Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g8063.t1
Gene name
Locationscaffold_071:81991..82258
Strand+
Gene length (bp)267
Transcript length (bp)267
Coding sequence length (bp)267
Protein length (aa) 89

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01607 CBM_14 Chitin binding Peritrophin-A domain 1.6E-09 25 76

GO

GO Term Description Terminal node
GO:0008061 chitin binding Yes
GO:0005576 extracellular region Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0097367 carbohydrate derivative binding No
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g8063.t1
MRFTYQALAVFISSLLVNSAAAHACESSAVWPDPADCHHFYQCNPGTEPAHKVCGAGTAFNPKISACDYEQNVPS
CFKDPHHPRPFHA*
Coding >Ani_SJS72_1|g8063.t1
ATGCGCTTCACCTACCAAGCTCTCGCTGTCTTCATCAGCTCCCTCCTCGTCAACAGCGCTGCGGCCCACGCCTGC
GAGAGCAGCGCTGTCTGGCCCGATCCCGCCGACTGCCACCATTTTTACCAGTGCAACCCGGGCACTGAGCCCGCC
CACAAGGTGTGCGGTGCTGGCACTGCCTTCAACCCCAAGATTAGCGCATGCGACTACGAGCAGAACGTTCCTTCT
TGCTTCAAGGACCCCCACCACCCTCGCCCTTTCCACGCCTAG
Transcript >Ani_SJS72_1|g8063.t1
ATGCGCTTCACCTACCAAGCTCTCGCTGTCTTCATCAGCTCCCTCCTCGTCAACAGCGCTGCGGCCCACGCCTGC
GAGAGCAGCGCTGTCTGGCCCGATCCCGCCGACTGCCACCATTTTTACCAGTGCAACCCGGGCACTGAGCCCGCC
CACAAGGTGTGCGGTGCTGGCACTGCCTTCAACCCCAAGATTAGCGCATGCGACTACGAGCAGAACGTTCCTTCT
TGCTTCAAGGACCCCCACCACCCTCGCCCTTTCCACGCCTAG
Gene >Ani_SJS72_1|g8063.t1
ATGCGCTTCACCTACCAAGCTCTCGCTGTCTTCATCAGCTCCCTCCTCGTCAACAGCGCTGCGGCCCACGCCTGC
GAGAGCAGCGCTGTCTGGCCCGATCCCGCCGACTGCCACCATTTTTACCAGTGCAACCCGGGCACTGAGCCCGCC
CACAAGGTGTGCGGTGCTGGCACTGCCTTCAACCCCAAGATTAGCGCATGCGACTACGAGCAGAACGTTCCTTCT
TGCTTCAAGGACCCCCACCACCCTCGCCCTTTCCACGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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