© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7888.t1 |
| Gene name | |
| Location | scaffold_068:4419..6391 |
| Strand | - |
| Gene length (bp) | 1972 |
| Transcript length (bp) | 1569 |
| Coding sequence length (bp) | 1569 |
| Protein length (aa) | 523 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 6.9E-52 | 68 | 494 |
| PF00324 | AA_permease | Amino acid permease | 3.0E-21 | 67 | 500 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 82 | 99 | 17 |
| 3 | 136 | 158 | 22 |
| 4 | 173 | 195 | 22 |
| 5 | 200 | 222 | 22 |
| 6 | 242 | 261 | 19 |
| 7 | 282 | 304 | 22 |
| 8 | 319 | 341 | 22 |
| 9 | 385 | 407 | 22 |
| 10 | 411 | 433 | 22 |
| 11 | 453 | 475 | 22 |
| 12 | 485 | 507 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7888.t1 MWPEKGSKSVAYTTAPEEGSMPSTKGGTTQDGRDMWRVGRDQELNRNFRFLSVLGFSAVLMCTWEAVLFGASYGL TDGGKGGMIYTYLGVLCGFSFVILSMAEMASMAPTSGGQYHWVSEFAPPSCQCLLSYITGWVCVLGWHTGIAGCS YTVANMLVGLLAINYPDSYEYKPWHVTLLVIAVALAALLFNTLLAQKLPLIEGIILIVHCFGFFGILIPLWVLSP SVPPSDVFGSIVDRGGWGSNGLSCLVGVVGPIYALIGPDSAVHMSEEIRDASRVLPLGMVWTLILNGATGFVMIV TFAFCVGDIDEVMASTTGFAFIQVFLNSTGSVPAATGMTVVIMIMQFCATISNVATTSRQIYSFARDQGVPFSSF FSQVNKTFTVPLNALCVSLVIVSLLSLINIGSSVAFNAIMSLGTAALLSSYLISISCVRLRRWRKQPLPPARWSM GRFTPFVDTVSLLVLMVVFVFTFFPLTNDTAPSEFNWAIVIFGAVVVFALVYYALYARKVYKGPVTRVRVAQ* |
| Coding | >Ani_SJS72_1|g7888.t1 ATGTGGCCTGAGAAAGGGAGCAAGTCGGTCGCCTACACCACCGCACCGGAGGAGGGCTCTATGCCCTCCACCAAG GGCGGAACCACTCAAGATGGCCGTGATATGTGGCGTGTGGGACGCGATCAGGAGTTGAATCGCAATTTTCGATTC CTCTCGGTGCTGGGTTTCAGCGCCGTGCTGATGTGCACCTGGGAGGCAGTGTTGTTCGGTGCCTCATATGGCCTG ACCGATGGAGGAAAAGGTGGAATGATCTACACCTACCTCGGTGTCCTCTGCGGATTCAGCTTCGTAATTCTCTCC ATGGCGGAGATGGCATCCATGGCCCCAACCTCCGGCGGCCAATACCACTGGGTGTCCGAATTCGCCCCGCCCAGT TGCCAGTGCCTGTTGAGTTATATTACAGGCTGGGTATGTGTGCTTGGATGGCATACAGGCATTGCTGGCTGCAGC TACACCGTAGCAAACATGCTAGTCGGACTCTTGGCAATCAACTACCCAGATTCCTATGAATATAAGCCGTGGCAC GTTACGTTGTTAGTCATTGCAGTGGCGTTGGCTGCACTGCTCTTCAACACGCTGCTGGCACAGAAGCTGCCGCTG ATTGAGGGAATAATCCTGATTGTCCACTGCTTTGGCTTCTTTGGCATCCTGATTCCTCTGTGGGTGCTGTCTCCG TCAGTGCCACCATCAGACGTCTTCGGCTCAATTGTCGACCGTGGCGGATGGGGCAGCAACGGACTATCCTGCTTG GTTGGGGTGGTTGGGCCAATATATGCTTTGATCGGCCCTGACTCGGCTGTGCACATGTCCGAGGAGATTCGTGAT GCATCGCGCGTGCTTCCCCTAGGCATGGTTTGGACGCTTATATTGAATGGTGCCACCGGGTTCGTCATGATTGTT ACTTTCGCCTTTTGCGTGGGAGACATCGACGAGGTCATGGCCTCAACCACCGGTTTCGCCTTTATCCAGGTGTTC CTGAACTCGACTGGCTCGGTGCCCGCAGCAACGGGAATGACGGTGGTAATCATGATAATGCAGTTCTGTGCCACG ATCAGCAATGTGGCCACCACTTCCCGACAGATCTACTCATTCGCTCGTGACCAAGGCGTCCCATTCTCTAGCTTC TTCTCTCAGGTCAACAAGACATTTACAGTACCACTGAACGCCCTTTGTGTCAGCTTGGTGATTGTCTCCCTTCTA TCCTTAATCAACATCGGATCCTCCGTGGCCTTCAACGCCATCATGTCGCTAGGGACGGCCGCCCTGCTGTCATCG TACCTGATTTCCATCAGTTGCGTGCGGCTGCGACGATGGCGCAAACAGCCTCTCCCACCGGCGCGCTGGAGCATG GGTCGGTTCACTCCATTCGTTGACACGGTGTCTCTGCTGGTGCTGATGGTTGTCTTCGTCTTTACCTTCTTTCCC CTAACAAACGATACTGCACCGTCCGAATTTAACTGGGCGATTGTCATTTTTGGCGCCGTCGTGGTGTTTGCCTTG GTATATTATGCTCTCTATGCCCGGAAGGTATACAAGGGGCCGGTGACGCGGGTGCGGGTGGCACAATAA |
| Transcript | >Ani_SJS72_1|g7888.t1 ATGTGGCCTGAGAAAGGGAGCAAGTCGGTCGCCTACACCACCGCACCGGAGGAGGGCTCTATGCCCTCCACCAAG GGCGGAACCACTCAAGATGGCCGTGATATGTGGCGTGTGGGACGCGATCAGGAGTTGAATCGCAATTTTCGATTC CTCTCGGTGCTGGGTTTCAGCGCCGTGCTGATGTGCACCTGGGAGGCAGTGTTGTTCGGTGCCTCATATGGCCTG ACCGATGGAGGAAAAGGTGGAATGATCTACACCTACCTCGGTGTCCTCTGCGGATTCAGCTTCGTAATTCTCTCC ATGGCGGAGATGGCATCCATGGCCCCAACCTCCGGCGGCCAATACCACTGGGTGTCCGAATTCGCCCCGCCCAGT TGCCAGTGCCTGTTGAGTTATATTACAGGCTGGGTATGTGTGCTTGGATGGCATACAGGCATTGCTGGCTGCAGC TACACCGTAGCAAACATGCTAGTCGGACTCTTGGCAATCAACTACCCAGATTCCTATGAATATAAGCCGTGGCAC GTTACGTTGTTAGTCATTGCAGTGGCGTTGGCTGCACTGCTCTTCAACACGCTGCTGGCACAGAAGCTGCCGCTG ATTGAGGGAATAATCCTGATTGTCCACTGCTTTGGCTTCTTTGGCATCCTGATTCCTCTGTGGGTGCTGTCTCCG TCAGTGCCACCATCAGACGTCTTCGGCTCAATTGTCGACCGTGGCGGATGGGGCAGCAACGGACTATCCTGCTTG GTTGGGGTGGTTGGGCCAATATATGCTTTGATCGGCCCTGACTCGGCTGTGCACATGTCCGAGGAGATTCGTGAT GCATCGCGCGTGCTTCCCCTAGGCATGGTTTGGACGCTTATATTGAATGGTGCCACCGGGTTCGTCATGATTGTT ACTTTCGCCTTTTGCGTGGGAGACATCGACGAGGTCATGGCCTCAACCACCGGTTTCGCCTTTATCCAGGTGTTC CTGAACTCGACTGGCTCGGTGCCCGCAGCAACGGGAATGACGGTGGTAATCATGATAATGCAGTTCTGTGCCACG ATCAGCAATGTGGCCACCACTTCCCGACAGATCTACTCATTCGCTCGTGACCAAGGCGTCCCATTCTCTAGCTTC TTCTCTCAGGTCAACAAGACATTTACAGTACCACTGAACGCCCTTTGTGTCAGCTTGGTGATTGTCTCCCTTCTA TCCTTAATCAACATCGGATCCTCCGTGGCCTTCAACGCCATCATGTCGCTAGGGACGGCCGCCCTGCTGTCATCG TACCTGATTTCCATCAGTTGCGTGCGGCTGCGACGATGGCGCAAACAGCCTCTCCCACCGGCGCGCTGGAGCATG GGTCGGTTCACTCCATTCGTTGACACGGTGTCTCTGCTGGTGCTGATGGTTGTCTTCGTCTTTACCTTCTTTCCC CTAACAAACGATACTGCACCGTCCGAATTTAACTGGGCGATTGTCATTTTTGGCGCCGTCGTGGTGTTTGCCTTG GTATATTATGCTCTCTATGCCCGGAAGGTATACAAGGGGCCGGTGACGCGGGTGCGGGTGGCACAATAA |
| Gene | >Ani_SJS72_1|g7888.t1 ATGTGGCCTGAGAAAGGGAGCAAGTCGGTCGCCTACACCACCGCACCGGAGGAGGGCTCTATGCCCTCCACCAAG GGCGGAACCACTCAAGATGGCCGTGATATGTGGCGTGTGGGACGCGATCAGGAGTTGAATGTGAGTACACACTGG AGAGGTGGCTGCAAACCCGGCTCCCTAGCTAACTGGCCAGCGCAATTTTCGATTCCTCTCGGTGCTGGGTTTCAG CGCCGTGCTGATGTGCACCTGGGAGGCAGTGTTGTTGTAAGTCAATGCAATACGAACAAGGCACCGCGATAGAGT ACTGATAACTGAACAGCGGTGCCTCATATGGCCTGACCGATGGAGGAAAAGGTGGAATGATCTACACCTACCTCG GTGTCCTCTGCGGATTCAGCTTCGTAATTCTCTCCATGGCGGAGATGGCATCCATGTGTGATACCCTCAAACACC AAGCTTTGCTTTTTCTCTCTTCATGCTGTGTGCTTTGATACCTGTAGCTGCTTCTAGGAATTGGCTGTTAACAAT TGGCATATAGGGCCCCAACCTCCGGCGGCCAATACCACTGGGTGTCCGAATTCGCCCCGCCCAGTTGCCAGTGCC TGTTGAGTTATATTACAGGCTGGGTATGTGTGCTTGGATGGCATACAGGCATTGCTGGCTGCAGCTACACCGTAG CAAACATGCTAGTCGGACTCTTGGCAATCAACTACCCAGATTCCTATGAATATAAGCCGTGGCACGTTACGTTGT TAGTCATTGCAGTGGCGTTGGCTGCACTGCTCTTCAACACGCTGCTGGCACAGAAGCTGCCGCTGATTGAGGGAA TAATCCTGATTGTCCACTGCTTTGGCTTCTTTGGCATCCTGATTCCTCTGTGGGTGCTGTCTCCGTCAGTGCCAC CATCAGACGTCTTCGGCTCAATTGTCGACCGTGGCGGATGGGGCAGCAACGGACTATCCTGCTTGGTTGGGGTGG TTGGGCCAATATATGCTTTGATCGGTACGTCGCATTGACCAAGAGAAGCGAAGTATATCGCGCCTTGAAGCGATA CTGACTGATGCTCAGGCCCTGACTCGGCTGTGCACATGTGTATGTCTCTTCTTGCTGCGACGAGGCATCTTGCAT GATCAACTAACTCAGTAACAAGCCGAGGAGATTCGTGATGCATCGCGCGTGCTTCCCCTAGGCATGGTTTGGACG CTTATATTGAATGGTGCCACCGGGTTCGTCATGATTGTTACTTTCGCCTTTTGCGTGGGAGACATCGACGAGGTC ATGGCCTCAACCACCGGTTTCGCCTTTATCCAGGTGTTCCTGAACTCGACTGGCTCGGTGCCCGCAGCAACGGGA ATGACGGTGGTAATCATGATAATGCAGTTCTGTGCCACGATCAGCAATGTGGCCACCACTTCCCGACAGATCTAC TCATTCGCTCGTGACCAAGGCGTCCCATTCTCTAGCTTCTTCTCTCAGGTGGCGTTCCCTTTGGTGATTCACCAC TTCTGGCAGATGAGATCAAACTGACCCTATAGATCAGGTCAACAAGACATTTACAGTACCACTGAACGCCCTTTG TGTCAGCTTGGTGATTGTCTCCCTTCTATCCTTAATCAACATCGGATCCTCCGTGGCCTTCAACGCCATCATGTC GCTAGGGACGGCCGCCCTGCTGTCATCGTACCTGATTTCCATCAGTTGCGTGCGGCTGCGACGATGGCGCAAACA GCCTCTCCCACCGGCGCGCTGGAGCATGGGTCGGTTCACTCCATTCGTTGACACGGTGTCTCTGCTGGTGCTGAT GGTTGTCTTCGTCTTTACCTTCTTTCCCCTAACAAACGATACTGCACCGTCCGAATTTAACTGGGCGATTGTCAT TTTTGGCGCCGTCGTGGTGTTTGCCTTGGTATATTATGCTCTCTATGCCCGGAAGGTATACAAGGGGCCGGTGAC GCGGGTGCGGGTGGCACAATAA |