Protein ID | Ani_SJS72_1|g7741.t1 |
Gene name | |
Location | scaffold_065:117386..118306 |
Strand | - |
Gene length (bp) | 920 |
Transcript length (bp) | 789 |
Coding sequence length (bp) | 789 |
Protein length (aa) | 263 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03896 | TRAP_alpha | Translocon-associated protein (TRAP), alpha subunit | 8.0E-14 | 52 | 250 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005789 | endoplasmic reticulum membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0016020 | membrane | No |
GO:0005575 | cellular_component | No |
GO:0031090 | organelle membrane | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999716 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 169 | 191 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 1218 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g7741.t1 MGRFGFLSLALLSVQALIGGSLAADAAEKEDLPETQLLSVTAHASFPASEIFGVKLVNGYPTEALITFANEEESP VTVNFIGGSLSAVEGESSQIVRNLTAHRYSVEIPAGQQESVSYSFATEMHPQDLLLTLASVISDTDGNLFTLYAY NGTVSVVEPETSIFDPQILFLYFFLLACFSGVVYFFYTVWIAPYFPQKRRAGKGPEYKKSAGASKKEAPVEAPSS PAVSSATTYNAEWIPAHHINRPEARKVKGSAKAKNRA* |
Coding | >Ani_SJS72_1|g7741.t1 ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGAT GCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAG ATCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCC GTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACT GCGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCAC CCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTAC AACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCCTGTACTTCTTCCTC CTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGC GCTGGAAAGGGCCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGC CCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGG AAGGTCAAGGGTAGCGCCAAGGCTAAGAACCGTGCCTAA |
Transcript | >Ani_SJS72_1|g7741.t1 ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGAT GCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAG ATCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCC GTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACT GCGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCAC CCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTAC AACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCCTGTACTTCTTCCTC CTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGC GCTGGAAAGGGCCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGC CCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGG AAGGTCAAGGGTAGCGCCAAGGCTAAGAACCGTGCCTAA |
Gene | >Ani_SJS72_1|g7741.t1 ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGTA CGTTCCCTCTCGCGTGACTCCCATCGTCCCACTGTCAATTGAGTTGCTGACGCGATGTCGCATGTTACTAGGATG CTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAGA TCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCCG TGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACTG CGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCACC CCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTACA ACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATGTAAGGCACTTTTCTCACAGCTC GCCGATAAGGCCAAGCTAACCCTATTGTTATTAGCCTCTTCCTGTACTTCTTCCTCCTGGCTTGCTTCTCTGGCG TCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGCGCTGGAAAGGGCCCCGAGT ACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGCCCTGCTGTCTCGTCTGCCA CTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGGAAGGTCAAGGGTAGCGCCA AGGCTAAGAACCGTGCCTAA |