© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8257.t1 |
| Gene name | |
| Location | scaffold_074:139727..141698 |
| Strand | + |
| Gene length (bp) | 1971 |
| Transcript length (bp) | 1740 |
| Coding sequence length (bp) | 1740 |
| Protein length (aa) | 580 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01532 | Glyco_hydro_47 | Glycosyl hydrolase family 47 | 3.1E-184 | 103 | 573 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005509 | calcium ion binding | Yes |
| GO:0016020 | membrane | Yes |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0046872 | metal ion binding | No |
| GO:0015923 | mannosidase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0005488 | binding | No |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0015924 | mannosyl-oligosaccharide mannosidase activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003824 | catalytic activity | No |
| GO:0004559 | alpha-mannosidase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 31 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8257.t1 MARRSYLLPTIILLCITYALFSSLPPGAEPHYHHHFRNPYDPPPHKEGRIRWRKHAEQYPISDYIPLPSTEPSTI PRIQHKFPRESWFARWGRVKRQRAVKKAFQHAWKGYRNNAWLEDELSPISGGHRETFAGWAATLVDSLDTLVIMG LTEEFEEAVKALEYIDFTTTSAIQINVFETNIRYLGGLLGAYDLTQGKYPILLKKAVEIADMIYGSFDTRNRMPQ SRWEWTRSADGLSIEPGRNTILAELGSLNLEFTRLSQLTKDPKYFDAIQRIADFLEDTQETTDVPGMWPMMVNAK DLEFADPRFTIGGMADSTYEYLPKEHMLLGGQTNQYRRMYNSFMKAMKSRLLFRPMTEDGRDILFAGNLRVTGSS TRSNLEPQWEHLKCYLGGTVGIGSKVFDRPEDLAVARKLVDGCIWAYDIMPTGIMPEILHLTVCKDDENCQLPQS SHPTSTSKDGKKLPPGVVDIPDPKYLLRPEAIESVFIMYRITGDRSLQDAAWRMFQNIDKMTRTSFGHAAISDVR DPESPQMDYMESFWLAETLKYFYLIFSEPDLVNLDEYVLNTEAHPFKRPTASST* |
| Coding | >Ani_SJS72_1|g8257.t1 ATGGCGCGACGGAGCTACCTCCTACCCACTATCATTCTCCTATGCATCACATACGCTCTTTTCTCGAGTCTACCG CCCGGTGCGGAACCACACTACCACCACCATTTCAGAAATCCATACGACCCCCCTCCACATAAAGAGGGTAGGATT CGTTGGCGGAAACATGCCGAGCAGTATCCAATCTCCGATTACATCCCCCTTCCTTCGACTGAGCCATCCACTATT CCCCGAATTCAGCACAAATTTCCTAGGGAGTCGTGGTTCGCACGATGGGGACGGGTAAAAAGGCAGCGTGCGGTC AAGAAGGCATTCCAGCACGCGTGGAAAGGATACAGGAACAATGCCTGGCTGGAAGACGAGCTCTCTCCCATCAGT GGCGGTCACCGCGAGACCTTTGCAGGCTGGGCAGCTACCTTGGTGGATTCCCTAGATACTCTTGTTATTATGGGA CTCACTGAGGAATTTGAGGAGGCTGTGAAAGCGCTGGAGTACATCGACTTCACTACCACCAGCGCCATTCAAATT AATGTCTTCGAGACCAATATCCGGTACTTGGGCGGGCTTCTTGGTGCCTACGACTTGACCCAGGGAAAATATCCG ATTCTCCTGAAGAAGGCAGTTGAGATTGCGGACATGATTTATGGTTCTTTTGACACTCGTAATCGGATGCCGCAA TCTCGGTGGGAATGGACCAGATCTGCGGATGGTCTGAGCATCGAGCCGGGCCGAAACACCATACTTGCTGAACTC GGATCATTGAACCTAGAATTCACGCGTCTATCTCAACTTACAAAGGACCCCAAATACTTTGATGCTATCCAGAGG ATAGCGGATTTTCTCGAGGATACTCAGGAGACAACCGACGTACCTGGGATGTGGCCCATGATGGTCAATGCTAAG GACTTGGAATTCGCTGATCCCAGGTTCACCATCGGTGGAATGGCTGACTCGACATATGAGTACCTCCCGAAAGAG CACATGCTGCTGGGAGGGCAGACGAACCAGTACCGTAGAATGTACAACTCCTTCATGAAGGCGATGAAGAGCCGC CTGCTTTTCCGCCCGATGACCGAAGACGGCCGAGATATTCTCTTTGCTGGGAACCTCCGCGTTACTGGGTCTTCT ACCCGGAGTAACCTGGAGCCCCAGTGGGAACATCTTAAGTGCTACCTTGGAGGTACTGTCGGCATAGGATCCAAG GTGTTTGACCGACCCGAAGATTTGGCTGTCGCGCGGAAGTTGGTCGATGGGTGCATTTGGGCATATGATATTATG CCGACCGGGATCATGCCAGAGATCTTGCATCTTACCGTGTGTAAGGACGATGAGAATTGCCAGTTACCTCAAAGC TCTCATCCCACAAGCACCTCAAAGGATGGCAAGAAACTGCCGCCAGGCGTAGTTGATATTCCCGACCCCAAGTAT CTACTACGACCCGAAGCTATTGAGTCGGTTTTCATAATGTACCGTATAACGGGGGACCGGTCTCTGCAGGATGCT GCGTGGAGGATGTTTCAAAATATCGACAAGATGACGCGGACCTCATTTGGACACGCAGCCATTTCCGATGTCCGG GACCCCGAGTCGCCGCAAATGGACTACATGGAAAGTTTCTGGCTGGCAGAGACTCTAAAGTACTTTTATCTCATA TTTTCCGAGCCGGACCTCGTGAATCTGGACGAATATGTGCTGAACACGGAAGCGCATCCCTTCAAGCGTCCAACT GCTTCAAGTACATAA |
| Transcript | >Ani_SJS72_1|g8257.t1 ATGGCGCGACGGAGCTACCTCCTACCCACTATCATTCTCCTATGCATCACATACGCTCTTTTCTCGAGTCTACCG CCCGGTGCGGAACCACACTACCACCACCATTTCAGAAATCCATACGACCCCCCTCCACATAAAGAGGGTAGGATT CGTTGGCGGAAACATGCCGAGCAGTATCCAATCTCCGATTACATCCCCCTTCCTTCGACTGAGCCATCCACTATT CCCCGAATTCAGCACAAATTTCCTAGGGAGTCGTGGTTCGCACGATGGGGACGGGTAAAAAGGCAGCGTGCGGTC AAGAAGGCATTCCAGCACGCGTGGAAAGGATACAGGAACAATGCCTGGCTGGAAGACGAGCTCTCTCCCATCAGT GGCGGTCACCGCGAGACCTTTGCAGGCTGGGCAGCTACCTTGGTGGATTCCCTAGATACTCTTGTTATTATGGGA CTCACTGAGGAATTTGAGGAGGCTGTGAAAGCGCTGGAGTACATCGACTTCACTACCACCAGCGCCATTCAAATT AATGTCTTCGAGACCAATATCCGGTACTTGGGCGGGCTTCTTGGTGCCTACGACTTGACCCAGGGAAAATATCCG ATTCTCCTGAAGAAGGCAGTTGAGATTGCGGACATGATTTATGGTTCTTTTGACACTCGTAATCGGATGCCGCAA TCTCGGTGGGAATGGACCAGATCTGCGGATGGTCTGAGCATCGAGCCGGGCCGAAACACCATACTTGCTGAACTC GGATCATTGAACCTAGAATTCACGCGTCTATCTCAACTTACAAAGGACCCCAAATACTTTGATGCTATCCAGAGG ATAGCGGATTTTCTCGAGGATACTCAGGAGACAACCGACGTACCTGGGATGTGGCCCATGATGGTCAATGCTAAG GACTTGGAATTCGCTGATCCCAGGTTCACCATCGGTGGAATGGCTGACTCGACATATGAGTACCTCCCGAAAGAG CACATGCTGCTGGGAGGGCAGACGAACCAGTACCGTAGAATGTACAACTCCTTCATGAAGGCGATGAAGAGCCGC CTGCTTTTCCGCCCGATGACCGAAGACGGCCGAGATATTCTCTTTGCTGGGAACCTCCGCGTTACTGGGTCTTCT ACCCGGAGTAACCTGGAGCCCCAGTGGGAACATCTTAAGTGCTACCTTGGAGGTACTGTCGGCATAGGATCCAAG GTGTTTGACCGACCCGAAGATTTGGCTGTCGCGCGGAAGTTGGTCGATGGGTGCATTTGGGCATATGATATTATG CCGACCGGGATCATGCCAGAGATCTTGCATCTTACCGTGTGTAAGGACGATGAGAATTGCCAGTTACCTCAAAGC TCTCATCCCACAAGCACCTCAAAGGATGGCAAGAAACTGCCGCCAGGCGTAGTTGATATTCCCGACCCCAAGTAT CTACTACGACCCGAAGCTATTGAGTCGGTTTTCATAATGTACCGTATAACGGGGGACCGGTCTCTGCAGGATGCT GCGTGGAGGATGTTTCAAAATATCGACAAGATGACGCGGACCTCATTTGGACACGCAGCCATTTCCGATGTCCGG GACCCCGAGTCGCCGCAAATGGACTACATGGAAAGTTTCTGGCTGGCAGAGACTCTAAAGTACTTTTATCTCATA TTTTCCGAGCCGGACCTCGTGAATCTGGACGAATATGTGCTGAACACGGAAGCGCATCCCTTCAAGCGTCCAACT GCTTCAAGTACATAA |
| Gene | >Ani_SJS72_1|g8257.t1 ATGGCGCGACGGAGCTACCTCCTACCCACTATCATTCTCCTATGCATCACATACGCTCTTTTCTCGAGTCTACCG CCCGGTGCGGAACCACACTACCACCACCATTTCAGAAATCCATACGACCCCCCTCCACATAAAGAGGGTAGGATT CGTTGGCGGAAACATGCCGAGCAGTATCCAATCTCCGATTACATCCCCCTTCCTTCGACTGAGCCATCCACTATT CCCCGAATTCAGCACAAATTTCCTAGGGAGTCGTGGTTCGCACGATGGGGACGGGTAAAAAGGCAGCGTGCGGTC AAGAAGGCATTCCAGCACGCGTGGAAAGGATACAGGAACAATGCCTGGCTGGAAGACGAGCTCTCTCCCATCAGT GGCGGTCACCGCGAGACCTTTGCAGGCTGGGCAGCTACCTTGGTGGATTCCCTAGATACTCTTGTTATTATGGGA CTCACTGAGGAATTTGAGGAGGCTGTGAAAGCGCTGGAGTACATCGACTTCACTACCACCAGCGCCATTCAAATT AATGTCTTCGAGACCAATATCCGGTACTTGGGCGGGCTTCTTGGTGCCTACGACTTGACCCAGGGAAAATATCCG ATTCTCCTGAAGAAGGCAGTTGAGATTGCGGACATGATTTATGGTTCTTTTGACACTCGTAATCGGATGCCGCAA TCTCGGTGGGAATGGACCAGGTAAGACACCCGTGAAGCCAGATGCGGAGGTTACCAAGGGATATCTAGGTGTCGC TAGGGTACCCTTCTGACTCGGGCTGGGCCATGTTGACGGGAATCTAGATCTGCGGATGGTCTGAGCATCGAGCCG GGCCGAAACACCATACTTGCTGAACTCGGATCATTGAACCTAGAATTCACGCGTCTATCTCAACTTACAAAGGAC CCCAAATACTTTGATGCTATCCAGAGGATAGCGGATTTTCTCGAGGATACTCAGGAGACAACCGACGTACCTGGG ATGTGGCCCATGATGGTCAATGCTAAGGACTTGGAATTCGCTGATCCCAGGTTCACCATCGGTGGAATGGCTGAC TCGACATATGAGTACCTCCCGAAAGAGCACATGCTGCTGGGAGGGCAGACGAACCAGTACCGTAGAATGTACAAC TCCTTCATGAAGGCGATGAAGAGCCGCCTGCTTTTCCGCCCGATGACCGAAGACGGCCGAGATATTCTCTTTGCT GGGAACCTCCGCGTTACTGGGTCTTCTACCCGGAGTAACCTGGAGCCCCAGTGGGAACATCTTAAGTGCTACCTT GGAGGTACTGTCGGCATAGGATCCAAGGTGTTTGACCGACCCGAAGATTTGGCTGTCGCGCGGAAGTTGGTCGAT GGGTGCATTTGGGCATATGATATTATGCCGACCGGGATCATGCCAGAGATCTTGCATCTTACCGTGTGTAAGGAC GATGAGAATTGCCAGTTACCTCAAAGCTCTCATCCCACAAGCACCTCAAAGGATGGCAAGAAACTGCCGCCAGGC GTAGTTGATATTCCCGACCCCAAGTATCTACTACGGTATGTCTGTTTGGCTCATTTCTGGTGTTGCATTTTCCGT CTAATCCCATCTTAGACCCGAAGCTATTGAGTCGGTTTTCATAATGTACCGTATAACGGGGGACCGGTCTCTGCA GGATGCTGCGTGGAGGATGTTTCAAAATATCGACAAGATGACGCGGACCTCATTTGGACACGCAGCCATTTCCGA TGTCCGGGACCCCGAGTCGCCGCAAATGGACTACATGGAAAGTTTCTGGCTGGCAGAGACTCTAAAGTACTTTTA TCTCATATTTTCCGAGCCGGACCTCGTGAATCTGGACGAATATGTGCTGTAAGTTTTACAACTTGTTATCCGATC CTTCATGCGGATATTTTGCTAAAAAAAAAAAAAAAAAAATTGAGCAGGAACACGGAAGCGCATCCCTTCAAGCGT CCAACTGCTTCAAGTACATAA |