© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8262.t1 |
| Gene name | |
| Location | scaffold_075:2356..4698 |
| Strand | - |
| Gene length (bp) | 2342 |
| Transcript length (bp) | 1602 |
| Coding sequence length (bp) | 1602 |
| Protein length (aa) | 534 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.3E-60 | 46 | 492 |
| PF00324 | AA_permease | Amino acid permease | 1.2E-26 | 63 | 507 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 49 | 71 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 124 | 146 | 22 |
| 4 | 166 | 188 | 22 |
| 5 | 201 | 220 | 19 |
| 6 | 245 | 267 | 22 |
| 7 | 280 | 302 | 22 |
| 8 | 332 | 354 | 22 |
| 9 | 381 | 403 | 22 |
| 10 | 413 | 435 | 22 |
| 11 | 444 | 466 | 22 |
| 12 | 481 | 503 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8262.t1 MDNSVKSVAPVAHSLDDKGSGSIRVQNADELRLAQMGHKQELKRHFSVWSLIGLAANCTISWTGLGLGLITSINA GGPGALIYGFILVFILQCFLGTSLAEFVSAYPVEGGMYHWIAAIAPKRYSNVLSFATGWSTVFGWIFTTASTNLV YSSNFVALIALYRPNLVVQPWMTFVAYQGFNVITSGIVMFGNKWMPVINKFSLCYLQLAWFVILVTVAATAPKHN DAEFVFRTWINETGWKNNVICFITGLVNPLYCLGGLDGITHITEEMPNPGRNAPLALACTLAIAFVTGFTYLLSL MFSVQDYASLADSPTGLPLAELFHQATQSRGGAFALVFLLWVAVGPCMIGSQLSTGRMLWAFARDDGLPFSKFCS KVNKRFGAPVNAQLCVGIIIALLGCIYLGSSTAFNSMMSSSVTINNIAYLVPILTNVLLGRKTMHRGPFSLGYVA GMTVNIITVAWLVFAIVFFSFPYDMPVTASNMNYTCVCVGGFLLLELLWWIVAGKKYSRRMQKVREEEKNASQAV VVDHLGKS* |
| Coding | >Ani_SJS72_1|g8262.t1 ATGGACAATTCCGTAAAATCTGTGGCCCCTGTTGCCCACTCCCTTGATGATAAAGGGTCAGGCAGTATTCGGGTC CAGAATGCAGATGAATTGCGCCTGGCGCAGATGGGCCATAAGCAAGAGCTGAAACGCCACTTCTCAGTATGGAGT CTCATCGGGCTGGCTGCAAATTGTACCATCTCCTGGACTGGGCTTGGTCTGGGTCTCATCACTTCCATCAACGCT GGCGGTCCCGGTGCCCTTATCTACGGATTTATCCTCGTCTTTATCCTGCAATGCTTTCTAGGAACATCGCTAGCG GAGTTTGTTTCTGCGTACCCAGTCGAAGGTGGGATGTATCACTGGATTGCAGCCATTGCCCCGAAACGTTACAGC AATGTGTTAAGCTTTGCGACTGGTTGGAGCACAGTGTTCGGCTGGATATTTACCACCGCCTCTACGAACCTCGTT TATTCGTCGAACTTCGTCGCCCTTATTGCCTTATACAGACCTAATCTTGTTGTGCAGCCTTGGATGACTTTCGTT GCGTACCAAGGGTTCAACGTTATAACATCTGGAATTGTCATGTTTGGCAATAAGTGGATGCCAGTAATCAACAAG TTCTCATTATGCTACCTCCAACTGGCCTGGTTCGTCATCCTGGTCACCGTCGCAGCCACTGCCCCCAAGCATAAC GATGCAGAATTCGTCTTTCGTACTTGGATTAATGAAACTGGTTGGAAGAACAACGTCATCTGTTTCATAACGGGC CTAGTCAACCCTCTCTACTGCCTAGGCGGCTTAGATGGGATCACTCACATCACCGAGGAAATGCCAAACCCAGGA AGAAATGCTCCGTTAGCCCTAGCTTGCACACTCGCCATAGCTTTCGTAACCGGCTTCACCTACCTCCTCAGTCTC ATGTTCTCCGTCCAAGACTACGCAAGCCTCGCCGACTCCCCGACAGGCCTCCCCCTCGCAGAGCTTTTTCACCAG GCAACCCAAAGCCGCGGAGGCGCCTTTGCCCTCGTCTTCCTTCTCTGGGTTGCAGTCGGACCATGCATGATCGGC TCACAGCTGAGCACCGGACGAATGCTCTGGGCATTTGCCAGAGACGACGGACTTCCCTTCTCCAAATTCTGTTCC AAAGTCAACAAGCGATTCGGAGCTCCCGTCAACGCCCAGCTCTGCGTGGGTATCATCATCGCACTTCTAGGCTGT ATCTACCTTGGTTCCAGCACCGCGTTTAACTCGATGATGAGTTCTTCTGTAACAATCAACAACATCGCCTACCTC GTTCCCATCCTCACAAATGTCCTCCTTGGCCGGAAAACCATGCACCGTGGTCCGTTCTCACTAGGATATGTAGCA GGAATGACGGTAAATATTATCACTGTTGCGTGGCTGGTCTTCGCAATTGTGTTTTTCTCGTTTCCGTATGATATG CCTGTTACTGCCTCAAATATGAATTATACGTGTGTATGTGTTGGTGGATTCTTGCTGCTGGAGCTACTGTGGTGG ATTGTGGCGGGGAAGAAGTATTCGCGACGAATGCAGAAGGTAAGGGAAGAAGAGAAAAATGCTTCACAGGCGGTG GTGGTGGATCATCTGGGAAAGAGCTGA |
| Transcript | >Ani_SJS72_1|g8262.t1 ATGGACAATTCCGTAAAATCTGTGGCCCCTGTTGCCCACTCCCTTGATGATAAAGGGTCAGGCAGTATTCGGGTC CAGAATGCAGATGAATTGCGCCTGGCGCAGATGGGCCATAAGCAAGAGCTGAAACGCCACTTCTCAGTATGGAGT CTCATCGGGCTGGCTGCAAATTGTACCATCTCCTGGACTGGGCTTGGTCTGGGTCTCATCACTTCCATCAACGCT GGCGGTCCCGGTGCCCTTATCTACGGATTTATCCTCGTCTTTATCCTGCAATGCTTTCTAGGAACATCGCTAGCG GAGTTTGTTTCTGCGTACCCAGTCGAAGGTGGGATGTATCACTGGATTGCAGCCATTGCCCCGAAACGTTACAGC AATGTGTTAAGCTTTGCGACTGGTTGGAGCACAGTGTTCGGCTGGATATTTACCACCGCCTCTACGAACCTCGTT TATTCGTCGAACTTCGTCGCCCTTATTGCCTTATACAGACCTAATCTTGTTGTGCAGCCTTGGATGACTTTCGTT GCGTACCAAGGGTTCAACGTTATAACATCTGGAATTGTCATGTTTGGCAATAAGTGGATGCCAGTAATCAACAAG TTCTCATTATGCTACCTCCAACTGGCCTGGTTCGTCATCCTGGTCACCGTCGCAGCCACTGCCCCCAAGCATAAC GATGCAGAATTCGTCTTTCGTACTTGGATTAATGAAACTGGTTGGAAGAACAACGTCATCTGTTTCATAACGGGC CTAGTCAACCCTCTCTACTGCCTAGGCGGCTTAGATGGGATCACTCACATCACCGAGGAAATGCCAAACCCAGGA AGAAATGCTCCGTTAGCCCTAGCTTGCACACTCGCCATAGCTTTCGTAACCGGCTTCACCTACCTCCTCAGTCTC ATGTTCTCCGTCCAAGACTACGCAAGCCTCGCCGACTCCCCGACAGGCCTCCCCCTCGCAGAGCTTTTTCACCAG GCAACCCAAAGCCGCGGAGGCGCCTTTGCCCTCGTCTTCCTTCTCTGGGTTGCAGTCGGACCATGCATGATCGGC TCACAGCTGAGCACCGGACGAATGCTCTGGGCATTTGCCAGAGACGACGGACTTCCCTTCTCCAAATTCTGTTCC AAAGTCAACAAGCGATTCGGAGCTCCCGTCAACGCCCAGCTCTGCGTGGGTATCATCATCGCACTTCTAGGCTGT ATCTACCTTGGTTCCAGCACCGCGTTTAACTCGATGATGAGTTCTTCTGTAACAATCAACAACATCGCCTACCTC GTTCCCATCCTCACAAATGTCCTCCTTGGCCGGAAAACCATGCACCGTGGTCCGTTCTCACTAGGATATGTAGCA GGAATGACGGTAAATATTATCACTGTTGCGTGGCTGGTCTTCGCAATTGTGTTTTTCTCGTTTCCGTATGATATG CCTGTTACTGCCTCAAATATGAATTATACGTGTGTATGTGTTGGTGGATTCTTGCTGCTGGAGCTACTGTGGTGG ATTGTGGCGGGGAAGAAGTATTCGCGACGAATGCAGAAGGTAAGGGAAGAAGAGAAAAATGCTTCACAGGCGGTG GTGGTGGATCATCTGGGAAAGAGCTGA |
| Gene | >Ani_SJS72_1|g8262.t1 ATGGACAATTCCGTAAAATCTGTGGCCCCTGTTGCCCACTCCCTTGATGATAAAGGGTCAGGCAGTATTCGGGTC CAGAATGCAGATGAATTGCGCCTGGCGCAGATGGGTAAGTTCGATGTCACCAAAGCCTCTACCTTCTGCAGTTCT AACAATGTTTTTTACTTGCGATCAAACAGGCCATAAGCAAGAGCTGAAACGCCACTTCTCAGTATGGAGTCTCAT CGGGCTGGCTGCAAATTGTACCATCTCCTGGACTGGTGAGTTGTGAACCACTACAGACTTGACAAGCCTCATGCG ACGCCTCAAGGAACCTGACATGAATGCAAACAGGGCTTGGTCTGGGTCTCATCACTTCCATCAACGCTGGCGGTC CCGGTGCCCGTACGGAGCCCCGTAACTCTAGAACAATGCCATGAGATTGACACTCCCAGTTATCTACGGATTTAT CCTCGTCTTTATCCTGCAATGCTTTCTAGGAACATCGCTAGCGGAGTTTGTTTCTGCGTACCCAGTCGAAGGTGG GATGTATCACTGGATTGCAGCCATTGCCCCGAAACGTTACAGCAATGTGTTAAGCTTTGCGACTGGTTGGAGCAC AGTGTTCGGCTGTATGAACCTTGACAATATCTGCCAAGTAGTTTGATGCTGATGTGGACAGGGATATTTACCACC GCCTCTACGAACCTCGTTTATTCGTCGAACTTCGTCGCCCTTATTGCCTTATACAGACCTAATCTTGTTGTGCAG CCTTGGATGACTTTCGTTGCGTACCAAGGGTTCAACGTTATAACATCTGGAATTGTCATGTTTGGCAATAAGTGG ATGCCAGTAATCAACAAGTTCTCATGTTGGTATATGATTCTTGGTTTCTGTGGTTCACCTGCTAATATGGTTGAT GGGATAGTATGCTACCTCCAACTGGCCTGGTTCGTCATCCTGGTCACCGTCGCAGCCACTGCCCCCAAGCATAAC GATGCAGAATTCGTCTTTCGTACTTGGATTAATGAAACTGGTTGGAAGAACAACGTCATCTGTTTCATAACGGGC CTAGTCAACCCTCTCTACTGCCTAGGCGGCTTAGATGGGATCACTGTACGTATTCCAGCTTGCATTGCACGGAAG TGGCTACTAATCAGAACCACAGCACATCACCGAGGAAATGCCAAACGTGAGTAGCACACTTTAGCGCCTGATCGG GAGCTAAACTATACATCGCAACAGCCAGGAAGAAATGCTCCGTTAGCCCTAGGTAGGCTAAGTAACCCTGTTCCT CTAAAACTATACTAACGCAACTGTCTTCTTAGCTTGCACACTCGCCATAGCTTTCGTAACCGGCTTCACCTACCT CCTCAGTCTCATGTTCTCCGTCCAAGACTACGCAAGCCTCGCCGACTCCCCGACAGGCCTCCCCCTCGCAGAGCT TTTTCACCAGGCAACCCAAAGCCGCGGAGGCGCCTTTGCCCTCGTCTTCCTTCTCTGGGTTGCAGTCGGACCATG CATGATCGGCTCACAGCTGAGTATGACTGGACTACCCCTTCTAAGCTACGAATCGATCATTCAGATTAACGACAG GACTCCAATAGGCACCGGACGAATGCTCTGGGCATTTGCCAGAGACGACGGACTTCCCTTCTCCAAATTGTGCGC TTCCAAATCAAACCATGTAACCCGAATAACAGACACTAACCGCATCCAAAGCTGTTCCAAAGTCAACAAGCGATT CGGAGCTCCCGTCAACGCCCAGCTCTGCGTGGGTATCATCATCGCACTTCTAGGCTGTATCTACCTTGGTTCCAG CACCGCGTTTAACTCGATGATGAGTTCTTCTGTGTACGCACTGCCCCACTTCCTACAAACCCCTAAAACATCAAG AGAGAGTTTCCCTACCTTTCTGACTTTTTCTCCACACGCAGAACAATCAACAACATCGCCTACCTCGTTCCCATC CTCACAAATGTCCTCCTTGGCCGGAAAACCATGCACCGTGGTCCGTTCTCACTAGGATATGTAGCAGGAATGACG GTAAATATTATCACTGTTGCGTGGCTGGTCTTCGCAATTGTGTTTTTCTCGTTTCCGTATGATATGCCTGTTACT GGTGAGTTATATGTTACACTTTCTCTTTATCGGCGTTCAACTTCGTTCGTATTCATTCTAATATTTATATAACAG CCTCAAATATGAATTATACGTGTGTATGTGTTGGTGGATTCTTGCTGCTGGAGCTACTGTGGTGGATTGTGGCGG GGAAGAAGTATTCGCGACGAATGCAGAAGGTAAGGGAAGAAGAGAAAAATGCTTCACAGGCGGTGGTGGTGGATC ATCTGGGAAAGAGCTGA |