© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g7824.t1 |
| Gene name | |
| Location | scaffold_066:165641..167311 |
| Strand | + |
| Gene length (bp) | 1670 |
| Transcript length (bp) | 1611 |
| Coding sequence length (bp) | 1611 |
| Protein length (aa) | 537 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-112 | 49 | 508 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.5E-19 | 54 | 417 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 2.8E-06 | 42 | 236 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 91 | 110 | 19 |
| 3 | 117 | 139 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 174 | 196 | 22 |
| 6 | 211 | 230 | 19 |
| 7 | 310 | 329 | 19 |
| 8 | 344 | 366 | 22 |
| 9 | 373 | 395 | 22 |
| 10 | 410 | 432 | 22 |
| 11 | 444 | 466 | 22 |
| 12 | 470 | 492 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7824.t1 MHQVLKEDGTTVEHDERGTLGVEAVDMLPSYGPDGVRGLFSSGYVLGAACLASLGGFSFGYDQGVISVINVMPQF HAAIPQAESEFGKGFMTGMLLLGAFVGCIFMPYLADRISRKWALTVVVIIFDIGAVIQTSAQSYGMLVAGRAIGG IGVGTLAMGAPLYISEISPPNLRGTLLVLESICLVSGAVIAYWVTFGMRLVDSEASFRVPFGLQMVSATLVGVGI HFFPYSPRWLALVDRQEDCLKSLSRLRGLPLSDQKVQAEYNAIIGEVRAQKLMEQQQRPGVTGIKREALIWMDLF RPQTWKRTAVGVGVGFFQQFSGVNAFIYYAPTLFQLIGQKGEMSLILSGVFNTLQLLTVLVCFLTIDKVGRRPLA ILGGFLMGACYIIIAVLMALYGPDWANPSAGWGCVAVAFLYILIYGNTYSPLGWALPSEVFPNALRSKGVALSTC VNWLSNFIVGIVTPVMMANIGYGTYVFFAACCVLAGTWAFFLVPETTGRTLEQIDEVFGNISKQAHHEFMRETTF QAARGEGRLDV* |
| Coding | >Ani_SJS72_1|g7824.t1 ATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAGCATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTG GATATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTC CATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATT TTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT ATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAACC CTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTA GTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATC CATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGG CTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCAG AAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTC AGGCCGCAGACCTGGAAGAGGACAGCAGTCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCG TTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTA TTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCG ATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGG GCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTCG CCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGC GTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATAC GTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACA CTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCATGAATTTATGAGGGAAACTACTTTC CAAGCGGCTAGAGGGGAAGGGAGGCTTGACGTGTGA |
| Transcript | >Ani_SJS72_1|g7824.t1 ATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAGCATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTG GATATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTC CATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATT TTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT ATTGGGGTTGGTACACTGGCTATGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAACC CTCTTAGTGCTCGAATCCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTA GTTGATAGTGAAGCTTCATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATC CATTTCTTCCCATACTCACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGG CTGCGCGGCCTTCCATTGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCAG AAACTCATGGAACAACAACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTC AGGCCGCAGACCTGGAAGAGGACAGCAGTCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCG TTTATTTACTACGCGCCCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTA TTCAATACCCTCCAGCTTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCG ATACTAGGCGGTTTCCTGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGG GCTAACCCATCGGCCGGTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTCG CCTCTTGGTTGGGCCTTGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGC GTCAACTGGCTGTCCAATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATAC GTCTTTTTTGCCGCGTGCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACA CTGGAGCAGATTGACGAAGTTTTTGGCAATATTAGCAAACAAGCACACCATGAATTTATGAGGGAAACTACTTTC CAAGCGGCTAGAGGGGAAGGGAGGCTTGACGTGTGA |
| Gene | >Ani_SJS72_1|g7824.t1 ATGCATCAAGTGTTGAAAGAGGATGGTACTACGGTGGAGCATGATGAGAGAGGCACCCTTGGTGTTGAAGCGGTG GATATGCTGCCCTCATATGGCCCGGATGGCGTCAGAGGGCTTTTCAGCTCGGGGTATGTTCTTGGAGCCGCCTGC CTTGCTTCTCTTGGGGGTTTCAGCTTTGGGTATGACCAGGGAGTCATATCAGTCATCAATGTCATGCCACAATTC CATGCGGCTATCCCGCAGGCGGAGAGTGAATTTGGCAAAGGGTTTATGACAGGCATGCTACTCCTCGGGGCATTT GTCGGTTGTATCTTCATGCCTTATCTTGCAGACAGGATCTCCAGGAAATGGGCCCTGACGGTGGTCGTTATCATT TTTGACATTGGGGCCGTTATCCAGACCTCGGCCCAAAGTTACGGCATGCTGGTTGCCGGAAGAGCAATTGGTGGT ATTGGGGTTGGTACACTGGCTATGGTATGGATGAATCTCCGGCCGAATGCAACATATTGCTTGCTAATATATCTG GCTACTAGGGCGCACCGCTTTATATCTCAGAAATTTCACCACCAAACCTGCGGGGAACCCTCTTAGTGCTCGAAT CCATTTGCCTCGTGTCCGGCGCGGTCATAGCTTATTGGGTAACGTTCGGCATGAGATTAGTTGATAGTGAAGCTT CATTCCGTGTGCCTTTTGGCTTGCAGATGGTCAGTGCAACTCTTGTTGGGGTCGGTATCCATTTCTTCCCATACT CACCACGGTGGTTGGCGCTCGTTGATCGGCAGGAGGATTGCCTCAAGAGTCTGAGTCGGCTGCGCGGCCTTCCAT TGAGCGATCAGAAAGTCCAAGCTGAATACAACGCAATCATCGGTGAGGTTAGAGCCCAGAAACTCATGGAACAAC AACAGCGCCCGGGCGTGACTGGCATCAAGCGAGAGGCTCTGATATGGATGGACCTATTCAGGCCGCAGACCTGGA AGAGGACAGCAGTCGGTGTGGGTGTAGGGTTTTTCCAACAATTCTCGGGGGTCAATGCGTTTATTTACTACGCGC CCACGCTTTTCCAATTGATCGGCCAGAAGGGCGAGATGTCATTGATCTTGTCAGGTGTATTCAATACCCTCCAGC TTCTCACTGTCCTGGTTTGTTTCTTAACAATCGACAAAGTTGGTCGGCGCCCCTTGGCGATACTAGGCGGTTTCC TGATGGGAGCCTGCTATATTATCATTGCCGTGCTGATGGCTCTTTATGGGCCCGACTGGGCTAACCCATCGGCCG GTTGGGGCTGCGTGGCGGTGGCCTTTCTTTACATCCTCATCTACGGGAACACATACTCGCCTCTTGGTTGGGCCT TGCCTTCTGAGGTCTTCCCCAATGCACTTCGTTCGAAAGGGGTTGCGTTATCAACTTGCGTCAACTGGCTGTCCA ATTTTATTGTTGGGATCGTGACTCCGGTGATGATGGCTAATATTGGTTATGGCACATACGTCTTTTTTGCCGCGT GCTGTGTTCTCGCAGGAACGTGGGCCTTTTTTCTGGTTCCCGAGACAACCGGCAGAACACTGGAGCAGATTGACG AAGTTTTTGGCAATATTAGCAAACAAGCACACCATGAATTTATGAGGGAAACTACTTTCCAAGCGGCTAGAGGGG AAGGGAGGCTTGACGTGTGA |