Protein ID | Ani_SJS72_1|g8052.t1 |
Gene name | |
Location | scaffold_071:29268..30726 |
Strand | - |
Gene length (bp) | 1458 |
Transcript length (bp) | 1395 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 1.9E-54 | 50 | 441 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 45 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 53 | 75 | 22 |
2 | 79 | 101 | 22 |
3 | 128 | 150 | 22 |
4 | 160 | 182 | 22 |
5 | 189 | 211 | 22 |
6 | 231 | 250 | 19 |
7 | 270 | 292 | 22 |
8 | 312 | 331 | 19 |
9 | 352 | 374 | 22 |
10 | 384 | 406 | 22 |
11 | 419 | 441 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g8052.t1 MGYGDEIAGMDNKSQNVMGGEKYDGDLVEKMSEGERNIYEAGIEKYNRLGWKRLTVVLIVEAIALGSLSIPGSFA TLGMVAGVILTVGLGFVAIYTSYVVGQVKLKFPDVAHYPEAGRLMFGRVGYEIVYVMLGLQLLFLTGSHCLTGTI AFINITESGVCSVVFAVVSAIILLLFAIPPSFAEMAILGYVDFVSIIAAILITMIATGITASDSTAGLSGVNWSA WPKEGITFTDAFIAVTNIVFAYSFAMCQFSFMDEMHTPKDYVKSIWALGLIEIVIYTLTGALIYAFVGQDVQSPA LLSAGSMVKRVAFGIALPVIFISGSINTVVLGRMIHGRIFKNSTIRFINTKMGWITWLALITVITWVAFVIAEVI PFFSDLLSISSSLFISGFTFYFPALMWFLLVREGKWNTPKNLMLGALNLCCLIIGLVTLGAGTYASVDDIILNYR NGSVRGVFTCAAPE* |
Coding | >Ani_SJS72_1|g8052.t1 ATGGGTTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGTCATGGGGGGTGAGAAGTACGATGGT GACTTGGTGGAGAAGATGAGCGAGGGCGAGCGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGA TGGAAGCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAGTTTGTCCATTCCCGGCAGTTTCGCT ACCCTTGGTATGGTTGCCGGTGTCATCTTGACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTC GGTCAGGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGGACGGCTGATGTTCGGTCGGGTTGGT TACGAGATTGTCTACGTGATGCTGGGTCTGCAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATC GCCTTCATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGTCGTCTCCGCCATCATCCTGCTGCTC TTCGCCATCCCTCCCAGTTTCGCTGAGATGGCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATC CTGATCACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGGTCTGTCCGGGGTGAACTGGTCCGCT TGGCCCAAGGAGGGCATCACCTTCACGGACGCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCC ATGTGCCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGTCAAATCCATCTGGGCGCTGGGTCTC ATTGAAATCGTCATCTACACGCTGACGGGTGCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCC TTGCTGTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCTGCCCGTCATCTTCATCAGTGGTTCG ATCAACACGGTGGTGCTGGGCCGCATGATCCATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACC AAGATGGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGTGGCATTTGTGATCGCCGAGGTCATT CCCTTCTTCTCGGATCTGCTGTCCATCTCCTCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTG ATGTGGTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCTGATGCTGGGGGCACTGAACCTGTGC TGCCTGATTATTGGTCTGGTGACGCTGGGGGCTGGTACCTATGCCAGTGTCGACGACATTATTCTCAACTACCGC AACGGTTCCGTGCGTGGTGTGTTCACCTGCGCTGCTCCGGAGTAG |
Transcript | >Ani_SJS72_1|g8052.t1 ATGGGTTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGTCATGGGGGGTGAGAAGTACGATGGT GACTTGGTGGAGAAGATGAGCGAGGGCGAGCGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGA TGGAAGCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAGTTTGTCCATTCCCGGCAGTTTCGCT ACCCTTGGTATGGTTGCCGGTGTCATCTTGACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTC GGTCAGGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGGACGGCTGATGTTCGGTCGGGTTGGT TACGAGATTGTCTACGTGATGCTGGGTCTGCAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATC GCCTTCATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGTCGTCTCCGCCATCATCCTGCTGCTC TTCGCCATCCCTCCCAGTTTCGCTGAGATGGCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATC CTGATCACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGGTCTGTCCGGGGTGAACTGGTCCGCT TGGCCCAAGGAGGGCATCACCTTCACGGACGCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCC ATGTGCCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGTCAAATCCATCTGGGCGCTGGGTCTC ATTGAAATCGTCATCTACACGCTGACGGGTGCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCC TTGCTGTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCTGCCCGTCATCTTCATCAGTGGTTCG ATCAACACGGTGGTGCTGGGCCGCATGATCCATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACC AAGATGGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGTGGCATTTGTGATCGCCGAGGTCATT CCCTTCTTCTCGGATCTGCTGTCCATCTCCTCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTG ATGTGGTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCTGATGCTGGGGGCACTGAACCTGTGC TGCCTGATTATTGGTCTGGTGACGCTGGGGGCTGGTACCTATGCCAGTGTCGACGACATTATTCTCAACTACCGC AACGGTTCCGTGCGTGGTGTGTTCACCTGCGCTGCTCCGGAGTAG |
Gene | >Ani_SJS72_1|g8052.t1 ATGGGTTACGGCGACGAAATCGCCGGCATGGACAACAAGTCCCAGAATGTCATGGGGGGTGAGAAGTACGATGGT GACTTGGTGGAGAAGATGAGCGAGGGCGAGCGGAACATCTACGAGGCCGGTATCGAAAAGTACAACCGTCTGGGA TGGAAGCGCCTGACGGTTGTGCTGATCGTCGAGGCCATTGCGCTGGGTAGTTTGTCCATTCCCGGCAGTTTCGCT ACCCTTGGTATGGTTGCCGGTGTCATCTTGACCGTGGGTCTGGGTTTTGTCGCCATCTACACCAGTTACGTGGTC GGTCAGGTCAAGCTGAAGTTCCCCGACGTCGCCCACTACCCCGAGGCGGGACGGCTGATGTTCGGTCGGGTTGGT TACGAGATTGTCTACGTGATGCTGGGTCTGCAATTGCTCTTCCTGACGGGCTCCCACTGCTTGACGGGTACCATC GCCTTCATTAACATTACCGAAAGCGGCGTCTGCTCCGTCGTGTTCGCCGTCGTCTCCGCCATCATCCTGCTGCTC TTCGCCATCCCTCCCAGTTTCGCTGAGATGGCTATTCTGGGCTACGTCGACTTTGTCTCCATCATCGCCGCTATC CTGATCACCATGATTGCCACGGGAATCACGGCTTCCGACAGCACGGCGGGTCTGTCCGGGGTGAACTGGTCCGCT TGGCCCAAGGAGGGCATCACCTTCACGGACGCCTTCATTGCCGTCACCAACATTGTCTTCGCCTACAGTTTCGCC ATGTGCCAGTTCTCGTTCATGGATGAGATGCACACCCCCAAGGACTACGTCAAATCCATCTGGGCGCTGGGTCTC ATTGAAATCGTCATCTACACGCTGACGGGTGCGCTGATCTACGCCTTTGTTGGTCAGGATGTGCAGAGCCCCGCC TTGCTGTCCGCCGGGAGCATGGTGAAGCGTGTGGCGTTTGGGATTGCGCTGCCCGTCATCTTCATCAGTGGTTCG ATCAACACGGTGGTGCTGGGCCGCATGATCCATGGGCGCATCTTCAAGAACTCGACCATTCGCTTCATCAACACC AAGATGGGCTGGATCACCTGGCTGGCCCTGATCACCGTCATCACCTGGGTGGCATTTGTGATCGCCGAGGTCATT CCCTTCTTCTCGGATCTGCTGTCCATCTCCTCTTCGCTCTTCATCTCGGGCTTCACCTTCTACTTCCCCGCGCTG ATGTGGTTCTTGCTGGTGCGCGAGGGCAAGTGGAACACGCCCAAGAACCTGATGCTGGGGGCACTGAACCTGTGC TGCCTGATTATTGGTCTGGTGACGCTGGGGGCTGGTACCTATGCCAGTGTCGACGACATTGTAAGACCATCCTAT CTTCAATTCATCTCGATGATTATGATGCTAATATTCTTATTTTTCTAGATTCTCAACTACCGCAACGGTTCCGTG CGTGGTGTGTTCACCTGCGCTGCTCCGGAGTAG |