Protein ID | Ani_SJS72_1|g7817.t1 |
Gene name | |
Location | scaffold_066:144295..146420 |
Strand | + |
Gene length (bp) | 2125 |
Transcript length (bp) | 2055 |
Coding sequence length (bp) | 2055 |
Protein length (aa) | 685 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 7.5E-05 | 75 | 104 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 5.4E-03 | 124 | 151 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 2.0E-06 | 184 | 202 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 1.1E-02 | 242 | 258 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 2.9E-02 | 355 | 368 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 5.1E-05 | 557 | 591 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g7817.t1 MHVTKTWAWLALATATLVSGASHYEGQGHAARRAASDTYKGTFLHNRISPNYSELYIAEPDGSNAKLLLGSNSVY DFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTSTVGAEVEPVALSPGVDDSASISPDGKMLAFATSRYNQTS QIMLMVLETGSLKNLTLIPGISEAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAA RPNGTDFRLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQPELLEGSYLNTSIVSIDFATGGDRIVHAT GDGTKISPSFVTDDVIGYVMKESASNGIYYTSLSGKNYTQYQTIPMNTMTPALRSPAWSPDGKYVIYEKQGPTGG STSTSKKQYSDLWNFDPDWDYRFTDVFPMAKRGGCPMMAMSQQMEGVAESNLMRLQMNGTDQVTLFETKKGMINP SIAEGFNARAYQGSWGPNDTNITFGYGAYFVGRQSSPGFIFSVTPEGTGVTLLAGNNITNYGFPSYNYDGTQVVF RTWPGTASNGTTVGTTGLAIVDLPSRQVTQLTTEWDNLPAFSPDGKKILFTRRTNLDNIGDNYDIFTMNPDGSEL TKLTPSIASDAHAVWTQNGRILYSTAMFGFQQEAPLYDDSMQPYAIIMLMEADGSNKTALSNSLWEDAMPMFAPA HVMESDCCS* |
Coding | >Ani_SJS72_1|g7817.t1 ATGCATGTTACGAAGACATGGGCCTGGCTTGCATTAGCCACTGCCACGCTGGTCTCTGGTGCGTCACACTATGAA GGCCAGGGTCATGCCGCTAGAAGAGCAGCCTCAGACACATATAAGGGGACCTTTCTACACAATCGCATCAGTCCC AACTACTCCGAGCTGTACATTGCCGAACCAGATGGCTCTAACGCGAAGCTCCTCCTTGGTTCCAACAGCGTGTAC GATTTCCGAGCAAGCTGGTCTCCTGATGCCAAACATGTTTATTTCACGTCAGAAAGAAGAGGGGACGGCCAGGCG GACATTTACCGCGTGGCCATAAATGGCACGAGCACGGTGGGAGCAGAAGTCGAACCTGTCGCCTTGTCACCAGGT GTCGACGACTCTGCTTCAATCTCCCCTGATGGCAAGATGCTGGCGTTTGCAACTTCGAGATACAATCAGACCAGT CAGATCATGCTGATGGTCCTGGAAACGGGATCTCTCAAGAACCTGACGCTCATTCCTGGTATCTCCGAAGCTGCC AACTCCGCACTACCCAATGGATACTTCAAGCCGACATGGTCCCCCGATGGAGAGTGGATTGTCTTCACGTCCGAT CGTAACACACCATGGCGTGGCCACAGCGACGGTTCGGGATGGGAGCATACCCAGGAGTTGTCCATCTACGCAGCC CGCCCTAATGGCACCGACTTCCGACTGGTGTCGTCTCGGAGCAACTACACCCAAGGCTCGCCTAGGTTCTCGCCG AATGGAAAGCGCCTGGTCTTCTACGAGATGCTGACCGAGGACACGTACAATGGTCGTCTACAGCCTGAACTGCTT GAAGGTTCTTATCTTAACACCAGCATCGTCTCAATCGATTTCGCCACTGGAGGTGACCGTATCGTTCATGCCACT GGAGATGGCACCAAGATTAGCCCTTCATTTGTCACCGATGATGTTATTGGCTATGTTATGAAAGAGTCAGCCAGC AACGGTATCTACTACACGTCTCTCTCGGGCAAAAATTACACGCAGTACCAGACCATTCCCATGAACACCATGACA CCTGCACTACGCTCCCCTGCGTGGTCGCCAGATGGCAAATATGTCATCTATGAGAAGCAGGGTCCCACGGGCGGT AGTACATCGACTTCCAAGAAGCAATACTCCGACCTGTGGAACTTCGACCCGGATTGGGACTACCGCTTCACGGAT GTCTTCCCCATGGCCAAGCGTGGAGGCTGCCCTATGATGGCCATGTCCCAGCAGATGGAGGGTGTCGCGGAGAGC AATCTCATGCGCCTCCAAATGAACGGCACTGATCAGGTCACTCTCTTCGAGACCAAAAAGGGCATGATCAATCCA TCCATTGCAGAAGGCTTCAACGCCCGTGCCTACCAGGGCAGCTGGGGGCCCAATGATACGAACATCACGTTCGGC TACGGTGCATACTTTGTCGGTCGTCAAAGTAGCCCCGGTTTCATTTTCAGTGTCACCCCGGAGGGCACGGGCGTG ACGCTTCTCGCGGGCAACAACATTACCAACTACGGATTCCCGTCCTATAATTATGATGGCACTCAGGTCGTTTTC CGAACCTGGCCTGGCACTGCCTCCAACGGTACCACTGTTGGTACGACCGGATTAGCCATTGTTGATCTACCCTCC CGGCAGGTGACGCAGCTCACGACCGAGTGGGATAATCTTCCGGCCTTCTCTCCCGATGGCAAGAAGATTCTGTTC ACCCGGCGCACAAACCTGGACAATATCGGCGACAACTATGACATTTTCACTATGAATCCCGACGGCAGTGAACTT ACCAAGCTCACCCCATCTATCGCCAGTGACGCCCATGCTGTGTGGACCCAAAACGGCCGTATCCTTTACAGTACT GCTATGTTCGGCTTCCAGCAGGAGGCACCCTTATATGATGACTCTATGCAGCCCTATGCTATCATCATGCTCATG GAAGCCGATGGTAGTAACAAGACTGCGTTGTCAAACAGTTTGTGGGAAGATGCCATGCCTATGTTTGCGCCAGCG CATGTAATGGAGTCCGACTGTTGTTCTTGA |
Transcript | >Ani_SJS72_1|g7817.t1 ATGCATGTTACGAAGACATGGGCCTGGCTTGCATTAGCCACTGCCACGCTGGTCTCTGGTGCGTCACACTATGAA GGCCAGGGTCATGCCGCTAGAAGAGCAGCCTCAGACACATATAAGGGGACCTTTCTACACAATCGCATCAGTCCC AACTACTCCGAGCTGTACATTGCCGAACCAGATGGCTCTAACGCGAAGCTCCTCCTTGGTTCCAACAGCGTGTAC GATTTCCGAGCAAGCTGGTCTCCTGATGCCAAACATGTTTATTTCACGTCAGAAAGAAGAGGGGACGGCCAGGCG GACATTTACCGCGTGGCCATAAATGGCACGAGCACGGTGGGAGCAGAAGTCGAACCTGTCGCCTTGTCACCAGGT GTCGACGACTCTGCTTCAATCTCCCCTGATGGCAAGATGCTGGCGTTTGCAACTTCGAGATACAATCAGACCAGT CAGATCATGCTGATGGTCCTGGAAACGGGATCTCTCAAGAACCTGACGCTCATTCCTGGTATCTCCGAAGCTGCC AACTCCGCACTACCCAATGGATACTTCAAGCCGACATGGTCCCCCGATGGAGAGTGGATTGTCTTCACGTCCGAT CGTAACACACCATGGCGTGGCCACAGCGACGGTTCGGGATGGGAGCATACCCAGGAGTTGTCCATCTACGCAGCC CGCCCTAATGGCACCGACTTCCGACTGGTGTCGTCTCGGAGCAACTACACCCAAGGCTCGCCTAGGTTCTCGCCG AATGGAAAGCGCCTGGTCTTCTACGAGATGCTGACCGAGGACACGTACAATGGTCGTCTACAGCCTGAACTGCTT GAAGGTTCTTATCTTAACACCAGCATCGTCTCAATCGATTTCGCCACTGGAGGTGACCGTATCGTTCATGCCACT GGAGATGGCACCAAGATTAGCCCTTCATTTGTCACCGATGATGTTATTGGCTATGTTATGAAAGAGTCAGCCAGC AACGGTATCTACTACACGTCTCTCTCGGGCAAAAATTACACGCAGTACCAGACCATTCCCATGAACACCATGACA CCTGCACTACGCTCCCCTGCGTGGTCGCCAGATGGCAAATATGTCATCTATGAGAAGCAGGGTCCCACGGGCGGT AGTACATCGACTTCCAAGAAGCAATACTCCGACCTGTGGAACTTCGACCCGGATTGGGACTACCGCTTCACGGAT GTCTTCCCCATGGCCAAGCGTGGAGGCTGCCCTATGATGGCCATGTCCCAGCAGATGGAGGGTGTCGCGGAGAGC AATCTCATGCGCCTCCAAATGAACGGCACTGATCAGGTCACTCTCTTCGAGACCAAAAAGGGCATGATCAATCCA TCCATTGCAGAAGGCTTCAACGCCCGTGCCTACCAGGGCAGCTGGGGGCCCAATGATACGAACATCACGTTCGGC TACGGTGCATACTTTGTCGGTCGTCAAAGTAGCCCCGGTTTCATTTTCAGTGTCACCCCGGAGGGCACGGGCGTG ACGCTTCTCGCGGGCAACAACATTACCAACTACGGATTCCCGTCCTATAATTATGATGGCACTCAGGTCGTTTTC CGAACCTGGCCTGGCACTGCCTCCAACGGTACCACTGTTGGTACGACCGGATTAGCCATTGTTGATCTACCCTCC CGGCAGGTGACGCAGCTCACGACCGAGTGGGATAATCTTCCGGCCTTCTCTCCCGATGGCAAGAAGATTCTGTTC ACCCGGCGCACAAACCTGGACAATATCGGCGACAACTATGACATTTTCACTATGAATCCCGACGGCAGTGAACTT ACCAAGCTCACCCCATCTATCGCCAGTGACGCCCATGCTGTGTGGACCCAAAACGGCCGTATCCTTTACAGTACT GCTATGTTCGGCTTCCAGCAGGAGGCACCCTTATATGATGACTCTATGCAGCCCTATGCTATCATCATGCTCATG GAAGCCGATGGTAGTAACAAGACTGCGTTGTCAAACAGTTTGTGGGAAGATGCCATGCCTATGTTTGCGCCAGCG CATGTAATGGAGTCCGACTGTTGTTCTTGA |
Gene | >Ani_SJS72_1|g7817.t1 ATGCATGTTACGAAGACATGGGCCTGGCTTGCATTAGCCACTGCCACGCTGGTCTCTGGTGCGTCACACTATGAA GGCCAGGGTCATGCCGCTAGAAGAGCAGCCTCAGACACATATAAGGGGACCTTTCTACACAATCGCATCAGTCCC AACTACTCCGAGCTGTACATTGCCGAACCAGATGGCTCTAACGCGAAGCTCCTCCTTGGTTCCAACAGCGTGTAC GATTTCCGAGCAAGCTGGTCTCCTGATGCCAAACATGTTTATTTCACGTCAGAAAGAAGAGGGGACGGCCAGGCG GACATTTACCGCGTGGCCATAAATGGCACGAGCACGGTGGGAGCAGAAGTCGAACCTGTCGCCTTGTCACCAGGT GTCGACGACTCTGCTTCAATCTCCCCTGATGGCAAGATGCTGGCGTTTGCAACTTCGAGATACAATCAGACCAGT CAGATCATGCTGATGGTCCTGGAAACGGGATCTCTCAAGAACCTGACGCTCATTCCTGGTATCTCCGAAGCTGCC AACTCCGCACTACCCAATGGATACTTCAAGCCGACATGGTCCCCCGATGGAGAGTGGATTGTCTTCACGTCCGAT CGTAACACACCATGGCGTGGCCACAGCGACGGTTCGGGATGGGAGCATACCCAGGAGTTGTCCATCTACGCAGCC CGCCCTAATGGCACCGACTTCCGACTGGTGTCGTCTCGGAGCAACTACACCCAAGGCTCGCCTAGGTTCTCGCCG AATGGAAAGCGCCTGGTCTTCTACGAGATGCTGACCGAGGACACGTACAATGGTCGTCTACAGCCTGAACTGCTT GAAGGTTCTTATCTTAACACCAGCATCGTCTCAATCGATTTCGCCACTGGAGGTGACCGTATCGTTCATGCCACT GGAGATGGCACCAAGATTAGCCCTTCATTTGTCACCGATGATGTGAGTACTCAGGTCTAGCCAGCATAGGGCGAT TTGTTGTTTTTTACTTACCGATGAATGCGTTCACTAGGTTATTGGCTATGTTATGAAAGAGTCAGCCAGCAACGG TATCTACTACACGTCTCTCTCGGGCAAAAATTACACGCAGTACCAGACCATTCCCATGAACACCATGACACCTGC ACTACGCTCCCCTGCGTGGTCGCCAGATGGCAAATATGTCATCTATGAGAAGCAGGGTCCCACGGGCGGTAGTAC ATCGACTTCCAAGAAGCAATACTCCGACCTGTGGAACTTCGACCCGGATTGGGACTACCGCTTCACGGATGTCTT CCCCATGGCCAAGCGTGGAGGCTGCCCTATGATGGCCATGTCCCAGCAGATGGAGGGTGTCGCGGAGAGCAATCT CATGCGCCTCCAAATGAACGGCACTGATCAGGTCACTCTCTTCGAGACCAAAAAGGGCATGATCAATCCATCCAT TGCAGAAGGCTTCAACGCCCGTGCCTACCAGGGCAGCTGGGGGCCCAATGATACGAACATCACGTTCGGCTACGG TGCATACTTTGTCGGTCGTCAAAGTAGCCCCGGTTTCATTTTCAGTGTCACCCCGGAGGGCACGGGCGTGACGCT TCTCGCGGGCAACAACATTACCAACTACGGATTCCCGTCCTATAATTATGATGGCACTCAGGTCGTTTTCCGAAC CTGGCCTGGCACTGCCTCCAACGGTACCACTGTTGGTACGACCGGATTAGCCATTGTTGATCTACCCTCCCGGCA GGTGACGCAGCTCACGACCGAGTGGGATAATCTTCCGGCCTTCTCTCCCGATGGCAAGAAGATTCTGTTCACCCG GCGCACAAACCTGGACAATATCGGCGACAACTATGACATTTTCACTATGAATCCCGACGGCAGTGAACTTACCAA GCTCACCCCATCTATCGCCAGTGACGCCCATGCTGTGTGGACCCAAAACGGCCGTATCCTTTACAGTACTGCTAT GTTCGGCTTCCAGCAGGAGGCACCCTTATATGATGACTCTATGCAGCCCTATGCTATCATCATGCTCATGGAAGC CGATGGTAGTAACAAGACTGCGTTGTCAAACAGTTTGTGGGAAGATGCCATGCCTATGTTTGCGCCAGCGCATGT AATGGAGTCCGACTGTTGTTCTTGA |