Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g7891.t1
Gene name
Locationscaffold_068:10671..12043
Strand+
Gene length (bp)1372
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00544 Pectate_lyase_4 Pectate lyase 3.2E-19 122 296

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999668

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
PL1_4 2.3E-88 114 298

Secondary Metabolism

Gene cluster ID Type of secondary metabolism gene
Cluster 57 (None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup6083
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g2997.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g7222.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g3495.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g1336.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g2554.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g8732.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g5879.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g3683.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g7561.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g2411.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g10074.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g5619.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g7416.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g3257.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g4402.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g7891.t1 (this protein)
Aspergillus niger CBS 147346 Ani_SJS75_1|g9460.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g3231.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g5525.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g5808.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g9043.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g8882.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g6743.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g5237.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g7891.t1
MHYKLLFAAAAASLASAVSAAGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDRTFDFTGTE
GTETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVS
GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSAT
CNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVN
TVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGNIAQWTMKNA
GQGK*
Coding >Ani_SJS72_1|g7891.t1
ATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGTTGTTGGT
GCCGCCGAGGGTTTCGCCCATGGTGTCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAG
CTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAGAACCTTCGACTTCACCGGCACTGAG
GGTACTGAAACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATCAACCTGCACAGC
TGGTGTGACAACTACCAGGCTAGCGCCCCCAAGGTATCCGTGACTTATGATAAGGCGGGTATCCTCCCCATTACG
GTCAACTCCAACAAAAGTATCGTTGGTCAGGGCACCAAGGGAGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGC
GGTGCCAAGAACGTCATCATCCAGAACATTGCCGTTACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCC
ATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGCTCGCATTGGTCGCCAGCACATCGTT
CTGGGAACCAGCGCCGACAACCGCGTCACCATCTCCTACTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACC
TGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTCACCCTTAAGGGCAACTACTTC
TACAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCGTGAACAACCTCTTCCACAAC
TTTGACGGCCACGCCTTCGAAATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAAC
ACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCAACACCAACCAGCAGTGCGCCTCC
GTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATC
AGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGAACGCT
GGCCAGGGCAAATAA
Transcript >Ani_SJS72_1|g7891.t1
ATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGTTGTTGGT
GCCGCCGAGGGTTTCGCCCATGGTGTCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAG
CTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAGAACCTTCGACTTCACCGGCACTGAG
GGTACTGAAACTACCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATCAACCTGCACAGC
TGGTGTGACAACTACCAGGCTAGCGCCCCCAAGGTATCCGTGACTTATGATAAGGCGGGTATCCTCCCCATTACG
GTCAACTCCAACAAAAGTATCGTTGGTCAGGGCACCAAGGGAGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGC
GGTGCCAAGAACGTCATCATCCAGAACATTGCCGTTACCGACATCAACCCCAAGTATGTCTGGGGTGGTGATGCC
ATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGCTCGCATTGGTCGCCAGCACATCGTT
CTGGGAACCAGCGCCGACAACCGCGTCACCATCTCCTACTCCCTCATCGATGGTCGCTCCGACTACTCTGCCACC
TGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACATGGTCACCCTTAAGGGCAACTACTTC
TACAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCACGCCGTGAACAACCTCTTCCACAAC
TTTGACGGCCACGCCTTCGAAATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGACGTTAAC
ACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCAACACCAACCAGCAGTGCGCCTCC
GTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAGCATCATC
AGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAAGAACGCT
GGCCAGGGCAAATAA
Gene >Ani_SJS72_1|g7891.t1
ATGCATTACAAACTGCTTTTTGCTGCTGCCGCAGCATCCTTGGCCAGCGCTGTCAGTGCCGCCGGTGTTGTTGGT
GCCGCCGAGGGTTTCGCCCATGGTGTCACTGGCGGTGGCAGCGCTTCCCCCGTCTATCCTACGACTACTGATGAG
CTGGTCTCTTACCTCGGAGATAACGAGCCCCGGGTGATTATCCTGGATAGAACGTAGGTCGATCCTCAATTGGAA
ATGGATGGGTAGACGTGGGCCTAACAGGTTGATAATCCAGCTTCGACTTCACCGGCACTGAGGGTACTGAAACTA
CCACCGGATGTGCCCCCTGGGGAACTGCTTCCCAATGCCAGGTGGCCATCAACCTGCACAGCTGGTGTGACAACT
ACCAGGCTAGCGCCCCCAAGGTATCCGTGACTTAGTATGTTGTCCCCGTTCGATTGGTGACCCTGTCTTTCCATG
CTGATAGCCGTATAGTGATAAGGCGGGTATCCTCCCCATTACGGTCAACTCCAACAAAAGTATCGTTGGTCAGGG
CACCAAGGGAGTCATCAAGGGCAAGGGTCTCCGTGTGGTCAGCGGTGCCAAGAACGTCATCATCCAGTGAGTGCA
GAACATCGGTCTTAGGATGTGAAAAAACCCTTTGCTAATAAAGGCCAGGAACATTGCCGTTACCGACATCAACCC
CAAGTATGTCTGGGGTGGTGATGCCATTACTGTCGATGACTCTGATCTGGTCTGGATCGACCATGTGACCACTGC
TCGCATTGGTCGCCAGCACATCGTTCTGGGAACCAGCGCCGACAACCGCGTCACCATCTCCTACTCCCTCATCGA
TGGTCGCTCCGACTACTCTGCCACCTGCAACGGCCACCACTACTGGGGCGTGTACCTGGACGGCAGCAACGACAT
GGTCACCCTTAAGGGCAACTACTTCTACAACCTGAGCGGCCGCATGCCCAAGGTTCAGGGTAACACTCTGCTGCA
CGCCGTATGTCGCCTTGAGCCTCCTATATGATTTGCACATTACTGACAAGTCTGACTACAGGTGAACAACCTCTT
CCACAACTTTGACGGCCACGCCTTCGAAATCGGCACTGGTGGCTACGTCCTGGCCGAGGGTAACGTCTTCCAGGA
CGTTAACACTGTGGTGGAGACGCCCATCAGCGGCCAGCTCTTCAGCTCCCCCGACGCCAACACCAACCAGCAGTG
CGCCTCCGTCTTCGGTCGTTCCTGCCAGCTCAACGCCTTCGGCAACTCCGGCTCGATGTCCGGATCGGACACCAG
CATCATCAGCAAGTTCGCTGGCAAGACCATTGCTGCGGCTCACCCCCCGGGTAACATTGCCCAGTGGACCATGAA
GAACGCTGGCCAGGGCAAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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