Protein ID | Ani_SJS72_1|g8115.t1 |
Gene name | |
Location | scaffold_072:51306..52533 |
Strand | - |
Gene length (bp) | 1227 |
Transcript length (bp) | 1227 |
Coding sequence length (bp) | 1227 |
Protein length (aa) | 409 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 2.0E-39 | 21 | 285 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.5 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8115.t1 MAHDPLHLDHVNWYHDQVVFLTGATGNLGGCILYKLAVQLPTKKIYVLCRRSFEQAMDKWEASMPEQVEEIFDSG KVHCLIGDTTEPNLGLKKADRDRLQQEVTVVIHGAASISMFQELHEAVQQHCSPMANMIHLASQLAHLQTFVYIS SISVCMLLSDGTAKEQFVKASADEPDPEEQVASIMATHSSPYSDRFPTSYSQAKYLAERLLFSQEGSLPILVVRP ASIGPAIRDPYPLYGVPGSTPVDTAVHLFTQSGVYRSMSEIKKFSEETVVDEIPVDLTANGCLLHIACGSRGIVH LGCQLYITRSLSDLTIQWQKYGPKDLELRMARLNKERNGALARQAYEAMYRSHRVWFFDCSRSQPLQGTEGPIGL SLANHDFEQYARARVEKQGRIWTQQMKVWDSQC* |
Coding | >Ani_SJS72_1|g8115.t1 ATGGCTCACGACCCCCTCCATCTTGACCATGTTAACTGGTATCACGACCAAGTGGTTTTCCTAACCGGAGCCACT GGCAATCTCGGAGGATGTATCTTATATAAATTAGCCGTGCAGCTGCCCACGAAGAAGATCTACGTACTGTGTCGC CGCTCCTTCGAGCAGGCCATGGACAAATGGGAGGCATCGATGCCGGAACAGGTGGAAGAAATCTTCGACTCCGGC AAGGTTCACTGTCTCATCGGTGACACCACCGAGCCCAATCTGGGACTGAAGAAGGCCGATCGGGACAGACTGCAA CAAGAAGTCACAGTCGTCATCCACGGTGCCGCTTCTATATCCATGTTCCAGGAGCTCCACGAGGCGGTCCAACAG CATTGTTCGCCAATGGCGAACATGATCCATCTCGCATCCCAATTAGCACACCTGCAGACTTTCGTGTACATATCA TCCATCTCAGTCTGCATGCTACTTTCGGATGGAACTGCTAAGGAACAATTCGTGAAGGCATCGGCGGACGAGCCC GACCCCGAAGAACAGGTGGCTTCTATCATGGCAACTCACTCGTCGCCGTATTCCGACCGATTCCCGACCTCCTAC AGTCAGGCCAAGTATCTCGCGGAGAGGTTACTTTTTTCCCAGGAAGGTTCCCTTCCCATCCTGGTGGTCCGACCA GCGAGCATTGGGCCTGCTATTCGAGACCCATATCCGCTATATGGTGTCCCCGGTTCCACCCCGGTTGATACCGCT GTTCATCTCTTTACACAGAGTGGAGTATACCGATCAATGAGCGAGATAAAAAAGTTTTCAGAAGAGACAGTAGTC GATGAAATCCCAGTGGACCTGACCGCTAACGGATGTCTCCTTCACATTGCCTGCGGGAGCCGTGGCATTGTCCAT CTCGGATGCCAGCTGTACATCACTCGAAGTCTGAGTGATTTGACGATCCAATGGCAGAAGTATGGTCCGAAAGAT CTGGAGCTTCGCATGGCCAGGCTGAATAAAGAACGGAATGGTGCTTTAGCGAGACAGGCCTACGAGGCAATGTAT CGCAGTCACCGTGTTTGGTTCTTTGACTGCTCTCGCTCGCAACCCCTCCAAGGCACCGAGGGGCCCATCGGCCTG TCGCTTGCCAATCATGACTTTGAGCAGTATGCAAGAGCGCGGGTGGAAAAGCAGGGGCGGATATGGACACAGCAG ATGAAGGTATGGGATTCGCAGTGTTGA |
Transcript | >Ani_SJS72_1|g8115.t1 ATGGCTCACGACCCCCTCCATCTTGACCATGTTAACTGGTATCACGACCAAGTGGTTTTCCTAACCGGAGCCACT GGCAATCTCGGAGGATGTATCTTATATAAATTAGCCGTGCAGCTGCCCACGAAGAAGATCTACGTACTGTGTCGC CGCTCCTTCGAGCAGGCCATGGACAAATGGGAGGCATCGATGCCGGAACAGGTGGAAGAAATCTTCGACTCCGGC AAGGTTCACTGTCTCATCGGTGACACCACCGAGCCCAATCTGGGACTGAAGAAGGCCGATCGGGACAGACTGCAA CAAGAAGTCACAGTCGTCATCCACGGTGCCGCTTCTATATCCATGTTCCAGGAGCTCCACGAGGCGGTCCAACAG CATTGTTCGCCAATGGCGAACATGATCCATCTCGCATCCCAATTAGCACACCTGCAGACTTTCGTGTACATATCA TCCATCTCAGTCTGCATGCTACTTTCGGATGGAACTGCTAAGGAACAATTCGTGAAGGCATCGGCGGACGAGCCC GACCCCGAAGAACAGGTGGCTTCTATCATGGCAACTCACTCGTCGCCGTATTCCGACCGATTCCCGACCTCCTAC AGTCAGGCCAAGTATCTCGCGGAGAGGTTACTTTTTTCCCAGGAAGGTTCCCTTCCCATCCTGGTGGTCCGACCA GCGAGCATTGGGCCTGCTATTCGAGACCCATATCCGCTATATGGTGTCCCCGGTTCCACCCCGGTTGATACCGCT GTTCATCTCTTTACACAGAGTGGAGTATACCGATCAATGAGCGAGATAAAAAAGTTTTCAGAAGAGACAGTAGTC GATGAAATCCCAGTGGACCTGACCGCTAACGGATGTCTCCTTCACATTGCCTGCGGGAGCCGTGGCATTGTCCAT CTCGGATGCCAGCTGTACATCACTCGAAGTCTGAGTGATTTGACGATCCAATGGCAGAAGTATGGTCCGAAAGAT CTGGAGCTTCGCATGGCCAGGCTGAATAAAGAACGGAATGGTGCTTTAGCGAGACAGGCCTACGAGGCAATGTAT CGCAGTCACCGTGTTTGGTTCTTTGACTGCTCTCGCTCGCAACCCCTCCAAGGCACCGAGGGGCCCATCGGCCTG TCGCTTGCCAATCATGACTTTGAGCAGTATGCAAGAGCGCGGGTGGAAAAGCAGGGGCGGATATGGACACAGCAG ATGAAGGTATGGGATTCGCAGTGTTGA |
Gene | >Ani_SJS72_1|g8115.t1 ATGGCTCACGACCCCCTCCATCTTGACCATGTTAACTGGTATCACGACCAAGTGGTTTTCCTAACCGGAGCCACT GGCAATCTCGGAGGATGTATCTTATATAAATTAGCCGTGCAGCTGCCCACGAAGAAGATCTACGTACTGTGTCGC CGCTCCTTCGAGCAGGCCATGGACAAATGGGAGGCATCGATGCCGGAACAGGTGGAAGAAATCTTCGACTCCGGC AAGGTTCACTGTCTCATCGGTGACACCACCGAGCCCAATCTGGGACTGAAGAAGGCCGATCGGGACAGACTGCAA CAAGAAGTCACAGTCGTCATCCACGGTGCCGCTTCTATATCCATGTTCCAGGAGCTCCACGAGGCGGTCCAACAG CATTGTTCGCCAATGGCGAACATGATCCATCTCGCATCCCAATTAGCACACCTGCAGACTTTCGTGTACATATCA TCCATCTCAGTCTGCATGCTACTTTCGGATGGAACTGCTAAGGAACAATTCGTGAAGGCATCGGCGGACGAGCCC GACCCCGAAGAACAGGTGGCTTCTATCATGGCAACTCACTCGTCGCCGTATTCCGACCGATTCCCGACCTCCTAC AGTCAGGCCAAGTATCTCGCGGAGAGGTTACTTTTTTCCCAGGAAGGTTCCCTTCCCATCCTGGTGGTCCGACCA GCGAGCATTGGGCCTGCTATTCGAGACCCATATCCGCTATATGGTGTCCCCGGTTCCACCCCGGTTGATACCGCT GTTCATCTCTTTACACAGAGTGGAGTATACCGATCAATGAGCGAGATAAAAAAGTTTTCAGAAGAGACAGTAGTC GATGAAATCCCAGTGGACCTGACCGCTAACGGATGTCTCCTTCACATTGCCTGCGGGAGCCGTGGCATTGTCCAT CTCGGATGCCAGCTGTACATCACTCGAAGTCTGAGTGATTTGACGATCCAATGGCAGAAGTATGGTCCGAAAGAT CTGGAGCTTCGCATGGCCAGGCTGAATAAAGAACGGAATGGTGCTTTAGCGAGACAGGCCTACGAGGCAATGTAT CGCAGTCACCGTGTTTGGTTCTTTGACTGCTCTCGCTCGCAACCCCTCCAAGGCACCGAGGGGCCCATCGGCCTG TCGCTTGCCAATCATGACTTTGAGCAGTATGCAAGAGCGCGGGTGGAAAAGCAGGGGCGGATATGGACACAGCAG ATGAAGGTATGGGATTCGCAGTGTTGA |