Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g7741.t1
Gene name
Locationscaffold_065:117386..118306
Strand-
Gene length (bp)920
Transcript length (bp)789
Coding sequence length (bp)789
Protein length (aa) 263

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03896 TRAP_alpha Translocon-associated protein (TRAP), alpha subunit 8.0E-14 52 250

GO

GO Term Description Terminal node
GO:0005789 endoplasmic reticulum membrane Yes
GO:0110165 cellular anatomical entity No
GO:0016020 membrane No
GO:0005575 cellular_component No
GO:0031090 organelle membrane No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.999716

Transmembrane Domains

Domain # Start End Length
1 169 191 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup1218
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 112.32 Ani_SJS6_1|g4756.t1
Aspergillus niger CBS 113.50 Ani_SJS3_1|g5970.t1
Aspergillus niger CBS 115988 Ani_SJS16_1|g8181.t1
Aspergillus niger CBS 115989 Ani_SJS83_1|g6063.t1
Aspergillus niger CBS 118.52 Ani_SJS14_1|g4383.t1
Aspergillus niger CBS 124.48 Ani_SJS7_1|g10761.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g1607.t1
Aspergillus niger CBS 133816 Ani_SJS71_1|g9432.t1
Aspergillus niger CBS 147320 Ani_SJS28_1|g1805.t1
Aspergillus niger CBS 147321 Ani_SJS30_1|g9661.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g8383.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g4695.t1
Aspergillus niger CBS 147324 Ani_SJS39_1|g10841.t1
Aspergillus niger CBS 147343 Ani_SJS115_1|g10165.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g9486.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g7741.t1 (this protein)
Aspergillus niger CBS 147346 Ani_SJS75_1|g9679.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g9606.t1
Aspergillus niger CBS 147352 Ani_SJS95_1|g3343.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g10996.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g9380.t1
Aspergillus niger CBS 147482 Ani_SJS55_1|g10622.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g9534.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g10354.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g7741.t1
MGRFGFLSLALLSVQALIGGSLAADAAEKEDLPETQLLSVTAHASFPASEIFGVKLVNGYPTEALITFANEEESP
VTVNFIGGSLSAVEGESSQIVRNLTAHRYSVEIPAGQQESVSYSFATEMHPQDLLLTLASVISDTDGNLFTLYAY
NGTVSVVEPETSIFDPQILFLYFFLLACFSGVVYFFYTVWIAPYFPQKRRAGKGPEYKKSAGASKKEAPVEAPSS
PAVSSATTYNAEWIPAHHINRPEARKVKGSAKAKNRA*
Coding >Ani_SJS72_1|g7741.t1
ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGAT
GCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAG
ATCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCC
GTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACT
GCGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCAC
CCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTAC
AACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCCTGTACTTCTTCCTC
CTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGC
GCTGGAAAGGGCCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGC
CCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGG
AAGGTCAAGGGTAGCGCCAAGGCTAAGAACCGTGCCTAA
Transcript >Ani_SJS72_1|g7741.t1
ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGAT
GCTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAG
ATCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCC
GTGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACT
GCGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCAC
CCCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTAC
AACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATCCTCTTCCTGTACTTCTTCCTC
CTGGCTTGCTTCTCTGGCGTCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGC
GCTGGAAAGGGCCCCGAGTACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGC
CCTGCTGTCTCGTCTGCCACTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGG
AAGGTCAAGGGTAGCGCCAAGGCTAAGAACCGTGCCTAA
Gene >Ani_SJS72_1|g7741.t1
ATGGGTCGCTTTGGTTTCTTGTCCCTGGCTCTCCTTTCTGTCCAGGCCTTGATTGGCGGCAGTCTCGCGGCGGTA
CGTTCCCTCTCGCGTGACTCCCATCGTCCCACTGTCAATTGAGTTGCTGACGCGATGTCGCATGTTACTAGGATG
CTGCTGAGAAGGAGGATCTCCCTGAAACCCAATTGCTTTCTGTCACGGCCCACGCCTCCTTCCCTGCCTCCGAGA
TCTTTGGTGTCAAGCTTGTCAATGGCTACCCGACCGAGGCGCTGATCACTTTCGCCAATGAGGAGGAATCTCCCG
TGACTGTGAACTTCATTGGTGGTTCCTTGTCGGCAGTTGAAGGAGAAAGCAGCCAGATTGTTCGCAACCTGACTG
CGCACCGTTACAGCGTTGAGATCCCGGCCGGTCAGCAGGAGAGCGTCAGCTACAGCTTCGCCACCGAAATGCACC
CCCAGGATTTGCTGCTCACCCTCGCTTCCGTCATCTCTGATACCGATGGCAACCTCTTCACTCTCTACGCCTACA
ACGGCACTGTCAGCGTTGTTGAGCCGGAGACCAGCATCTTTGACCCTCAGATGTAAGGCACTTTTCTCACAGCTC
GCCGATAAGGCCAAGCTAACCCTATTGTTATTAGCCTCTTCCTGTACTTCTTCCTCCTGGCTTGCTTCTCTGGCG
TCGTCTACTTCTTCTACACCGTCTGGATCGCTCCCTACTTCCCCCAGAAGCGCCGCGCTGGAAAGGGCCCCGAGT
ACAAGAAGTCCGCTGGTGCCTCCAAGAAGGAGGCCCCCGTTGAGGCTCCCAGCAGCCCTGCTGTCTCGTCTGCCA
CTACCTACAACGCCGAGTGGATCCCCGCTCACCACATCAACCGTCCTGAGGCCAGGAAGGTCAAGGGTAGCGCCA
AGGCTAAGAACCGTGCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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