© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g8184.t1 |
| Gene name | |
| Location | scaffold_073:80180..81105 |
| Strand | - |
| Gene length (bp) | 925 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14880 | COX14 | Cytochrome oxidase c assembly | 1.6E-18 | 85 | 141 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 100 | 122 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8184.t1 MSRSAADATRFTATGPYAHSKPGSASAAAPYKLPSSMAKPTSQQQQQPQLNANGRPESPKEKVERLRAQARAARL AQSTSRVDQMIEVGRRFANKAHKTMVYTLIAASGVCGALTVYSVISLTLYNRRQRALWVEKEMQRLQDAKTAYAA GTANTEQLELLKNEKIGEIFQQKKEEAKAQRPWNQVKNFFFGGLKQDEKAAADSSSSIPDSVLEGGSKSAVLEAL NAKAAEDAAKSAPAAAAPKGPLDALAENAEDAAKQSTRSWKSWFTGR* |
| Coding | >Ani_SJS72_1|g8184.t1 ATGTCCCGCTCCGCTGCAGACGCGACCCGGTTCACGGCCACCGGGCCCTACGCACACTCCAAGCCCGGCTCGGCC AGCGCGGCGGCCCCCTACAAGCTCCCTAGCTCGATGGCCAAGCCCACCTCCCAGCAACAGCAACAGCCGCAGTTA AACGCCAATGGCAGACCGGAGTCCCCCAAGGAAAAGGTTGAGCGGTTGAGGGCCCAGGCCCGCGCTGCCCGGTTA GCTCAGTCAACATCGCGGGTGGATCAGATGATTGAGGTAGGACGTCGGTTTGCGAACAAGGCGCATAAGACGATG GTGTACACGCTGATTGCTGCATCTGGTGTCTGCGGAGCTCTAACAGTCTACTCCGTCATCTCTTTAACGCTATAC AACCGTCGGCAGCGGGCTCTGTGGGTGGAGAAGGAGATGCAGAGACTGCAGGATGCGAAGACGGCGTATGCTGCC GGTACGGCTAACACGGAGCAATTGGAGCTGCTCAAGAATGAGAAGATCGGGGAGATCTTCCAGCAGAAGAAGGAG GAGGCGAAGGCGCAGCGGCCCTGGAATCAGGTCAAGAACTTCTTCTTTGGTGGTTTGAAGCAGGATGAGAAGGCT GCTGCTGATAGCAGCAGCTCTATCCCCGATAGTGTCTTGGAGGGCGGCAGCAAGTCCGCAGTGCTGGAGGCGCTG AACGCTAAGGCTGCGGAGGACGCGGCTAAGTCTGCTCCTGCCGCTGCTGCTCCTAAGGGCCCGCTGGATGCGTTG GCTGAGAATGCGGAAGATGCTGCGAAGCAGTCGACGCGAAGCTGGAAGAGCTGGTTTACTGGACGGTAA |
| Transcript | >Ani_SJS72_1|g8184.t1 ATGTCCCGCTCCGCTGCAGACGCGACCCGGTTCACGGCCACCGGGCCCTACGCACACTCCAAGCCCGGCTCGGCC AGCGCGGCGGCCCCCTACAAGCTCCCTAGCTCGATGGCCAAGCCCACCTCCCAGCAACAGCAACAGCCGCAGTTA AACGCCAATGGCAGACCGGAGTCCCCCAAGGAAAAGGTTGAGCGGTTGAGGGCCCAGGCCCGCGCTGCCCGGTTA GCTCAGTCAACATCGCGGGTGGATCAGATGATTGAGGTAGGACGTCGGTTTGCGAACAAGGCGCATAAGACGATG GTGTACACGCTGATTGCTGCATCTGGTGTCTGCGGAGCTCTAACAGTCTACTCCGTCATCTCTTTAACGCTATAC AACCGTCGGCAGCGGGCTCTGTGGGTGGAGAAGGAGATGCAGAGACTGCAGGATGCGAAGACGGCGTATGCTGCC GGTACGGCTAACACGGAGCAATTGGAGCTGCTCAAGAATGAGAAGATCGGGGAGATCTTCCAGCAGAAGAAGGAG GAGGCGAAGGCGCAGCGGCCCTGGAATCAGGTCAAGAACTTCTTCTTTGGTGGTTTGAAGCAGGATGAGAAGGCT GCTGCTGATAGCAGCAGCTCTATCCCCGATAGTGTCTTGGAGGGCGGCAGCAAGTCCGCAGTGCTGGAGGCGCTG AACGCTAAGGCTGCGGAGGACGCGGCTAAGTCTGCTCCTGCCGCTGCTGCTCCTAAGGGCCCGCTGGATGCGTTG GCTGAGAATGCGGAAGATGCTGCGAAGCAGTCGACGCGAAGCTGGAAGAGCTGGTTTACTGGACGGTAA |
| Gene | >Ani_SJS72_1|g8184.t1 ATGTCCCGCTCCGCTGCAGACGCGACCCGGTTCACGGCCACCGGGCCCTACGCACACTCCAAGCCCGGCTCGGCC AGCGCGGCGGCCCCCTACAAGCTCCCTAGCTCGATGGCCAAGCCCACCTCCCAGCAACAGCAACAGCCGCAGTTA AACGCCAATGGCAGACCGGAGTCCCCCAAGGAAAAGGTTGAGCGGTTGAGGGCCCAGGCCCGCGCTGCCCGGTTA GCTCAGTCAACATCGCGGGTGGATCAGATGATTGAGGTAGGACGTCGGTTTGCGAACAAGGCGCATAAGACGATG GTGTACACGCTGATTGCTGCATCTGGTATGTCCATCATTACAAGGAAGTGACGACGGAAATTGACTACACATACG TGTGGCCGCCGCGAGGATATAAACCATTGACTAACGCGTTTCGGGAATGAAATCAGGTGTCTGCGGAGCTCTAAC AGTCTACTCCGTCATCTCTTTAACGCTATACAACCGTCGGCAGCGGGCTCTGTGGGTGGAGAAGGAGATGCAGAG ACTGCAGGATGCGAAGACGGCGTATGCTGCCGGTACGGCTAACACGGAGCAATTGGAGCTGCTCAAGAATGAGAA GATCGGGGAGATCTTCCAGCAGAAGAAGGAGGAGGCGAAGGCGCAGCGGCCCTGGAATCAGGTCAAGAACTTCTT CTTTGGTGGTTTGAAGCAGGATGAGAAGGCTGCTGCTGATAGCAGCAGCTCTATCCCCGATAGTGTCTTGGAGGG CGGCAGCAAGTCCGCAGTGCTGGAGGCGCTGAACGCTAAGGCTGCGGAGGACGCGGCTAAGTCTGCTCCTGCCGC TGCTGCTCCTAAGGGCCCGCTGGATGCGTTGGCTGAGAATGCGGAAGATGCTGCGAAGCAGTCGACGCGAAGCTG GAAGAGCTGGTTTACTGGACGGTAA |