCCGCCCACAACAGCAAGCGATCA CCTCGGGCAGCGAAGCCGGCAGTCGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCCA AGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCCTGAAAGCTTCCAGAAGAGCGCGTTCTACTCATGA |