Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g8051.t1
Gene name
Locationscaffold_071:27081..27642
Strand-
Gene length (bp)561
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19271 Nis1 Nis1 family 6.0E-18 18 137

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g8051.t1
MKFTVAAVAAFAAGALAQNVQIASPKAGQTVQAGQKVIVQIERPTPPTNVEEMAIAIGLQSCASATCYPASEVLG
HVLYNGAFDPEYHEWYLPQYQNFTVTIPEGTASGKAVLGVAHASLIGASFEPYLQTLSQNITIA*
Coding >Ani_SJS72_1|g8051.t1
ATGAAATTCACTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGCTCAGAATGTCCAGATCGCCTCCCCC
AAGGCCGGCCAGACGGTCCAGGCGGGACAGAAGGTGATTGTTCAGATTGAGCGTCCCACTCCCCCCACCAACGTC
GAGGAAATGGCCATCGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTGCTACCCGGCCTCGGAAGTCCTGGGC
CACGTCCTGTACAATGGCGCGTTTGACCCCGAGTACCACGAGTGGTACTTGCCCCAGTATCAGAACTTCACCGTG
ACCATTCCCGAGGGCACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCATGCTTCCCTGATTGGAGCTTCGTTT
GAGCCCTATCTCCAGACCCTGAGTCAGAACATCACGATCGCATAG
Transcript >Ani_SJS72_1|g8051.t1
ATGAAATTCACTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGCTCAGAATGTCCAGATCGCCTCCCCC
AAGGCCGGCCAGACGGTCCAGGCGGGACAGAAGGTGATTGTTCAGATTGAGCGTCCCACTCCCCCCACCAACGTC
GAGGAAATGGCCATCGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTGCTACCCGGCCTCGGAAGTCCTGGGC
CACGTCCTGTACAATGGCGCGTTTGACCCCGAGTACCACGAGTGGTACTTGCCCCAGTATCAGAACTTCACCGTG
ACCATTCCCGAGGGCACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCATGCTTCCCTGATTGGAGCTTCGTTT
GAGCCCTATCTCCAGACCCTGAGTCAGAACATCACGATCGCATAG
Gene >Ani_SJS72_1|g8051.t1
ATGAAATTCACTGTCGCCGCTGTCGCTGCCTTCGCTGCTGGAGCACTGGCTCAGAATGTCCAGATCGCCTCCCCC
AAGGCCGGCCAGACGGTCCAGGCGGGACAGAAGGTGATTGTTCAGATTGAGCGTCCCGTAAGTCCTGCGTCGTTG
TTACTCTCTCAACAAACCCGAATGACATGAAATGCGTCGTTTCACTAACCAAGATGTTTTGCGAATAGACTCCCC
CCACCAACGTCGAGGAAATGGCCATCGCCATCGGCCTGCAGTCCTGCGCCTCGGCTACCTGCTACCCGGCCTCGG
AAGTCCTGGGCCACGTCCTGTACAATGGCGCGTTTGACCCCGAGTACCACGAGTGGTACTTGCCCCAGTATCAGA
ACTTCACCGTGACCATTCCCGAGGGCACGGCTTCGGGCAAGGCGGTGCTGGGTGTTGCTCATGCTTCCCTGATTG
GAGTAAGTTGATCGCCATTTCAACCGGTGAACCTCTGCTGATTTGCTTGTGCTCTAGGCTTCGTTTGAGCCCTAT
CTCCAGACCCTGAGTCAGAACATCACGATCGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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