© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7688.t1 |
| Gene name | |
| Location | scaffold_064:136650..137281 |
| Strand | + |
| Gene length (bp) | 631 |
| Transcript length (bp) | 507 |
| Coding sequence length (bp) | 507 |
| Protein length (aa) | 169 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01284 | MARVEL | Membrane-associating domain | 6.4E-19 | 11 | 133 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 33 | 21 |
| 2 | 43 | 65 | 22 |
| 3 | 72 | 91 | 19 |
| 4 | 119 | 141 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7688.t1 MFSSTVARPLQLVTRFMQWASAVIVMGITSYFIHKGPRGQHTIYWEVISTMSVVFFLPAFISPFMPNALSKFVLI IDVIFSYLWLTAFIFAAQDYNWHNCGANSPPGLSCSKKKANEAFIFLTFIFTFFAIFLEVGALWAYRRESTPVRE KNTGGAHGGPADAPVATA* |
| Coding | >Ani_SJS72_1|g7688.t1 ATGTTCTCCAGTACTGTGGCCCGTCCACTACAGCTGGTCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCGTG ATGGGTATCACCTCCTACTTCATCCACAAGGGACCTCGCGGCCAGCACACCATCTACTGGGAAGTCATTTCGACC ATGTCTGTTGTCTTCTTCCTGCCCGCCTTTATCTCGCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATC ATCGATGTCATCTTCTCGTACCTCTGGCTCACGGCTTTCATCTTTGCCGCGCAAGATTACAACTGGCACAACTGC GGCGCCAACTCTCCCCCCGGCCTATCCTGCTCCAAGAAGAAGGCCAATGAAGCCTTCATCTTCCTGACCTTCATC TTCACCTTCTTCGCCATCTTCCTCGAAGTCGGTGCCCTCTGGGCCTACCGTCGCGAGAGCACCCCAGTCCGGGAG AAGAACACCGGTGGCGCCCACGGCGGTCCTGCTGACGCGCCTGTGGCCACAGCCTAG |
| Transcript | >Ani_SJS72_1|g7688.t1 ATGTTCTCCAGTACTGTGGCCCGTCCACTACAGCTGGTCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCGTG ATGGGTATCACCTCCTACTTCATCCACAAGGGACCTCGCGGCCAGCACACCATCTACTGGGAAGTCATTTCGACC ATGTCTGTTGTCTTCTTCCTGCCCGCCTTTATCTCGCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATC ATCGATGTCATCTTCTCGTACCTCTGGCTCACGGCTTTCATCTTTGCCGCGCAAGATTACAACTGGCACAACTGC GGCGCCAACTCTCCCCCCGGCCTATCCTGCTCCAAGAAGAAGGCCAATGAAGCCTTCATCTTCCTGACCTTCATC TTCACCTTCTTCGCCATCTTCCTCGAAGTCGGTGCCCTCTGGGCCTACCGTCGCGAGAGCACCCCAGTCCGGGAG AAGAACACCGGTGGCGCCCACGGCGGTCCTGCTGACGCGCCTGTGGCCACAGCCTAG |
| Gene | >Ani_SJS72_1|g7688.t1 ATGTTCTCCAGTACTGTGGCCCGTCCACTACAGCTGGTCACTCGGTTCATGCAGTGGGCCAGTGCAGTCATCGTG ATGGGTATCACCTCCTACTTCATCCACAAGGGACCTCGCGGCCAGCACACCATCTACTGGGAAGTCATTGTAAGC ATGCTCCCATCCTTGATGTAAACAGATCAAACCTTATCAACTAACCATGGATTAGTCGACCATGTCTGTTGTCTT CTTCCTGCCCGCCTTTATCTCGCCGTTCATGCCCAATGCCCTGAGCAAGTTTGTCTTGATCATCGATGTCATCTT CTCGTACCTGTATGTGCCATCCAATCAAGCAGCATCTATATCCTTCTGTGCTGATACTGACCATGACCACAGCTG GCTCACGGCTTTCATCTTTGCCGCGCAAGATTACAACTGGCACAACTGCGGCGCCAACTCTCCCCCCGGCCTATC CTGCTCCAAGAAGAAGGCCAATGAAGCCTTCATCTTCCTGACCTTCATCTTCACCTTCTTCGCCATCTTCCTCGA AGTCGGTGCCCTCTGGGCCTACCGTCGCGAGAGCACCCCAGTCCGGGAGAAGAACACCGGTGGCGCCCACGGCGG TCCTGCTGACGCGCCTGTGGCCACAGCCTAG |