© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8201.t1 |
| Gene name | |
| Location | scaffold_073:131148..134177 |
| Strand | + |
| Gene length (bp) | 3029 |
| Transcript length (bp) | 2964 |
| Coding sequence length (bp) | 2964 |
| Protein length (aa) | 988 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 3.9E-28 | 118 | 256 |
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 3.3E-23 | 824 | 978 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 110 | 132 | 22 |
| 3 | 139 | 161 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 215 | 232 | 17 |
| 6 | 242 | 264 | 22 |
| 7 | 752 | 774 | 22 |
| 8 | 784 | 806 | 22 |
| 9 | 818 | 840 | 22 |
| 10 | 850 | 872 | 22 |
| 11 | 885 | 907 | 22 |
| 12 | 935 | 957 | 22 |
| 13 | 964 | 986 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8201.t1 MSPLLMPKFLSRSPASQKRGYSARPFWACLLAFFLLAILSWVSGRLAEPTERVSVHHVAQLRMRDNALECRLVRQ AKDQCAFVLSNCADHEEGLFSYLQFYYCTAAKAKPLAFIVIVLWLSLLFSTIGIAASDFLCIDLSTLASVLGLSE SLTGVTFLAFGNGSPDVFSTFAAMRSNSGSLAIGELLGAASFITSIVAGSMALVRPFKVARRSFVRDVGYFILAM AFSMYLLGDGRLHVWESAMMVALYCFYVALVVTWHWYLTRQRRSYERNLAARSHFHIPDNQELDIEEEEEDDPGV ASEATSLLHGEDFDALERSGVPAWREGEEDDETRNRYLAEIRDNMHIYRPTTRRRNTLNPIRPSLVGALEFQSVL SSLQRSRNIHRNESFDLERCSDGERSRSHSRLSDNASVVSHPRASRPSLGDRLSPNGGTGSARTRAVSANAAADL KLDTSMFTVNNQQPLLTVHRPSVDTQSPSETTGALASDQSPGSSGSPQLAVSQAPSTESNTHLQSPNLLAPPGAF HAPTYQVSSSRPRSPLPLSPRGTTLSPGPANAFPESPTSPFPPFQDVPSFPSSGAPSLRLPAASSPTERLQIHDS ALDGGSNRTTTPTWWSHLSLTSQPILPTLFPTLADWKSKSFWERLLGIVAAPSVLLLTITLPVVEPVQPEAGASA VPVIVTPADGDGAPSPAVRLPEDSPLLRALDQEPISRRNTVDQNGKPEPIPRHSRFDSELPAIQPNIDSPPPPSK EWCLWLVWVQLFVGPFFVALMYWTTVDSDLDVEHLLLPSMVSLLFSLICTTCLMISTRHDLASQPPTAWRPVLAF LGFIVAICWIATIATEVVSLLKTLGVILNISDSLLGLTVFAVGNSLGDLVADITVARLGYPVMALSACFGGPMLN ILLGIGLGGLYMTVNAKPEAIAVSGGSYEIEVSKVLVISGATLLITLIGLLIVVPLNNWRMDQKIGWGLVILWVI STLGNVLAEVLF* |
| Coding | >Ani_SJS72_1|g8201.t1 ATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGAAGTCCCGCTTCTCAGAAGCGTGGATATTCGGCCAGACCT TTTTGGGCGTGTTTACTGGCTTTCTTCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTCTGGCCGAGCCTACC GAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGAATGCGGGACAACGCGCTGGAGTGTCGTCTCGTCCGTCAA GCCAAAGATCAATGTGCCTTCGTCCTATCAAACTGCGCCGATCACGAGGAGGGTCTCTTCTCCTACCTCCAGTTC TACTACTGCACTGCGGCAAAGGCCAAGCCGCTCGCTTTCATCGTCATCGTCCTGTGGCTATCGCTTCTCTTCAGC ACCATCGGCATTGCTGCCAGCGACTTCCTCTGTATAGATCTAAGCACCTTGGCCAGTGTCCTCGGTTTGAGTGAG AGCCTCACGGGTGTCACCTTTCTTGCATTCGGAAATGGCAGCCCGGACGTGTTTTCCACCTTCGCCGCCATGCGG TCGAATAGTGGGAGCCTGGCCATTGGAGAGCTGCTCGGTGCGGCAAGCTTCATCACATCCATCGTTGCTGGCTCA ATGGCGCTGGTCCGCCCCTTCAAGGTCGCCCGGAGGAGTTTCGTTCGTGACGTAGGATATTTTATCCTTGCGATG GCCTTTAGTATGTATCTTTTGGGCGATGGCCGCCTCCATGTCTGGGAATCTGCCATGATGGTGGCGCTCTATTGT TTCTATGTTGCATTGGTGGTGACGTGGCACTGGTATTTGACTCGACAACGGCGCTCCTACGAGAGGAATCTAGCT GCTCGATCACACTTCCACATTCCGGACAATCAGGAACTTGACATCGAAGAAGAGGAGGAAGATGACCCTGGTGTC GCGTCGGAGGCTACAAGTCTCCTTCACGGCGAGGATTTCGACGCCCTGGAGAGATCTGGTGTGCCAGCCTGGCGA GAAGGGGAGGAGGACGACGAAACCCGGAATCGATACCTTGCTGAGATCCGCGACAACATGCACATTTATCGGCCT ACTACAAGGAGGCGCAATACGTTGAACCCCATCAGACCAAGTCTAGTGGGTGCTTTGGAGTTTCAGTCCGTCCTC TCTTCACTTCAACGGTCGCGGAATATCCATCGCAACGAGTCGTTTGATCTCGAGCGATGCTCAGATGGTGAGCGT TCGCGCTCGCATTCGCGCCTGTCAGACAATGCCTCTGTAGTGTCTCATCCGCGGGCCAGCCGTCCCTCGTTGGGT GACCGCTTGTCGCCCAATGGAGGCACTGGTTCAGCCCGCACTCGAGCGGTGTCAGCCAACGCCGCCGCCGATCTG AAACTAGACACAAGCATGTTCACTGTCAATAATCAGCAGCCGCTCCTCACTGTTCATCGGCCCTCTGTGGATACC CAATCGCCATCAGAAACAACGGGCGCCTTAGCATCCGATCAGAGCCCAGGTTCAAGCGGCTCCCCTCAGCTGGCC GTCTCGCAAGCCCCCAGTACTGAGTCGAACACGCATCTTCAGAGCCCCAACCTCCTTGCGCCCCCTGGTGCTTTC CATGCCCCAACTTATCAAGTGTCGAGTTCTCGTCCTCGTTCGCCGCTTCCATTGTCCCCGCGCGGAACGACCCTC TCCCCAGGCCCGGCCAATGCTTTCCCGGAGAGTCCTACAAGCCCATTCCCACCCTTTCAAGATGTACCCAGTTTC CCATCCTCTGGGGCACCGAGCTTACGCCTGCCAGCCGCATCAAGCCCGACGGAGCGGTTGCAGATTCACGATAGC GCCTTGGATGGTGGGAGTAACCGGACGACAACCCCGACATGGTGGTCCCATCTGTCGCTCACTTCCCAGCCCATC CTCCCCACCCTTTTCCCGACTCTGGCTGACTGGAAATCCAAATCTTTCTGGGAACGACTCTTGGGAATTGTTGCG GCCCCCAGTGTATTGCTCCTGACAATCACCCTCCCGGTGGTTGAACCTGTACAACCTGAAGCGGGTGCAAGCGCT GTTCCCGTCATAGTAACTCCGGCGGACGGTGACGGTGCACCATCACCTGCTGTGCGACTGCCGGAAGATAGTCCA CTTCTTCGTGCGCTCGATCAAGAGCCCATTTCACGACGGAACACAGTTGATCAAAACGGCAAGCCAGAACCAATT CCGAGACATTCTCGTTTTGATTCCGAATTGCCGGCCATCCAGCCAAACATAGATTCCCCACCACCACCATCGAAA GAGTGGTGCCTTTGGCTAGTTTGGGTGCAACTCTTCGTGGGCCCCTTCTTCGTGGCCTTGATGTACTGGACGACA GTTGACTCGGATCTGGATGTCGAACATCTTCTCCTGCCGTCCATGGTCTCTCTTCTCTTTTCTTTGATATGCACC ACCTGCCTGATGATCAGCACACGACACGACCTCGCTTCCCAGCCTCCAACTGCCTGGCGGCCCGTTCTAGCATTT TTAGGCTTCATTGTCGCAATCTGCTGGATCGCAACCATCGCCACCGAGGTTGTCAGCCTGCTCAAGACCCTAGGC GTTATCTTGAACATCAGTGACTCGCTTCTCGGCCTGACCGTGTTTGCAGTGGGTAATTCCTTGGGTGACCTGGTA GCAGACATCACGGTAGCCCGCCTAGGATATCCCGTAATGGCGCTGAGCGCCTGTTTCGGAGGCCCCATGCTCAAT ATTCTTCTAGGTATTGGCCTAGGCGGACTATACATGACCGTGAATGCCAAACCAGAAGCCATCGCCGTGTCGGGT GGTTCTTACGAGATTGAAGTCTCCAAGGTCCTCGTCATCAGCGGTGCTACTCTACTCATCACCTTGATTGGTCTG CTGATCGTCGTCCCCTTGAATAATTGGAGGATGGACCAGAAGATTGGCTGGGGCCTGGTCATTCTCTGGGTCATT AGTACACTTGGCAATGTTCTCGCCGAGGTTCTATTCTGA |
| Transcript | >Ani_SJS72_1|g8201.t1 ATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGAAGTCCCGCTTCTCAGAAGCGTGGATATTCGGCCAGACCT TTTTGGGCGTGTTTACTGGCTTTCTTCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTCTGGCCGAGCCTACC GAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGAATGCGGGACAACGCGCTGGAGTGTCGTCTCGTCCGTCAA GCCAAAGATCAATGTGCCTTCGTCCTATCAAACTGCGCCGATCACGAGGAGGGTCTCTTCTCCTACCTCCAGTTC TACTACTGCACTGCGGCAAAGGCCAAGCCGCTCGCTTTCATCGTCATCGTCCTGTGGCTATCGCTTCTCTTCAGC ACCATCGGCATTGCTGCCAGCGACTTCCTCTGTATAGATCTAAGCACCTTGGCCAGTGTCCTCGGTTTGAGTGAG AGCCTCACGGGTGTCACCTTTCTTGCATTCGGAAATGGCAGCCCGGACGTGTTTTCCACCTTCGCCGCCATGCGG TCGAATAGTGGGAGCCTGGCCATTGGAGAGCTGCTCGGTGCGGCAAGCTTCATCACATCCATCGTTGCTGGCTCA ATGGCGCTGGTCCGCCCCTTCAAGGTCGCCCGGAGGAGTTTCGTTCGTGACGTAGGATATTTTATCCTTGCGATG GCCTTTAGTATGTATCTTTTGGGCGATGGCCGCCTCCATGTCTGGGAATCTGCCATGATGGTGGCGCTCTATTGT TTCTATGTTGCATTGGTGGTGACGTGGCACTGGTATTTGACTCGACAACGGCGCTCCTACGAGAGGAATCTAGCT GCTCGATCACACTTCCACATTCCGGACAATCAGGAACTTGACATCGAAGAAGAGGAGGAAGATGACCCTGGTGTC GCGTCGGAGGCTACAAGTCTCCTTCACGGCGAGGATTTCGACGCCCTGGAGAGATCTGGTGTGCCAGCCTGGCGA GAAGGGGAGGAGGACGACGAAACCCGGAATCGATACCTTGCTGAGATCCGCGACAACATGCACATTTATCGGCCT ACTACAAGGAGGCGCAATACGTTGAACCCCATCAGACCAAGTCTAGTGGGTGCTTTGGAGTTTCAGTCCGTCCTC TCTTCACTTCAACGGTCGCGGAATATCCATCGCAACGAGTCGTTTGATCTCGAGCGATGCTCAGATGGTGAGCGT TCGCGCTCGCATTCGCGCCTGTCAGACAATGCCTCTGTAGTGTCTCATCCGCGGGCCAGCCGTCCCTCGTTGGGT GACCGCTTGTCGCCCAATGGAGGCACTGGTTCAGCCCGCACTCGAGCGGTGTCAGCCAACGCCGCCGCCGATCTG AAACTAGACACAAGCATGTTCACTGTCAATAATCAGCAGCCGCTCCTCACTGTTCATCGGCCCTCTGTGGATACC CAATCGCCATCAGAAACAACGGGCGCCTTAGCATCCGATCAGAGCCCAGGTTCAAGCGGCTCCCCTCAGCTGGCC GTCTCGCAAGCCCCCAGTACTGAGTCGAACACGCATCTTCAGAGCCCCAACCTCCTTGCGCCCCCTGGTGCTTTC CATGCCCCAACTTATCAAGTGTCGAGTTCTCGTCCTCGTTCGCCGCTTCCATTGTCCCCGCGCGGAACGACCCTC TCCCCAGGCCCGGCCAATGCTTTCCCGGAGAGTCCTACAAGCCCATTCCCACCCTTTCAAGATGTACCCAGTTTC CCATCCTCTGGGGCACCGAGCTTACGCCTGCCAGCCGCATCAAGCCCGACGGAGCGGTTGCAGATTCACGATAGC GCCTTGGATGGTGGGAGTAACCGGACGACAACCCCGACATGGTGGTCCCATCTGTCGCTCACTTCCCAGCCCATC CTCCCCACCCTTTTCCCGACTCTGGCTGACTGGAAATCCAAATCTTTCTGGGAACGACTCTTGGGAATTGTTGCG GCCCCCAGTGTATTGCTCCTGACAATCACCCTCCCGGTGGTTGAACCTGTACAACCTGAAGCGGGTGCAAGCGCT GTTCCCGTCATAGTAACTCCGGCGGACGGTGACGGTGCACCATCACCTGCTGTGCGACTGCCGGAAGATAGTCCA CTTCTTCGTGCGCTCGATCAAGAGCCCATTTCACGACGGAACACAGTTGATCAAAACGGCAAGCCAGAACCAATT CCGAGACATTCTCGTTTTGATTCCGAATTGCCGGCCATCCAGCCAAACATAGATTCCCCACCACCACCATCGAAA GAGTGGTGCCTTTGGCTAGTTTGGGTGCAACTCTTCGTGGGCCCCTTCTTCGTGGCCTTGATGTACTGGACGACA GTTGACTCGGATCTGGATGTCGAACATCTTCTCCTGCCGTCCATGGTCTCTCTTCTCTTTTCTTTGATATGCACC ACCTGCCTGATGATCAGCACACGACACGACCTCGCTTCCCAGCCTCCAACTGCCTGGCGGCCCGTTCTAGCATTT TTAGGCTTCATTGTCGCAATCTGCTGGATCGCAACCATCGCCACCGAGGTTGTCAGCCTGCTCAAGACCCTAGGC GTTATCTTGAACATCAGTGACTCGCTTCTCGGCCTGACCGTGTTTGCAGTGGGTAATTCCTTGGGTGACCTGGTA GCAGACATCACGGTAGCCCGCCTAGGATATCCCGTAATGGCGCTGAGCGCCTGTTTCGGAGGCCCCATGCTCAAT ATTCTTCTAGGTATTGGCCTAGGCGGACTATACATGACCGTGAATGCCAAACCAGAAGCCATCGCCGTGTCGGGT GGTTCTTACGAGATTGAAGTCTCCAAGGTCCTCGTCATCAGCGGTGCTACTCTACTCATCACCTTGATTGGTCTG CTGATCGTCGTCCCCTTGAATAATTGGAGGATGGACCAGAAGATTGGCTGGGGCCTGGTCATTCTCTGGGTCATT AGTACACTTGGCAATGTTCTCGCCGAGGTTCTATTCTGA |
| Gene | >Ani_SJS72_1|g8201.t1 ATGTCTCCTCTATTAATGCCCAAGTTCCTTTCTCGAAGTCCCGCTTCTCAGAAGCGTGGATATTCGGCCAGACCT TTTTGGGCGTGTTTACTGGCTTTCTTCCTCCTTGCTATTCTCAGCTGGGTCTCTGGTCGTCTGGCCGAGCCTACC GAGCGGGTCTCGGTTCACCATGTCGCTCAGCTTCGAATGCGGGACAACGCGCTGGAGGTATGATGAGGATAACCT TACCTAGCGAATTGGGGACTTGCTAAGCTTGCTGTTCTGATTGACAGTGTCGTCTCGTCCGTCAAGCCAAAGATC AATGTGCCTTCGTCCTATCAAACTGCGCCGATCACGAGGAGGGTCTCTTCTCCTACCTCCAGTTCTACTACTGCA CTGCGGCAAAGGCCAAGCCGCTCGCTTTCATCGTCATCGTCCTGTGGCTATCGCTTCTCTTCAGCACCATCGGCA TTGCTGCCAGCGACTTCCTCTGTATAGATCTAAGCACCTTGGCCAGTGTCCTCGGTTTGAGTGAGAGCCTCACGG GTGTCACCTTTCTTGCATTCGGAAATGGCAGCCCGGACGTGTTTTCCACCTTCGCCGCCATGCGGTCGAATAGTG GGAGCCTGGCCATTGGAGAGCTGCTCGGTGCGGCAAGCTTCATCACATCCATCGTTGCTGGCTCAATGGCGCTGG TCCGCCCCTTCAAGGTCGCCCGGAGGAGTTTCGTTCGTGACGTAGGATATTTTATCCTTGCGATGGCCTTTAGTA TGTATCTTTTGGGCGATGGCCGCCTCCATGTCTGGGAATCTGCCATGATGGTGGCGCTCTATTGTTTCTATGTTG CATTGGTGGTGACGTGGCACTGGTATTTGACTCGACAACGGCGCTCCTACGAGAGGAATCTAGCTGCTCGATCAC ACTTCCACATTCCGGACAATCAGGAACTTGACATCGAAGAAGAGGAGGAAGATGACCCTGGTGTCGCGTCGGAGG CTACAAGTCTCCTTCACGGCGAGGATTTCGACGCCCTGGAGAGATCTGGTGTGCCAGCCTGGCGAGAAGGGGAGG AGGACGACGAAACCCGGAATCGATACCTTGCTGAGATCCGCGACAACATGCACATTTATCGGCCTACTACAAGGA GGCGCAATACGTTGAACCCCATCAGACCAAGTCTAGTGGGTGCTTTGGAGTTTCAGTCCGTCCTCTCTTCACTTC AACGGTCGCGGAATATCCATCGCAACGAGTCGTTTGATCTCGAGCGATGCTCAGATGGTGAGCGTTCGCGCTCGC ATTCGCGCCTGTCAGACAATGCCTCTGTAGTGTCTCATCCGCGGGCCAGCCGTCCCTCGTTGGGTGACCGCTTGT CGCCCAATGGAGGCACTGGTTCAGCCCGCACTCGAGCGGTGTCAGCCAACGCCGCCGCCGATCTGAAACTAGACA CAAGCATGTTCACTGTCAATAATCAGCAGCCGCTCCTCACTGTTCATCGGCCCTCTGTGGATACCCAATCGCCAT CAGAAACAACGGGCGCCTTAGCATCCGATCAGAGCCCAGGTTCAAGCGGCTCCCCTCAGCTGGCCGTCTCGCAAG CCCCCAGTACTGAGTCGAACACGCATCTTCAGAGCCCCAACCTCCTTGCGCCCCCTGGTGCTTTCCATGCCCCAA CTTATCAAGTGTCGAGTTCTCGTCCTCGTTCGCCGCTTCCATTGTCCCCGCGCGGAACGACCCTCTCCCCAGGCC CGGCCAATGCTTTCCCGGAGAGTCCTACAAGCCCATTCCCACCCTTTCAAGATGTACCCAGTTTCCCATCCTCTG GGGCACCGAGCTTACGCCTGCCAGCCGCATCAAGCCCGACGGAGCGGTTGCAGATTCACGATAGCGCCTTGGATG GTGGGAGTAACCGGACGACAACCCCGACATGGTGGTCCCATCTGTCGCTCACTTCCCAGCCCATCCTCCCCACCC TTTTCCCGACTCTGGCTGACTGGAAATCCAAATCTTTCTGGGAACGACTCTTGGGAATTGTTGCGGCCCCCAGTG TATTGCTCCTGACAATCACCCTCCCGGTGGTTGAACCTGTACAACCTGAAGCGGGTGCAAGCGCTGTTCCCGTCA TAGTAACTCCGGCGGACGGTGACGGTGCACCATCACCTGCTGTGCGACTGCCGGAAGATAGTCCACTTCTTCGTG CGCTCGATCAAGAGCCCATTTCACGACGGAACACAGTTGATCAAAACGGCAAGCCAGAACCAATTCCGAGACATT CTCGTTTTGATTCCGAATTGCCGGCCATCCAGCCAAACATAGATTCCCCACCACCACCATCGAAAGAGTGGTGCC TTTGGCTAGTTTGGGTGCAACTCTTCGTGGGCCCCTTCTTCGTGGCCTTGATGTACTGGACGACAGTTGACTCGG ATCTGGATGTCGAACATCTTCTCCTGCCGTCCATGGTCTCTCTTCTCTTTTCTTTGATATGCACCACCTGCCTGA TGATCAGCACACGACACGACCTCGCTTCCCAGCCTCCAACTGCCTGGCGGCCCGTTCTAGCATTTTTAGGCTTCA TTGTCGCAATCTGCTGGATCGCAACCATCGCCACCGAGGTTGTCAGCCTGCTCAAGACCCTAGGCGTTATCTTGA ACATCAGTGACTCGCTTCTCGGCCTGACCGTGTTTGCAGTGGGTAATTCCTTGGGTGACCTGGTAGCAGACATCA CGGTAGCCCGCCTAGGATATCCCGTAATGGCGCTGAGCGCCTGTTTCGGAGGCCCCATGCTCAATATTCTTCTAG GTATTGGCCTAGGCGGACTATACATGACCGTGAATGCCAAACCAGAAGCCATCGCCGTGTCGGGTGGTTCTTACG AGATTGAAGTCTCCAAGGTCCTCGTCATCAGCGGTGCTACTCTACTCATCACCTTGATTGGTCTGCTGATCGTCG TCCCCTTGAATAATTGGAGGATGGACCAGAAGATTGGCTGGGGCCTGGTCATTCTCTGGGTCATTAGTACACTTG GCAATGTTCTCGCCGAGGTTCTATTCTGA |