© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7703.t1 |
| Gene name | |
| Location | scaffold_064:187271..189104 |
| Strand | + |
| Gene length (bp) | 1833 |
| Transcript length (bp) | 1719 |
| Coding sequence length (bp) | 1719 |
| Protein length (aa) | 573 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 2.9E-53 | 9 | 305 |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 3.5E-33 | 419 | 553 |
| PF05834 | Lycopene_cycl | Lycopene cyclase protein | 1.3E-06 | 11 | 43 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.3E-04 | 12 | 43 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7703.t1 MASTDQTWEFVVVGGGPAGCALASRLARSARRPQVLLLEAGPRNDDPSLRVDGQRWQTFMNGNLNWGYKTTPQEH CNGRQIDYSRGKVLGGSSAINFGVYTVGARDDYNQWAGLVGDDLFRWERMQTRFRQLETFNGAIVDPKNSKYAAP RTSDHGSQGSLKVGYAAEWEQDLPLMMDVFEQAGLARNPDHNSGDPIGMALVINSSHQGRRVTATDLLDEAPSNL TIITETPALRLVLQGTKTVGVETKGAKYFASKEVILTTGSLDTPKILMHSGLGPAGQLQQFGIPVVKDMPAVGQG LRDHFFAPLCFQRNPTTNDRDAFFGNPAAMESALEQWSKDGTGPWARHSCQIGAGWLKSDRLVASEEFKALPPTV QEFLQRDTVPHYEFMTHFPLHLISPEPFIDYSYVCMLVFLMNEQSSGEVRLQSANPEDPLLFDPKFLSHPFDRRA CIEIYRHALEVTKHESFQKDTVSALIAPPSESDEDILEFWKNTLGSSWHMTGTTKMGKSGDADAVVDSRFRVFGV ENLRIADMGVVPVLTNNHTQATAYVTGLTCGDALAEEYGLDTSEARL* |
| Coding | >Ani_SJS72_1|g7703.t1 ATGGCCTCGACTGATCAGACGTGGGAATTCGTCGTTGTGGGTGGTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGG CTTGCTCGGTCAGCGCGACGGCCTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAACGATGATCCATCACTGCGT GTGGACGGCCAACGATGGCAGACCTTTATGAATGGAAACCTGAACTGGGGGTACAAGACCACCCCACAAGAACAC TGTAATGGCCGACAGATCGACTATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGCCATCAACTTCGGTGTCTAC ACCGTGGGTGCGCGAGACGACTATAACCAATGGGCTGGGCTTGTTGGTGATGACCTGTTTCGCTGGGAGCGCATG CAGACTCGATTCAGACAGCTGGAAACATTTAACGGTGCCATTGTGGACCCGAAGAATAGCAAATATGCAGCCCCG AGGACCTCAGACCATGGCTCCCAAGGGAGTCTGAAGGTCGGCTATGCTGCTGAATGGGAGCAGGATCTTCCCTTG ATGATGGATGTCTTCGAGCAGGCTGGCCTGGCTCGGAACCCTGACCACAACTCGGGAGACCCGATTGGCATGGCG TTGGTCATTAATTCATCCCACCAGGGTCGAAGAGTGACAGCAACTGATCTTTTGGACGAAGCCCCGTCCAATTTG ACTATCATAACGGAGACGCCAGCGCTCAGGCTCGTACTCCAAGGCACCAAGACTGTTGGTGTGGAAACCAAGGGG GCAAAATACTTCGCATCCAAAGAAGTGATTCTAACAACCGGATCACTGGACACGCCCAAGATTCTGATGCATTCG GGACTTGGACCAGCGGGACAACTACAACAATTCGGGATCCCCGTCGTCAAGGACATGCCTGCGGTAGGCCAGGGT CTTCGGGACCACTTTTTCGCACCGCTGTGCTTCCAACGAAACCCGACAACAAACGATCGCGATGCCTTCTTCGGT AACCCGGCTGCTATGGAGTCAGCTCTGGAACAATGGAGCAAAGATGGCACCGGGCCGTGGGCGCGGCACTCGTGC CAGATTGGCGCCGGCTGGCTCAAGTCCGACCGCTTGGTGGCATCTGAGGAATTCAAAGCACTGCCTCCGACAGTG CAGGAATTCCTACAACGCGACACGGTGCCACACTACGAGTTCATGACACACTTCCCGCTGCATCTCATCTCTCCC GAGCCTTTCATAGATTACAGCTACGTTTGCATGCTCGTGTTTTTGATGAACGAGCAATCCAGCGGTGAAGTGCGT CTGCAGTCAGCCAACCCTGAAGACCCGCTGCTGTTTGATCCAAAGTTCTTGTCCCACCCGTTTGACAGGCGCGCA TGTATTGAGATCTATCGGCACGCGCTGGAGGTGACGAAGCATGAATCTTTCCAAAAAGACACCGTGTCCGCATTG ATTGCGCCCCCGTCCGAGTCGGATGAGGATATTCTTGAGTTCTGGAAGAACACCCTCGGATCCAGTTGGCACATG ACTGGAACGACCAAGATGGGTAAGTCCGGGGATGCCGATGCTGTCGTGGACAGCCGGTTCCGGGTATTTGGTGTC GAGAATCTGCGGATCGCCGACATGGGTGTGGTGCCTGTTTTGACGAACAACCACACACAGGCAACTGCGTATGTC ACCGGTTTGACATGTGGAGATGCGCTGGCAGAGGAATATGGGCTTGATACTTCGGAGGCTCGATTGTAG |
| Transcript | >Ani_SJS72_1|g7703.t1 ATGGCCTCGACTGATCAGACGTGGGAATTCGTCGTTGTGGGTGGTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGG CTTGCTCGGTCAGCGCGACGGCCTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAACGATGATCCATCACTGCGT GTGGACGGCCAACGATGGCAGACCTTTATGAATGGAAACCTGAACTGGGGGTACAAGACCACCCCACAAGAACAC TGTAATGGCCGACAGATCGACTATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGCCATCAACTTCGGTGTCTAC ACCGTGGGTGCGCGAGACGACTATAACCAATGGGCTGGGCTTGTTGGTGATGACCTGTTTCGCTGGGAGCGCATG CAGACTCGATTCAGACAGCTGGAAACATTTAACGGTGCCATTGTGGACCCGAAGAATAGCAAATATGCAGCCCCG AGGACCTCAGACCATGGCTCCCAAGGGAGTCTGAAGGTCGGCTATGCTGCTGAATGGGAGCAGGATCTTCCCTTG ATGATGGATGTCTTCGAGCAGGCTGGCCTGGCTCGGAACCCTGACCACAACTCGGGAGACCCGATTGGCATGGCG TTGGTCATTAATTCATCCCACCAGGGTCGAAGAGTGACAGCAACTGATCTTTTGGACGAAGCCCCGTCCAATTTG ACTATCATAACGGAGACGCCAGCGCTCAGGCTCGTACTCCAAGGCACCAAGACTGTTGGTGTGGAAACCAAGGGG GCAAAATACTTCGCATCCAAAGAAGTGATTCTAACAACCGGATCACTGGACACGCCCAAGATTCTGATGCATTCG GGACTTGGACCAGCGGGACAACTACAACAATTCGGGATCCCCGTCGTCAAGGACATGCCTGCGGTAGGCCAGGGT CTTCGGGACCACTTTTTCGCACCGCTGTGCTTCCAACGAAACCCGACAACAAACGATCGCGATGCCTTCTTCGGT AACCCGGCTGCTATGGAGTCAGCTCTGGAACAATGGAGCAAAGATGGCACCGGGCCGTGGGCGCGGCACTCGTGC CAGATTGGCGCCGGCTGGCTCAAGTCCGACCGCTTGGTGGCATCTGAGGAATTCAAAGCACTGCCTCCGACAGTG CAGGAATTCCTACAACGCGACACGGTGCCACACTACGAGTTCATGACACACTTCCCGCTGCATCTCATCTCTCCC GAGCCTTTCATAGATTACAGCTACGTTTGCATGCTCGTGTTTTTGATGAACGAGCAATCCAGCGGTGAAGTGCGT CTGCAGTCAGCCAACCCTGAAGACCCGCTGCTGTTTGATCCAAAGTTCTTGTCCCACCCGTTTGACAGGCGCGCA TGTATTGAGATCTATCGGCACGCGCTGGAGGTGACGAAGCATGAATCTTTCCAAAAAGACACCGTGTCCGCATTG ATTGCGCCCCCGTCCGAGTCGGATGAGGATATTCTTGAGTTCTGGAAGAACACCCTCGGATCCAGTTGGCACATG ACTGGAACGACCAAGATGGGTAAGTCCGGGGATGCCGATGCTGTCGTGGACAGCCGGTTCCGGGTATTTGGTGTC GAGAATCTGCGGATCGCCGACATGGGTGTGGTGCCTGTTTTGACGAACAACCACACACAGGCAACTGCGTATGTC ACCGGTTTGACATGTGGAGATGCGCTGGCAGAGGAATATGGGCTTGATACTTCGGAGGCTCGATTGTAG |
| Gene | >Ani_SJS72_1|g7703.t1 ATGGCCTCGACTGATCAGACGTGGGAATTCGTCGTTGTGGGTGGTTAGTATGGAAGTCTCGTTCGTCGATCAGGA CCTCACCTAACGATGCTATAGGTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGGCTTGCTCGGTCAGCGCGACGGC CTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAACGATGATCCATCACTGCGTGTGGACGGCCAACGATGGCAGA CCTTTATGAATGGAAACCTGAACTGGGGGTACAAGACCACCCCACAAGAACACTGTAATGGCCGACAGATCGACT ATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGCCATCAACTTCGGTGTCTACACCGTGGGTGCGCGAGACGACT ATAACCAATGGGCTGGGCTTGTTGGTGATGACCTGTTTCGCTGGGAGCGCATGCAGACTCGATTCAGACAGCTGG AAACATTTAACGGTGCCATTGTGGACCCGAAGAATAGCAAATATGCAGCCCCGAGGACCTCAGACCATGGCTCCC AAGGGAGTCTGAAGGTCGGCTATGCTGCTGAATGGGAGCAGGATCTTCCCTTGATGATGGATGTCTTCGAGCAGG CTGGCCTGGCTCGGAACCCTGACCACAACTCGGGAGACCCGATTGGCATGGCGTTGGTCATTAATTCATCCCACC AGGGTCGAAGAGTGACAGCAACTGATCTTTTGGACGAAGCCCCGTCCAATTTGACTATCATAACGGAGACGCCAG CGCTCAGGCTCGTACTCCAAGGCACCAAGACTGTTGGTGTGGAAACCAAGGGGGCAAAATGTATGTAATCGAGCT ATTTTTCGAGCTGAACCGTTCAACTAACCATGGCTTGTCGCTGCAGACTTCGCATCCAAAGAAGTGATTCTAACA ACCGGATCACTGGACACGCCCAAGATTCTGATGCATTCGGGACTTGGACCAGCGGGACAACTACAACAATTCGGG ATCCCCGTCGTCAAGGACATGCCTGCGGTAGGCCAGGGTCTTCGGGACCACTTTTTCGCACCGCTGTGCTTCCAA CGAAACCCGACAACAAACGATCGCGATGCCTTCTTCGGTAACCCGGCTGCTATGGAGTCAGCTCTGGAACAATGG AGCAAAGATGGCACCGGGCCGTGGGCGCGGCACTCGTGCCAGATTGGCGCCGGCTGGCTCAAGTCCGACCGCTTG GTGGCATCTGAGGAATTCAAAGCACTGCCTCCGACAGTGCAGGAATTCCTACAACGCGACACGGTGCCACACTAC GAGTTCATGACACACTTCCCGCTGCATCTCATCTCTCCCGAGCCTTTCATAGATTACAGCTACGTTTGCATGCTC GTGTTTTTGATGAACGAGCAATCCAGCGGTGAAGTGCGTCTGCAGTCAGCCAACCCTGAAGACCCGCTGCTGTTT GATCCAAAGTTCTTGTCCCACCCGTTTGACAGGCGCGCATGTATTGAGATCTATCGGCACGCGCTGGAGGTGACG AAGCATGAATCTTTCCAAAAAGACACCGTGTCCGCATTGATTGCGCCCCCGTCCGAGTCGGATGAGGATATTCTT GAGTTCTGGAAGAACACCCTCGGATCCAGTTGGCACATGACTGGAACGACCAAGATGGGTAAGTCCGGGGATGCC GATGCTGTCGTGGACAGCCGGTTCCGGGTATTTGGTGTCGAGAATCTGCGGATCGCCGACATGGGTGTGGTGCCT GTTTTGACGAACAACCACACACAGGCAACTGCGTATGTCACCGGTTTGACATGTGGAGATGCGCTGGCAGAGGAA TATGGGCTTGATACTTCGGAGGCTCGATTGTAG |