Protein ID | Ani_SJS72_1|g812.t1 |
Gene name | |
Location | scaffold_004:31232..32707 |
Strand | - |
Gene length (bp) | 1475 |
Transcript length (bp) | 1272 |
Coding sequence length (bp) | 1272 |
Protein length (aa) | 424 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06728 | PIG-U | GPI transamidase subunit PIG-U | 3.6E-125 | 14 | 388 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 35 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 133 | 155 | 22 |
2 | 180 | 202 | 22 |
3 | 223 | 245 | 22 |
4 | 278 | 300 | 22 |
5 | 307 | 326 | 19 |
6 | 350 | 372 | 22 |
7 | 379 | 401 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g812.t1 MGVDHRKAAVFGGALALRLLLSVLFPSLPDLLTGRVEVSTPVTSFKRLQEGLFLYMRNVSPYDGGVFHQAPLLLP LFSLLPNAQSHPIPTAVFYSLVDLVNANALVTISDSGQAVSGRFYSALRKHIRWDGVSIAAWFLFNPFTIATCLG RSTGVFTTTGILYSFSSAVTGNSLNAMLSLGLASYLSIYPALLFIPLVLLCYDQRVQKAKVSSGALPFALQHFAV FLTCIAGLLGISTLLIGDFYSFISATYGVQLLVPDLTPNVGLWWYFFIEIFDSFREFFLGVFWLHLAAYMGGLTV RLRRQPLFVLTSLLGIFAIFKPYPSISDASLYFALLPLYRHLFPLMRYTFFAISALLYATLLGPAFYHLWIYAGS GNANFFYAITLVWSLGLSILLADTIFAALRDEWEYDNPELRGKEVRQV* |
Coding | >Ani_SJS72_1|g812.t1 ATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTC CCCTCACTCCCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAA GGTCTTTTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCT CTATTTTCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTG AATGCGAATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAG CATATTAGATGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGC CGATCGACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAAT GCAATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTA TGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTT TTCCTTACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCG ACATATGGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATC TTCGACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCACTTGGCTGCGTACATGGGTGGCCTTACTGTG CGACTGCGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGC ATTTCCGACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTT TTCGCAATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCC GGTAACGCCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATC TTCGCCGCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAA |
Transcript | >Ani_SJS72_1|g812.t1 ATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTC CCCTCACTCCCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACTTCAAGAA GGTCTTTTCCTGTACATGCGCAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCAGGCACCGCTACTTCTTCCT CTATTTTCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTGCGGTATTCTACTCGCTGGTAGACCTGGTG AATGCGAATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTATCGGGGAGATTCTATTCGGCATTGCGGAAG CATATTAGATGGGATGGAGTGTCTATCGCGGCATGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTTGGGC CGATCGACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCTGAAT GCAATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCTTCTA TGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGCAGTT TTCCTTACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTCTGCG ACATATGGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGAAATC TTCGACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCACTTGGCTGCGTACATGGGTGGCCTTACTGTG CGACTGCGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCCCAGC ATTTCCGACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCCTCTGATGCGATACACCTTT TTCGCAATCTCCGCCCTTCTCTACGCCACTCTCCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCC GGTAACGCCAACTTCTTCTACGCCATCACTCTGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATC TTCGCCGCCCTCCGCGACGAATGGGAATACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAA |
Gene | >Ani_SJS72_1|g812.t1 ATGGGGGTAGATCATAGGAAAGCCGCCGTGTTCGGTGGTGCTCTGGCCCTGCGACTTCTTCTCTCAGTATTGTTC CCCTCACTCCCCGACTTGTTGACGGGTAGAGTCGAGGTATCAACACCGGTGACCAGCTTCAAAAGACGTGAGTCA GAGCTAACAGGCTTGAAATTACTGGAGACTAATGATCGTCTTTATAGTTCAAGAAGGTCTTTTCCTGTACATGCG CAATGTTTCCCCCTATGACGGAGGCGTCTTCCACCAGGTATAGCCGACGACTATACATCCGAGTGAACACTCCTA ACAAAGCACAGGCACCGCTACTTCTTCCTCTATTTTCCCTCCTACCGAACGCACAATCTCATCCTATTCCCACTG CGGTATTCTACTCGCTGGTAGACCTGGTGAATGCGAATGCTCTGGTTACGATCTCGGATTCGGGGCAGGCGGTAT CGGGGAGATTCTATTCGGCATTGCGGAAGCATATTAGATGGGATGGAGTGTCTATCGCGGCATGGTAAAGGGCGG ATATCTATACTCGGTGTTTCTTGGTGCTGACCTTGTCAGGTTTCTATTCAATCCCTTCACCATCGCAACCTGCTT GGGCCGATCGACTGGGGTATTTACTACAACCGGAATCCTATACTCCTTTTCAAGCGCTGTCACTGGAAACAGTCT GAATGCAATGCTGTCTCTGGGGCTTGCATCGTACCTGTCGATATATCCCGCACTTCTCTTCATTCCGCTTGTTCT TCTATGCTACGACCAGCGAGTCCAGAAAGCCAAGGTTTCCTCCGGCGCCCTACCGTTCGCTCTACAACACTTCGC AGTTTTCCTTACATGCATTGCAGGACTGCTTGGCATATCTACTCTGTTGATTGGCGACTTTTATAGCTTCATCTC TGCGACATATGGTGTCCAGTTGCTCGTGCCTGACCTGACCCCCAACGTTGGCCTTTGGTGGTATTTCTTCATCGA AATCTTCGACTCTTTTCGCGAGTTCTTCCTAGGGGTGTTCTGGCTTCACTTGGCTGCGTACATGGGTGGCCTTAC TGTGCGACTGCGCCGACAGCCTTTGTTTGTGCTGACGTCCCTTCTGGGCATCTTTGCCATATTCAAGCCATATCC CAGCATTTCCGACGCCTCACTATATTTCGCCCTGCTTCCACTCTACCGCCACCTCTTCCCTCGTAAGCACACTTC CGACTGTATCTATTGACATGTGCTAATAGTATTTAGTGATGCGATACACCTTTTTCGCAATCTCCGCCCTTCTCT ACGCCACTCTCCTAGGGCCCGCCTTCTATCATCTCTGGATATACGCCGGCTCCGGTAACGCCAACTTCTTCTACG CCATCACTCTGGTATGGAGTCTTGGCCTATCAATATTACTAGCGGACACCATCTTCGCCGCCCTCCGCGACGAAT GGGAATACGACAACCCAGAGTTGCGCGGCAAAGAAGTGCGACAAGTTTAA |