Protein ID | Ani_SJS72_1|g8254.t1 |
Gene name | |
Location | scaffold_074:132350..133716 |
Strand | - |
Gene length (bp) | 1366 |
Transcript length (bp) | 1176 |
Coding sequence length (bp) | 1176 |
Protein length (aa) | 392 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05739 | SNARE | SNARE domain | 1.2E-12 | 275 | 327 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 313 | 330 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8254.t1 MWRDRTNLYISYRQSFAHHPAKKPRYLGASNGFSDSLSQPEESRRLISETGGLDDDGDAIIEMDVLPPRWVDVQE EVTELLADIAQKSSHLDKLHQKHLLPGFGDEDVRKQDEVVIERLTQDITRAFHECQKAVKKIETMVREAQQQGGV SSGDETMAKNLQISLAARVQEASARFRKKQSTYLKKLRGLEGGSAPFERSPTPMQNPYTDPSLMESDADKSFSQS TLMQTSQRLTGQNDAAIEQREREINDIAKGIIELSDIFRELQSMVIDQGTMLDRIDYNIERMGTEVKAADKELKV ATNYQRRTVKRKIMLLLVIIVAGLFIVLLVKPKKHSSPDPAPAPAPPPPPQTNEQPPAMAPRAFHTIYRRKRSPS SLRTARNKWGDPDIFR* |
Coding | >Ani_SJS72_1|g8254.t1 ATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGT TATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACA GGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAG GAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTA CCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGC GCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTT AGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGG TTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCC CCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCT ACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAAC GACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACT ATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTG GCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTT ATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCG CAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCT TCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCGATAG |
Transcript | >Ani_SJS72_1|g8254.t1 ATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGT TATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACA GGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAG GAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTA CCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGC GCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTT AGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGG TTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCC CCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCT ACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAAC GACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACT ATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTG GCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTT ATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCG CAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCT TCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCGATAG |
Gene | >Ani_SJS72_1|g8254.t1 ATGTGGCGGGACCGTACCAACCTGTAATGCATCCCGGGCTAAGTTATGGTGGATAGCGAAAATAAGGAACTAACA ACTATCTCAAAACAGCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACGTTATCTCGG AGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACAGGAGGACT CGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGAGGAAGTGAC GGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTACCTGGATT CGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCGCGCCTTCCA TGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTTAGCAGCGG CGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCGGTTTCGGAA GAAACAGAGTACCTATTTGAAGAGTGAGTTTATCCTGGGCTCAGCTGCGTCTGTTCGTTGAGCTAACCGAGTTGC CTGGTAGAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCCCCGACACCGATGCAGAATCCATAC ACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATCTACACTAATGCAAACGTCTCAACGA CTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAACGACATCGCGAAAGGAATTATCGAG CTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTACTATGCTGGATCGGATAGACTATAAT ATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTGGTACGTTTGCGTCCGGTGCAGCCA CCCGAAGTTAAGTTTCCACTAACCAATCTGCATCTTGTAGGCTACGAACTACCAACGACGTACAGTGAAGCGCAA GATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTTATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTC CCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCGCAAACTAATGAACAGCCGCCCGCAATGGCTCCTCG TGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTCTTCGTTACGGACTGCGAGAAACAAATGGGGTGATCC GGATATATTTCGATAG |