© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g8103.t1 |
| Gene name | |
| Location | scaffold_072:19641..21504 |
| Strand | - |
| Gene length (bp) | 1863 |
| Transcript length (bp) | 1620 |
| Coding sequence length (bp) | 1620 |
| Protein length (aa) | 540 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 4.8E-63 | 48 | 492 |
| PF00324 | AA_permease | Amino acid permease | 1.2E-17 | 65 | 504 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 70 | 22 |
| 2 | 83 | 105 | 22 |
| 3 | 177 | 199 | 22 |
| 4 | 206 | 225 | 19 |
| 5 | 240 | 262 | 22 |
| 6 | 282 | 304 | 22 |
| 7 | 337 | 359 | 22 |
| 8 | 388 | 410 | 22 |
| 9 | 414 | 436 | 22 |
| 10 | 449 | 471 | 22 |
| 11 | 481 | 503 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g8103.t1 MADIKAPANPAMETDGAELEKVRIAGTNQADTQLAAEFGYKPVFKREFGYLSTFSFAVSISGLFATIMTTMSYPL EAGGSSAVVWCWLVSGAGCMCIALSVAELVSAYPTSGGLYFTISRLAPHDWVPSISWVTGWLNFLGQICGVASSE YGGAQMLLAIVSMCKGMDNYEIKTTTTVGVMAGLTVITGLVNSLSTYWMEKMTKFYVIFHVFILVACAIALLVMT DDKHDASYVFTHVESTTGWKPIGFSWLFGFLSVSWTMTDYDATAHITEEISNPEIKAPWAISMAMLFTYLAGFLF NIVLCFCMGDPNAILNSKMEQPVAQIFYNSLGKGGAIFFTISALLIIKFVTFTAMQSLGRTVFAFSRDRMLPFSN VWVKVSPITGTPLYAVWISVFFCIAINLIALGSYTAVDAVFTLCSIALDWSYCIPVLCKLLFGQFKPGPWHMGIF STVINAWACLWTLFVSIIFVLPTDRPVTPDNMNYACVFLVFVLLFALVYWFISGKRFYHGPITEAVVADSASESN LPGDAKSDKDGQEN* |
| Coding | >Ani_SJS72_1|g8103.t1 ATGGCAGACATCAAAGCACCCGCAAATCCAGCCATGGAGACTGACGGTGCCGAACTCGAGAAGGTCCGCATCGCC GGTACGAATCAGGCCGACACCCAACTCGCCGCAGAATTTGGTTACAAGCCCGTCTTCAAGCGAGAGTTCGGTTAC CTCTCCACCTTTTCGTTCGCAGTCAGTATCAGTGGTTTGTTTGCAACCATCATGACCACCATGTCCTATCCTCTC GAGGCGGGAGGAAGCAGCGCGGTGGTATGGTGTTGGCTTGTTTCGGGAGCCGGGTGCATGTGTATCGCGCTTTCG GTTGCTGAGCTTGTATCTGCCTATCCGACCTCTGGAGGCCTGTATTTCACGATCTCTAGACTTGCTCCACATGAT TGGGTCCCATCGATCAGTTGGGTGACTGGTTGGTTAAACTTCCTTGGCCAAATTTGTGGTGTTGCCTCATCCGAG TATGGTGGTGCGCAAATGCTCCTGGCCATTGTCTCGATGTGCAAGGGAATGGACAATTACGAAATCAAAACCACC ACTACCGTTGGTGTGATGGCTGGTTTGACTGTCATCACCGGTCTGGTTAACTCTCTGTCTACATACTGGATGGAA AAGATGACCAAGTTCTATGTCATCTTTCACGTCTTCATCCTCGTCGCTTGTGCGATTGCTCTTCTTGTCATGACA GACGATAAGCACGATGCCTCGTACGTCTTCACCCATGTCGAATCGACCACTGGTTGGAAGCCTATCGGTTTCAGT TGGCTGTTTGGCTTCCTGTCTGTCAGCTGGACCATGACGGACTATGATGCCACGGCCCATATCACCGAGGAGATC AGTAACCCTGAGATCAAGGCGCCTTGGGCAATTTCGATGGCTATGTTGTTCACTTATCTGGCTGGCTTCCTGTTC AACATCGTTCTGTGCTTCTGCATGGGTGACCCGAACGCCATTCTCAACTCCAAGATGGAGCAGCCAGTCGCACAG ATCTTCTATAACAGCCTTGGCAAGGGTGGTGCCATCTTCTTCACCATTTCTGCTCTGCTCATTATCAAGTTTGTC ACCTTCACAGCCATGCAGTCGCTTGGCCGAACTGTGTTTGCCTTTTCACGTGACCGCATGCTTCCCTTTTCCAAC GTCTGGGTCAAGGTATCTCCCATCACCGGGACTCCCCTCTATGCGGTCTGGATCTCCGTGTTCTTCTGCATTGCG ATCAATCTTATCGCTCTGGGATCCTACACGGCAGTTGATGCCGTTTTCACCCTCTGCTCCATCGCTCTTGACTGG AGTTATTGCATTCCCGTTCTGTGCAAATTGCTGTTTGGCCAATTCAAACCCGGACCTTGGCACATGGGCATCTTT AGCACGGTCATAAATGCCTGGGCCTGTCTTTGGACGCTATTCGTCAGCATTATTTTCGTTCTGCCCACGGACCGT CCCGTGACCCCTGACAACATGAACTATGCCTGTGTGTTCCTGGTGTTTGTCTTGCTGTTTGCGCTGGTTTACTGG TTCATCAGCGGCAAGCGCTTCTACCATGGCCCCATTACCGAAGCAGTTGTAGCAGATTCAGCCTCCGAAAGCAAC CTACCCGGTGACGCCAAATCGGATAAGGACGGACAAGAGAACTGA |
| Transcript | >Ani_SJS72_1|g8103.t1 ATGGCAGACATCAAAGCACCCGCAAATCCAGCCATGGAGACTGACGGTGCCGAACTCGAGAAGGTCCGCATCGCC GGTACGAATCAGGCCGACACCCAACTCGCCGCAGAATTTGGTTACAAGCCCGTCTTCAAGCGAGAGTTCGGTTAC CTCTCCACCTTTTCGTTCGCAGTCAGTATCAGTGGTTTGTTTGCAACCATCATGACCACCATGTCCTATCCTCTC GAGGCGGGAGGAAGCAGCGCGGTGGTATGGTGTTGGCTTGTTTCGGGAGCCGGGTGCATGTGTATCGCGCTTTCG GTTGCTGAGCTTGTATCTGCCTATCCGACCTCTGGAGGCCTGTATTTCACGATCTCTAGACTTGCTCCACATGAT TGGGTCCCATCGATCAGTTGGGTGACTGGTTGGTTAAACTTCCTTGGCCAAATTTGTGGTGTTGCCTCATCCGAG TATGGTGGTGCGCAAATGCTCCTGGCCATTGTCTCGATGTGCAAGGGAATGGACAATTACGAAATCAAAACCACC ACTACCGTTGGTGTGATGGCTGGTTTGACTGTCATCACCGGTCTGGTTAACTCTCTGTCTACATACTGGATGGAA AAGATGACCAAGTTCTATGTCATCTTTCACGTCTTCATCCTCGTCGCTTGTGCGATTGCTCTTCTTGTCATGACA GACGATAAGCACGATGCCTCGTACGTCTTCACCCATGTCGAATCGACCACTGGTTGGAAGCCTATCGGTTTCAGT TGGCTGTTTGGCTTCCTGTCTGTCAGCTGGACCATGACGGACTATGATGCCACGGCCCATATCACCGAGGAGATC AGTAACCCTGAGATCAAGGCGCCTTGGGCAATTTCGATGGCTATGTTGTTCACTTATCTGGCTGGCTTCCTGTTC AACATCGTTCTGTGCTTCTGCATGGGTGACCCGAACGCCATTCTCAACTCCAAGATGGAGCAGCCAGTCGCACAG ATCTTCTATAACAGCCTTGGCAAGGGTGGTGCCATCTTCTTCACCATTTCTGCTCTGCTCATTATCAAGTTTGTC ACCTTCACAGCCATGCAGTCGCTTGGCCGAACTGTGTTTGCCTTTTCACGTGACCGCATGCTTCCCTTTTCCAAC GTCTGGGTCAAGGTATCTCCCATCACCGGGACTCCCCTCTATGCGGTCTGGATCTCCGTGTTCTTCTGCATTGCG ATCAATCTTATCGCTCTGGGATCCTACACGGCAGTTGATGCCGTTTTCACCCTCTGCTCCATCGCTCTTGACTGG AGTTATTGCATTCCCGTTCTGTGCAAATTGCTGTTTGGCCAATTCAAACCCGGACCTTGGCACATGGGCATCTTT AGCACGGTCATAAATGCCTGGGCCTGTCTTTGGACGCTATTCGTCAGCATTATTTTCGTTCTGCCCACGGACCGT CCCGTGACCCCTGACAACATGAACTATGCCTGTGTGTTCCTGGTGTTTGTCTTGCTGTTTGCGCTGGTTTACTGG TTCATCAGCGGCAAGCGCTTCTACCATGGCCCCATTACCGAAGCAGTTGTAGCAGATTCAGCCTCCGAAAGCAAC CTACCCGGTGACGCCAAATCGGATAAGGACGGACAAGAGAACTGA |
| Gene | >Ani_SJS72_1|g8103.t1 ATGGCAGACATCAAAGCACCCGCAAATCCAGCCATGGAGACTGACGGTGCCGAACTCGAGAAGGTCCGCATCGCC GGTACGAATCAGGCCGACACCCAACTCGCCGCAGAATTTGGTTACAAGCCCGTCTTCAAGCGAGAGTTCGGTTAC CTCTCCACCTTTTCGTTCGCAGTCAGTATCAGTGGTTTGTTTGCAACCATCATGACCACCATGTCCTATCCTCTC GAGGCGGGAGGAAGCAGCGCGGTGGTATGGTGTTGGCTTGTTTCGGGAGCCGGGTGCATGTGTATCGCGGTAGGT AATCCGATATAACAATGCGCTGTGCGGCGTGGGTACAGAGGCTGATCAAACCCGCTGCAGCTTTCGGTTGCTGAG CTTGTATCTGCCTATCCGACCTCTGGAGGCCTGTAAGTGTCACCGTTCGCTCGGAACGACAGCCGCTGACCCTAA GCGACAGGTATTTCACGATCTCTAGACTTGCTCCACATGATTGGGTCCCATCGATCAGTTGGTATGGAAACCTTG ATGTTCCAAGACAATTATTTTGTCTCAGAGAATGAATGTTGATACTCTTTAGGGTGACTGGTTGGTTAAACTTCC TTGGCCAAATTTGTGGTGTTGCCTCATCCGAGTATGGTGGTGCGCAAATGCTCCTGGCCATTGTCTCGATGTGCA AGGGAATGGACAATTACGAAATCAAAACCACCACTACCGTTGGTGTGATGGCTGGTTTGACTGTCATCACCGGTC TGGTTAACTCTCTGTCTACATACTGGATGGAAAAGATGACCAAGTTCTATGTCATCTTTCACGTCTTCATCCTCG TCGCTTGTGCGATTGCTCTTCTTGTCATGACAGACGATAAGCACGATGCCTCGTACGTCTTCACCCATGTCGAAT CGACCACTGGTTGGAAGCCTATCGGTTTCAGTTGGCTGTTTGGCTTCCTGTCTGTCAGCTGGACCATGACGGACT ATGATGCCACGGCCCATATCACCGAGGAGATCAGTAACCCTGAGATCAAGGCGCCTTGGGCAATTTCGATGGCTA TGTTGTTCACTTATCTGGCTGGCTTCCTGTTCAACATCGTTCTGTGCTTCTGCATGGGTGACCCGAACGCCATTC TCAACTCCAAGATGGAGCAGCCAGTCGCACAGATCTTCTATAACAGCCTTGGCAAGGGTGGTGCCATCTTCTTCA CCATTTCTGCTCTGCTCATTATCAAGTTTGTCACCTTCACAGCCATGCAGTCGCTTGGCCGAACTGTGTTTGCCT TTTCACGTGACCGCATGCTTCCCTTTTCCAACGTCTGGGTCAAGGTATCTCCCATCACCGGGACTCCCCTCTATG CGGTCTGGATCTCCGTGTTCTTCTGCATTGCGATCAATCTTATCGCTCTGGGATCCTACACGGCAGTTGATGCCG TTTTCACCCTCTGCTCCATCGCTCTTGACTGGAGTTATTGCATTCCCGTTCTGTGCAAATTGCTGTTTGGCCAAT TCAAACCCGGACCTTGGCACATGGGCATCTTTAGCACGGTCATAAATGCCTGGGCCTGTCTTTGGACGCTATTCG TCAGCATTATTTTCGTTCTGCCCACGGACCGTCCCGTGACCCCTGACAACGTAAGTGGAATTGATTGCATACCCG TGCTCTCTTTGGGCTGACCAAATCACCCTCCCTCAGATGAACTATGCCTGTGTGTTCCTGGTGTTTGTCTTGCTG TTTGCGCTGGTTTACTGGTTCATCAGCGGCAAGCGCTTCTACCATGGCCCCATTACCGAAGCAGTTGTAGCAGAT TCAGCCTCCGAAAGCAACCTACCCGGTGACGCCAAATCGGATAAGGACGGACAAGAGAACTGA |