Protein ID | Ani_SJS72_1|g7637.t1 |
Gene name | |
Location | scaffold_063:192241..194046 |
Strand | - |
Gene length (bp) | 1805 |
Transcript length (bp) | 1635 |
Coding sequence length (bp) | 1635 |
Protein length (aa) | 545 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 2.3E-23 | 25 | 88 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 6.4E-08 | 312 | 336 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 1.3E-03 | 507 | 526 |
PF12171 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding | 7.4E-09 | 312 | 336 |
PF12756 | zf-C2H2_2 | C2H2 type zinc-finger (2 copies) | 4.1E-04 | 309 | 347 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 3 |
Orthogroup | 7709 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g7637.t1 MGQFQSSTSEENASSSARSSDKKLDYYELLQVNWDASAEEIKKAYRRKALELHPDRNYGNVESATKLFAEIQSAY EVLSDPQERSWYDTHRDVLLGSQGSSGNSGTPYSSRTTTADDVYRIFSRFSPQMEFSDASDGFYGGLREAFSRLA MEEEIACRGENMEFIAYPTFGCRGDDFEKVVRPFYVAWGGFSTKKSFAWKDVYRYSEAPDRRVRRLMEKENKRLR DEGIREFNDAVRSLVAFVKKRDPRYKTSTQSESQRQEFLRQSAASQAAKSRAANQARLRDHVTQDWAKSEEFEDD ETVSTETELEFFECVVCRKSFKSLNQFEAHERSKKHVKAIRQLQKEMRNENKQLGLAGDSSEYEAQTAMTFIPDY QAMPVSDAESTPCRSTSGNTLPGNNDNEGRIPAPEIAGEIHSERVSHESLRGYVDQTSESEIDYASREVVEGRLQ LTGDSTQDTTNAAASLSSDFTHLELDPSKPAVQKLGKAKQKRIKKAEQAKGQSLGPRCTTCNASFPSRTQLFSHL KESDHAQVQEVTRHRKRRA* |
Coding | >Ani_SJS72_1|g7637.t1 ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGCTAGATCATCCGATAAGAAACTTGAT TATTACGAACTTTTACAGGTGAATTGGGACGCATCTGCAGAGGAAATTAAAAAGGCGTACAGAAGAAAAGCCCTT GAGTTGCACCCGGACCGAAACTATGGAAATGTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCTGCTTAC GAAGTGCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCTTGTTAGGAAGCCAGGGCAGT TCTGGCAACTCGGGAACTCCATATAGTTCGCGCACGACTACTGCAGACGATGTCTATAGGATCTTTTCTAGGTTC AGTCCACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTGAGGCCTTCTCACGACTTGCC ATGGAGGAAGAGATCGCTTGCCGTGGGGAAAATATGGAATTTATTGCCTATCCTACGTTCGGGTGCCGGGGAGAC GATTTTGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAAAGAAGTCTTTTGCATGGAAA GATGTCTATCGTTACTCAGAAGCTCCAGACCGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGTCTGAGG GACGAAGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCAAAAAGCGCGACCCGCGATAC AAGACAAGCACTCAAAGTGAATCACAGCGCCAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCCAAATCA CGGGCTGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGTCAGAGGAATTTGAAGATGAC GAGACAGTGAGTACCGAGACAGAACTGGAATTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGTTTGAAT CAGTTTGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTCAAAAGGAAATGAGGAATGAA AACAAGCAACTAGGACTAGCGGGAGATTCATCAGAGTATGAAGCCCAGACTGCCATGACATTCATCCCCGATTAT CAGGCTATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAAACACTCTCCCCGGCAATAAT GATAATGAGGGTCGCATACCGGCACCGGAAATTGCCGGTGAGATCCACAGTGAACGCGTATCTCACGAAAGCCTA CGGGGCTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAGTTGTCGAAGGTCGACTCCAA CTGACCGGTGATTCAACACAGGATACGACAAATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTAGAGCTT GATCCCTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAAAAAAAGCTGAACAGGCAAAA GGACAGTCCTTAGGCCCGCGGTGTACAACATGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCACATCTT AAAGAGTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAGCTTAA |
Transcript | >Ani_SJS72_1|g7637.t1 ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGCTAGATCATCCGATAAGAAACTTGAT TATTACGAACTTTTACAGGTGAATTGGGACGCATCTGCAGAGGAAATTAAAAAGGCGTACAGAAGAAAAGCCCTT GAGTTGCACCCGGACCGAAACTATGGAAATGTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCTGCTTAC GAAGTGCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCTTGTTAGGAAGCCAGGGCAGT TCTGGCAACTCGGGAACTCCATATAGTTCGCGCACGACTACTGCAGACGATGTCTATAGGATCTTTTCTAGGTTC AGTCCACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTGAGGCCTTCTCACGACTTGCC ATGGAGGAAGAGATCGCTTGCCGTGGGGAAAATATGGAATTTATTGCCTATCCTACGTTCGGGTGCCGGGGAGAC GATTTTGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAAAGAAGTCTTTTGCATGGAAA GATGTCTATCGTTACTCAGAAGCTCCAGACCGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGTCTGAGG GACGAAGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCAAAAAGCGCGACCCGCGATAC AAGACAAGCACTCAAAGTGAATCACAGCGCCAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCCAAATCA CGGGCTGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGTCAGAGGAATTTGAAGATGAC GAGACAGTGAGTACCGAGACAGAACTGGAATTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGTTTGAAT CAGTTTGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTCAAAAGGAAATGAGGAATGAA AACAAGCAACTAGGACTAGCGGGAGATTCATCAGAGTATGAAGCCCAGACTGCCATGACATTCATCCCCGATTAT CAGGCTATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAAACACTCTCCCCGGCAATAAT GATAATGAGGGTCGCATACCGGCACCGGAAATTGCCGGTGAGATCCACAGTGAACGCGTATCTCACGAAAGCCTA CGGGGCTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAGTTGTCGAAGGTCGACTCCAA CTGACCGGTGATTCAACACAGGATACGACAAATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTAGAGCTT GATCCCTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAAAAAAAGCTGAACAGGCAAAA GGACAGTCCTTAGGCCCGCGGTGTACAACATGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCACATCTT AAAGAGTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAGCTTAA |
Gene | >Ani_SJS72_1|g7637.t1 ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGCTAGATCATCCGATAAGAAACTTGAT TATTACGAACTTTTACAGGTGAATTGGGACGCATCTGCAGAGGAGTAAGCTTGCCTTGCCTTTCGGTTTTCCTAA ATCTTGCGCATGAATTTTTTCTTGGGAATAGGGCACGCAGAATGGGGAAGGGAATATGAAAGCGGGCCTCGAAGG GGAGACTTGGTGGGATGAGCAGCAAAGGTATCCTGAAGCCACTAACACCCCATACTCCCTTTAGAATTAAAAAGG CGTACAGAAGAAAAGCCCTTGAGTTGCACCCGGACCGAAACTATGGAAATGTGGAATCTGCTACAAAGCTTTTTG CAGAGATTCAGTCTGCTTACGAAGTGCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCT TGTTAGGAAGCCAGGGCAGTTCTGGCAACTCGGGAACTCCATATAGTTCGCGCACGACTACTGCAGACGATGTCT ATAGGATCTTTTCTAGGTTCAGTCCACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTG AGGCCTTCTCACGACTTGCCATGGAGGAAGAGATCGCTTGCCGTGGGGAAAATATGGAATTTATTGCCTATCCTA CGTTCGGGTGCCGGGGAGACGATTTTGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAA AGAAGTCTTTTGCATGGAAAGATGTCTATCGTTACTCAGAAGCTCCAGACCGTCGTGTTCGTAGACTGATGGAGA AGGAAAATAAGCGTCTGAGGGACGAAGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCA AAAAGCGCGACCCGCGATACAAGACAAGCACTCAAAGTGAATCACAGCGCCAGGAATTCCTCCGACAATCTGCTG CCTCCCAAGCTGCCAAATCACGGGCTGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGT CAGAGGAATTTGAAGATGACGAGACAGTGAGTACCGAGACAGAACTGGAATTTTTCGAATGTGTTGTGTGCCGCA AAAGTTTCAAGAGTTTGAATCAGTTTGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTC AAAAGGAAATGAGGAATGAAAACAAGCAACTAGGACTAGCGGGAGATTCATCAGAGTATGAAGCCCAGACTGCCA TGACATTCATCCCCGATTATCAGGCTATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAA ACACTCTCCCCGGCAATAATGATAATGAGGGTCGCATACCGGCACCGGAAATTGCCGGTGAGATCCACAGTGAAC GCGTATCTCACGAAAGCCTACGGGGCTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAG TTGTCGAAGGTCGACTCCAACTGACCGGTGATTCAACACAGGATACGACAAATGCGGCGGCTAGTCTGTCTTCGG ATTTTACGCATCTAGAGCTTGATCCCTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAA AAAAAGCTGAACAGGCAAAAGGACAGTCCTTAGGCCCGCGGTGTACAACATGCAACGCTTCCTTTCCTTCACGGA CCCAGCTTTTTTCACATCTTAAAGAGTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAG CTTAA |