Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g8219.t1
Gene name
Location	scaffold_074:37416..38223
Strand	+
Gene length (bp)	807
Transcript length (bp)	621
Coding sequence length (bp)	621
Protein length (aa)	207

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08229	SHR3_chaperone	ER membrane protein SH3	1.0E-79	6	205

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	61	83	22
3	90	112	22
4	149	167	18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g8219.t1 MAFRNGSFATFLIVCPTSFFLGLIFSLFPYDYPILWSTTPTPATHFDYFESHLRFLHASPPLIPRILHIVIFLGL LGLIMKLYKPSESNMLFDGASLVLYMCGITVYIANIVKGLRLVSGGVYGDELVKGGEEEVEQGQILGREDSLKVL AASNTILALVLVGVLVLQAGQWYAERKEAQEVESFASSSSKGKKEEGSEGGKKKKN*
Coding	>Ani_SJS72_1\|g8219.t1 ATGGCCTTCCGCAACGGGTCCTTCGCGACCTTCCTCATTGTCTGCCCAACATCCTTCTTCCTCGGCCTGATCTTC TCCCTCTTCCCCTACGACTACCCGATCCTATGGTCCACGACCCCGACCCCAGCCACCCACTTCGACTACTTCGAA TCCCACCTGCGATTCCTGCACGCCTCGCCGCCCCTAATCCCGCGGATTCTCCACATCGTGATATTCCTCGGCCTC TTGGGACTTATCATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTAT ATGTGTGGAATTACGGTCTATATTGCGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGAT GAGTTGGTCAAAGGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTG GCGGCGAGTAATACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAG AGGAAGGAGGCGCAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGG GGGAAGAAGAAGAAGAATTGA
Transcript	>Ani_SJS72_1\|g8219.t1 ATGGCCTTCCGCAACGGGTCCTTCGCGACCTTCCTCATTGTCTGCCCAACATCCTTCTTCCTCGGCCTGATCTTC TCCCTCTTCCCCTACGACTACCCGATCCTATGGTCCACGACCCCGACCCCAGCCACCCACTTCGACTACTTCGAA TCCCACCTGCGATTCCTGCACGCCTCGCCGCCCCTAATCCCGCGGATTCTCCACATCGTGATATTCCTCGGCCTC TTGGGACTTATCATGAAGCTGTACAAACCCTCGGAATCGAATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTAT ATGTGTGGAATTACGGTCTATATTGCGAATATTGTGAAGGGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGAT GAGTTGGTCAAAGGTGGGGAGGAGGAGGTCGAGCAAGGGCAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTG GCGGCGAGTAATACTATCTTGGCGCTGGTGTTGGTGGGTGTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAG AGGAAGGAGGCGCAGGAGGTGGAGAGTTTTGCTTCTTCGAGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGG GGGAAGAAGAAGAAGAATTGA
Gene	>Ani_SJS72_1\|g8219.t1 ATGGCCTTCCGCAACGGGTCCTTCGCGACCTTCCTCATTGTCTGCCGTACGGGGGGGGGGGGGGGGGGGGCGGGG GGGGCGGGGCGGGGGGGGGGGGGCGGGGNNNNNNNNNNCCCCAGCCCTCCTCGTCGCCGCCACCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCACACACACCCCCCCCCCCCCCCCCCCCCCGGCGGAAATACTAACGAAGTAATAAAA ACAACAGCAACATCCTTCTTCCTCGGCCTGATCTTCTCCCTCTTCCCCTACGACTACCCGATCCTATGGTCCACG ACCCCGACCCCAGCCACCCACTTCGACTACTTCGAATCCCACCTGCGATTCCTGCACGCCTCGCCGCCCCTAATC CCGCGGATTCTCCACATCGTGATATTCCTCGGCCTCTTGGGACTTATCATGAAGCTGTACAAACCCTCGGAATCG AATATGTTGTTCGATGGCGCCAGTCTCGTGCTGTATATGTGTGGAATTACGGTCTATATTGCGAATATTGTGAAG GGGTTGAGGTTGGTTAGTGGTGGGGTTTATGGGGATGAGTTGGTCAAAGGTGGGGAGGAGGAGGTCGAGCAAGGG CAGATTCTGGGTAGGGAGGATAGTTTGAAGGTGTTGGCGGCGAGTAATACTATCTTGGCGCTGGTGTTGGTGGGT GTGCTGGTGTTGCAGGCCGGGCAGTGGTATGCGGAGAGGAAGGAGGCGCAGGAGGTGGAGAGTTTTGCTTCTTCG AGTTCGAAGGGGAAGAAGGAGGAGGGGAGTGAGGGGGGGAAGAAGAAGAAGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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