© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8170.t1 |
| Gene name | |
| Location | scaffold_073:42881..44439 |
| Strand | - |
| Gene length (bp) | 1558 |
| Transcript length (bp) | 1479 |
| Coding sequence length (bp) | 1479 |
| Protein length (aa) | 493 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.6E-42 | 60 | 441 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.4E-12 | 64 | 241 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 92 | 114 | 22 |
| 2 | 146 | 168 | 22 |
| 3 | 181 | 203 | 22 |
| 4 | 208 | 230 | 22 |
| 5 | 284 | 306 | 22 |
| 6 | 321 | 343 | 22 |
| 7 | 364 | 383 | 19 |
| 8 | 388 | 410 | 22 |
| 9 | 423 | 445 | 22 |
| 10 | 455 | 477 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8170.t1 MASNQDQDLEACPKTLTPNPPIKAEASKDPNLVTWNSPNDPGNPKNWPRGLKWQNTWSVSLFVFISPVSSSMIAP AMNDLAQSLDMHAEIEIYLSLSIFILAYAIGPVFFGPASELYGRVRLLQLSNVWYLAWNLGCGFARTKGQLFAFR FLAGIGGSAPLAIGGGTISDMWSAEERGKAMGVYTLGPLLGPVIGPIAGGFIAEYSTWRWVFWATSAAAVAVQVV GVFWLRECHPGTILRRRRDVLAKETGNEELHTAEKVETLGFKLLHAFERPVRMFTTQPIVFCIALYMAYLFGVTY MMFATFPDIWTDVYHESSGIGGLNYLSIAIGAFIGLFFNLKLVDRIYRTLKARNNNIGKPEFRMPSLAVGSIIST IGLFWYGWSIGNTHWIMPNIGALIYTMGTISCLQGMQTYIVDSYQTYAASAMAACAVLRSLCGFGFPLFAPYMYN ALGYGWGTSVLAFTAMIFGWGGPFVFWKYGPRLRAMSEYASG* |
| Coding | >Ani_SJS72_1|g8170.t1 ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCACCCCCAACCCTCCCATCAAGGCCGAA GCCTCCAAAGATCCCAACCTCGTCACCTGGAACAGCCCTAATGACCCAGGAAATCCCAAGAATTGGCCGAGAGGC CTAAAGTGGCAGAATACGTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGCCCCG GCCATGAATGATCTCGCGCAGTCGCTGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCAACTC AGCAATGTGTGGTATCTGGCCTGGAATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGGACTATTAGTGATATGTGGTCCGCGGAA GAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGGCGGG TTCATTGCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGTAGTT GGGGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGAGGAGACGAGACGTTCTTGCTAAGGAAACA GGAAATGAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCGGCCG GTGCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTTATATGGCCTATCTCTTCGGCGTGACGTAC ATGATGTTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAATTAT CTCTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCAAGCTCGTGGACCGTATCTACAGGACTCTC AAAGCCCGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAGTACT ATCGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGATTTAC ACCATGGGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGCTAGC GCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTATAAC GCCCTGGGGTATGGTTGGGGCACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTTTGTT TTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCTCTGGTTGA |
| Transcript | >Ani_SJS72_1|g8170.t1 ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCACCCCCAACCCTCCCATCAAGGCCGAA GCCTCCAAAGATCCCAACCTCGTCACCTGGAACAGCCCTAATGACCCAGGAAATCCCAAGAATTGGCCGAGAGGC CTAAAGTGGCAGAATACGTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGCCCCG GCCATGAATGATCTCGCGCAGTCGCTGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCAACTC AGCAATGTGTGGTATCTGGCCTGGAATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGGACTATTAGTGATATGTGGTCCGCGGAA GAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGGCGGG TTCATTGCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGTAGTT GGGGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGAGGAGACGAGACGTTCTTGCTAAGGAAACA GGAAATGAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCGGCCG GTGCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTTATATGGCCTATCTCTTCGGCGTGACGTAC ATGATGTTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAATTAT CTCTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCAAGCTCGTGGACCGTATCTACAGGACTCTC AAAGCCCGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAGTACT ATCGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGATTTAC ACCATGGGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGCTAGC GCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTATAAC GCCCTGGGGTATGGTTGGGGCACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTTTGTT TTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCTCTGGTTGA |
| Gene | >Ani_SJS72_1|g8170.t1 ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCACCCCCAACCCTCCCATCAAGGCCGAA GCCTCCAAAGATCCCAACCTCGTCACCTGGAACAGCCCTAATGACCCAGGAAATCCCAAGAATTGGCCGAGAGGC CTAAAGTGGCAGAATACGTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGCCCCG GCCATGAATGATCTCGCGCAGTCGCTGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCAACTC AGCAATGTGTGGTATCTGGCCTGGAATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGGACTATTAGGTGAGTGAATTATATTCAA AGATGGATTTGAATATATATTTTCAATCGGCATTTGCACTCCACTGACTTCAACTGGTAGTGATATGTGGTCCGC GGAAGAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGG CGGGTTCATTGCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGT AGTTGGGGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGAGGAGACGAGACGTTCTTGCTAAGGA AACAGGAAATGAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCG GCCGGTGCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTTATATGGCCTATCTCTTCGGCGTGAC GTACATGATGTTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAA TTATCTCTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCAAGCTCGTGGACCGTATCTACAGGAC TCTCAAAGCCCGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAG TACTATCGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGAT TTACACCATGGGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGC TAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTA TAACGCCCTGGGGTATGGTTGGGGCACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTT TGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCTCTGGTTGA |