Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g8070.t1
Gene name
Location	scaffold_071:102225..103115
Strand	-
Gene length (bp)	890
Transcript length (bp)	705
Coding sequence length (bp)	705
Protein length (aa)	235

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	48	70	22
3	85	107	22
4	114	133	19
5	186	208	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g8070.t1 MSSGLGISEFLGAGNAVISASLNTLGIEIWDPSLKAFCSFNGLMVQTFVVQVLLADYWILSIAICTYLILMDYAH AASWVQSHRAAIWCMAWGLSILWAVLGLVVVGYGDRVRLFVNFIPRWTIILVIMGIYTRLCLLLYRSHKAISSDH ELTLQTPHPHQWQLLDISDGPSQSTHSSIPLRKVSLQMMVYPTVYALVWIIPTSVRVYQGMTGKRAPLALEILEK VIETSHGLP*
Coding	>Ani_SJS72_1\|g8070.t1 ATGAGTTCAGGTCTTGGAATAAGCGAATTTCTAGGCGCAGGCAATGCTGTCATTTCGGCTAGTCTGAATACCTTG GGCATTGAGATATGGGATCCATCCCTCAAGGCATTCTGCAGCTTCAATGGACTCATGGTTCAGACTTTTGTGGTG CAGGTACTGCTAGCCGACTACTGGATCCTTTCGATTGCAATCTGCACGTACCTCATACTGATGGACTATGCCCAT GCTGCCTCGTGGGTCCAGAGCCACAGAGCCGCCATCTGGTGCATGGCATGGGGACTCTCGATCCTATGGGCAGTG CTTGGCCTTGTCGTCGTCGGATACGGTGATCGTGTCCGCCTTTTTGTGAACTTCATCCCACGATGGACTATCATC CTTGTCATCATGGGTATCTACACCCGACTATGCCTTCTCCTCTACCGGTCACATAAGGCCATCTCCAGCGACCAC GAACTTACTCTACAGACGCCGCATCCGCACCAATGGCAGCTTCTGGATATTAGTGATGGGCCTAGCCAAAGTACT CATTCGTCGATCCCGCTGAGGAAGGTATCACTTCAGATGATGGTATATCCGACCGTCTATGCACTGGTTTGGATC ATCCCCACTTCCGTGCGCGTCTATCAAGGGATGACGGGAAAGCGAGCTCCACTGGCATTGGAGATTCTAGAAAAG GTGATCGAAACAAGTCACGGCCTCCCATAA
Transcript	>Ani_SJS72_1\|g8070.t1 ATGAGTTCAGGTCTTGGAATAAGCGAATTTCTAGGCGCAGGCAATGCTGTCATTTCGGCTAGTCTGAATACCTTG GGCATTGAGATATGGGATCCATCCCTCAAGGCATTCTGCAGCTTCAATGGACTCATGGTTCAGACTTTTGTGGTG CAGGTACTGCTAGCCGACTACTGGATCCTTTCGATTGCAATCTGCACGTACCTCATACTGATGGACTATGCCCAT GCTGCCTCGTGGGTCCAGAGCCACAGAGCCGCCATCTGGTGCATGGCATGGGGACTCTCGATCCTATGGGCAGTG CTTGGCCTTGTCGTCGTCGGATACGGTGATCGTGTCCGCCTTTTTGTGAACTTCATCCCACGATGGACTATCATC CTTGTCATCATGGGTATCTACACCCGACTATGCCTTCTCCTCTACCGGTCACATAAGGCCATCTCCAGCGACCAC GAACTTACTCTACAGACGCCGCATCCGCACCAATGGCAGCTTCTGGATATTAGTGATGGGCCTAGCCAAAGTACT CATTCGTCGATCCCGCTGAGGAAGGTATCACTTCAGATGATGGTATATCCGACCGTCTATGCACTGGTTTGGATC ATCCCCACTTCCGTGCGCGTCTATCAAGGGATGACGGGAAAGCGAGCTCCACTGGCATTGGAGATTCTAGAAAAG GTGATCGAAACAAGTCACGGCCTCCCATAA
Gene	>Ani_SJS72_1\|g8070.t1 ATGAGTTCAGGTCTTGGAATAAGCGAATTTCTAGGCGCAGGCAATGCTGTCATTTCGGCTAGTCTGAATACCTTG GGCATTGAGATATGGGATCCATCCCTCAAGGCATTCTGCAGCTTCAATGGACTCATGGTTCAGACTTTTGTGGTG CAGGGTAAGGACCAATATATTGATTACTGACGGTACCATATTAACCGTTAGTACTGCTAGCCGACTACTGGATCC TTTCGATTGCAATCTGCACGTACCTCATACTGATGGACTATGCCCATGCTGCCTCGTGGGTCCAGAGCCACAGAG CCGCCATCTGGTGCATGGCATGGGGACTCTCGATCCTATGGGCAGTGCTTGGCCTTGTCGTCGTCGGATACGGGT ATGCCGGTGGCTGTATGTCCCCCTTTGGCTATATGGTCTTGAGACGCACGATTGATAGAGATCAGGGTGCTGGTT CACCAGTGATCGTGTCCGCCTTTTTGTGAACTTCATCCCACGATGGACTATCATCCTTGTCATCATGGGTATCTA CACCCGACTATGCCTTCTCCTCTACCGGTCACATAAGGCCATCTCCAGCGACCACGAACTTACTCTACAGACGCC GCATCCGCACCAATGGCAGCTTCTGGATATTAGTGATGGGCCTAGCCAAAGTACTCATTCGTCGATCCCGCTGAG GAAGGTTAGTCAATTTAGTATCAGAGTTTTCGGTCTCATCCTGATGACCGGATGACTAGGTATCACTTCAGATGA TGGTATATCCGACCGTCTATGCACTGGTTTGGATCATCCCCACTTCCGTGCGCGTCTATCAAGGGATGACGGGAA AGCGAGCTCCACTGGCATTGGAGATTCTAGAAAAGGTGATCGAAACAAGTCACGGCCTCCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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