© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g759.t1 |
| Gene name | |
| Location | scaffold_003:601348..602768 |
| Strand | + |
| Gene length (bp) | 1420 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06027 | SLC35F | Solute carrier family 35 | 3.2E-90 | 63 | 361 |
| PF08627 | CRT-like | CRT-like, chloroquine-resistance transporter-like | 8.5E-09 | 133 | 218 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 98 | 120 | 22 |
| 3 | 133 | 155 | 22 |
| 4 | 165 | 184 | 19 |
| 5 | 191 | 213 | 22 |
| 6 | 223 | 240 | 17 |
| 7 | 252 | 274 | 22 |
| 8 | 289 | 311 | 22 |
| 9 | 318 | 340 | 22 |
| 10 | 344 | 363 | 19 |
| Orthofinder run ID | 3 |
| Orthogroup | 6977 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g759.t1 MSDTKARLAAQRSSPLPASYIPVAQSPEQVAPTLEAPQSGDTLPEVPATHVEKQDNVLAYLATKEFYITLFLGQV LAITNTACSTFSTLLVSEGTSIPAFQTFFNYFLLNAIFTPYTIYCYGLKGWTRVVLQHGWKYIILAFCDVEGNYF IVLAYRHTTMLSAQLINFWAIAVVLIVSFTILRVRYHITQVLGIMICIGGMGFLIASDRITGADDGNYSRADLIK GDLFALLGATFYGLANTGEEVFVSTAPVYEVLGQMAMYGMVINGVQAGVFDRNSFHNAIWNFQVGIYLTGYTLCL ASFYCMVPLLFRLSSAAFFNISMLTMNFWGVLIGVGVFHYTIHWMYPIAFALIILGQLIYYLGRRVLGEARKPWL GRNQECGVSGLFTARRKIETAAGRSRSDSISTACSERDPMLPHASVAEEAA* |
| Coding | >Ani_SJS72_1|g759.t1 ATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAA TCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCAT GTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTACCCTTTTCCTCGGACAGGTT CTGGCTATCACCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGCTTTT CAGACATTCTTCAACTACTTTCTGCTCAATGCTATCTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGC TGGACACGGGTAGTGCTTCAGCACGGTTGGAAATATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTC ATTGTGCTGGCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGCTC ATTGTGTCCTTCACAATCTTGCGCGTGCGTTACCATATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGC ATGGGCTTCCTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCAAA GGCGACCTCTTCGCACTTTTGGGCGCGACATTCTACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACG GCCCCGGTATACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTTTC GACCGCAACTCGTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTT GCTTCCTTCTATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGACG ATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACAATCCACTGGATGTACCCGATTGCTTTC GCGCTCATTATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGCTG GGACGGAACCAAGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGT CGCAGCGACTCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAGCA GCTTAG |
| Transcript | >Ani_SJS72_1|g759.t1 ATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAA TCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCAT GTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTACCCTTTTCCTCGGACAGGTT CTGGCTATCACCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGCTTTT CAGACATTCTTCAACTACTTTCTGCTCAATGCTATCTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGC TGGACACGGGTAGTGCTTCAGCACGGTTGGAAATATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTC ATTGTGCTGGCCTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGCTC ATTGTGTCCTTCACAATCTTGCGCGTGCGTTACCATATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGC ATGGGCTTCCTGATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCAAA GGCGACCTCTTCGCACTTTTGGGCGCGACATTCTACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACG GCCCCGGTATACGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTTTC GACCGCAACTCGTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTT GCTTCCTTCTATTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGACG ATGAACTTCTGGGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACAATCCACTGGATGTACCCGATTGCTTTC GCGCTCATTATCCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGCTG GGACGGAACCAAGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGT CGCAGCGACTCCATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAGCA GCTTAG |
| Gene | >Ani_SJS72_1|g759.t1 ATGTCCGATACCAAGGCTCGGCTTGCCGCTCAGAGATCCTCTCCACTCCCCGCTAGTTACATACCTGTAGCTCAA TCCCCGGAGCAGGTTGCTCCCACATTAGAGGCTCCTCAGAGCGGAGACACCCTACCAGAAGTGCCTGCCACGCAT GTCGAAAAACAAGACAACGTCCTTGCATACCTCGCGACAAAAGAGTTCTACATTACCCTTTTCCTCGGGTGAGTT ATACAGTTGGAAACGCTTGAAGCACCAAGGTGTGGTCGATGGTTAACTTGTCACACAGACAGGTTCTGGCTATCA CCAACACTGCCTGTAGCACATTCAGCACACTACTGGTCAGCGAGGGAACCTCAATCCCGGCTTTTCAGACATTCT TCAACTACTTTCTGCTCAATGCTATCTTCACCCCATATACCATATACTGTTATGGCCTGAAAGGCTGGACACGGG TAGTGCTTCAGCACGGTTGGAAATGTAAGCGTCGCTGTATACTATAAGAAGCCCCCTCACCTCCCCACCAAGGCC TCTCTAATTGCGGTCTTGGATAGATATAATTTTGGCCTTCTGCGACGTGGAAGGTAACTATTTCATTGTGCTGGC CTATCGCCATACGACTATGCTGAGCGCCCAGTTGATAAATTTCTGGGCCATTGCGGTCGTGCTCATTGTGTCCTT CACAATCTTGCGCGTGCGTTACCATATCACACAGGTGTTAGGTATTATGATCTGTATTGGCGGCATGGGCTTCCT GATTGCTTCGGACCGGATCACTGGTGCCGATGACGGGAACTATTCGCGCGCCGATTTGATCAAAGGCGACCTCTT CGCACTTTTGGGCGCGACATTCTACGGACTTGCCAACACGGGTGAGGAGGTCTTTGTCAGTACGGCCCCGGTATA CGAAGTTTTGGGCCAAATGGCCATGTACGGCATGGTCATAAATGGCGTCCAGGCGGGCGTTTTCGACCGCAACTC GTTCCATAATGCGATCTGGAACTTCCAGGTTGGTATCTACTTGACAGGATATACGCTGTGTCTTGCTTCCTTCTA TTGTATGGTACCGCTGCTGTTCCGGCTGTCATCGGCGGCATTTTTCAACATATCGATGCTGACGATGAACTTCTG GGGTGTTCTCATCGGGGTCGGGGTGTTTCACTACACAATCCACTGGATGTACCCGATTGCTTTCGCGCTCATTAT CCTCGGGCAGCTCATCTACTATCTGGGGCGGCGCGTGCTGGGAGAAGCGCGCAAACCCTGGCTGGGACGGAACCA AGAATGCGGCGTGTCGGGACTGTTTACAGCACGAAGAAAGATCGAGACCGCTGCCGGCCGGAGTCGCAGCGACTC CATATCCACGGCTTGTTCAGAGCGTGATCCTATGCTACCACATGCCAGTGTGGCTGAGGAAGCAGCTTAG |