© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7548.t1 |
| Gene name | |
| Location | scaffold_062:100167..101993 |
| Strand | + |
| Gene length (bp) | 1826 |
| Transcript length (bp) | 1689 |
| Coding sequence length (bp) | 1689 |
| Protein length (aa) | 563 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 2.6E-06 | 413 | 460 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.1E-07 | 441 | 494 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.0E-09 | 474 | 527 |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.9E-08 | 509 | 559 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 4.1E-16 | 412 | 502 |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.3E-10 | 506 | 559 |
| PF00023 | Ank | Ankyrin repeat | 2.3E-05 | 442 | 469 |
| PF00023 | Ank | Ankyrin repeat | 4.7E-03 | 475 | 502 |
| PF00023 | Ank | Ankyrin repeat | 1.3E-04 | 507 | 537 |
| PF13606 | Ank_3 | Ankyrin repeat | 7.4E-06 | 474 | 501 |
| PF13857 | Ank_5 | Ankyrin repeats (many copies) | 1.2E-08 | 493 | 547 |
| PF01048 | PNP_UDP_1 | Phosphorylase superfamily | 8.9E-07 | 10 | 272 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0005488 | binding | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:1901657 | glycosyl compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 28 | 50 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7548.t1 MLDVEHRRPPDLEVLSDFDTNQYRFGRIGGHNVVLAILQAGVYGITQAALASSMMRRVFPSIQFALMVGIGGGVP SESHDIRLGDVVVSMPVAGYPGVLQYDFGKLGPDGEVTATGALNRPAPKALAAIAAMQADYMMRDSGLMEITSDA LRKHPRIRAKFSHPGMVNDVLYRADYDHVAGNNCRNCSHHMAVFRTPRETTEPNVHYGLIGSGNQVIKNGKFRER LREKHGVLCFETEAAGALEAFRCLVIRGICDYADSHKNDMWQGYAALTAAAYTKDLLLLIEGSVSPESTASTSPS EADIPENINLGLPAHGVNQGATHYPSNPLAQSPQVYQQPINSEPPPRYTPSAHSFQHPSIPVMQHPQQPEKTDSE KKHAEQNTSPPRPFVSQSSQPPNHSRVRKYYGRMVIEAAKAGNMPVVKKFLEKGGDPNTTTDDWDLTALHYAAMG SHNGLTQLLLRAGANPNARAKYTNNTPLFEAASSGHRKVIQYLLRHGADVEVHCQRGKTALHAAAEKGHVACVEL LVQSKADPDSIDEDGHTPLDLAKKEDHLEIVKYLQRI* |
| Coding | >Ani_SJS72_1|g7548.t1 ATGCTGGACGTGGAACATCGGAGGCCACCTGATCTGGAAGTTCTATCAGACTTTGATACCAATCAGTATCGCTTT GGCCGGATTGGGGGTCATAATGTCGTACTGGCCATCTTACAGGCCGGTGTGTACGGAATTACTCAGGCAGCCCTT GCATCAAGTATGATGAGACGCGTCTTTCCATCCATACAGTTCGCTTTGATGGTGGGCATCGGAGGTGGTGTGCCA AGCGAGTCCCATGACATTCGCTTAGGAGATGTGGTGGTCAGCATGCCGGTTGCAGGATACCCTGGAGTGCTGCAG TACGATTTCGGCAAGTTAGGACCGGACGGCGAGGTGACTGCAACTGGCGCCCTTAACAGGCCGGCACCTAAAGCC TTAGCAGCCATTGCCGCCATGCAGGCAGACTATATGATGAGGGACAGTGGTCTGATGGAGATCACTAGCGACGCT CTGAGAAAGCACCCCAGGATACGTGCAAAGTTTTCTCATCCAGGAATGGTGAACGATGTGCTATACCGTGCTGAT TACGACCATGTCGCTGGCAATAATTGCAGAAACTGCAGTCACCACATGGCCGTGTTTCGGACGCCACGGGAAACG ACAGAACCAAATGTTCACTACGGGCTTATTGGATCGGGAAATCAAGTCATTAAGAATGGGAAATTTAGGGAACGT CTGAGGGAGAAGCACGGCGTGCTGTGTTTTGAGACGGAAGCAGCGGGAGCTTTGGAGGCATTCCGCTGTCTTGTC ATTAGGGGAATTTGTGACTATGCAGACTCCCATAAGAACGACATGTGGCAGGGATATGCGGCACTCACGGCAGCT GCATACACAAAAGATCTGTTGCTTCTGATTGAAGGCTCGGTTTCTCCAGAATCCACGGCTTCAACCAGCCCTTCC GAGGCTGATATTCCGGAGAACATCAACTTGGGCTTGCCAGCACACGGGGTCAACCAGGGGGCCACACATTATCCC TCGAACCCTCTAGCTCAAAGTCCGCAGGTTTACCAGCAACCGATAAATTCCGAGCCCCCACCGAGATATACACCG TCGGCACATTCTTTTCAGCACCCATCTATCCCAGTTATGCAGCATCCTCAGCAACCCGAGAAAACTGATTCTGAG AAGAAACATGCAGAGCAGAACACTTCCCCTCCAAGACCGTTTGTCTCTCAGTCATCCCAGCCGCCAAATCACTCC CGTGTGCGAAAATACTACGGAAGAATGGTGATTGAAGCAGCTAAAGCTGGTAACATGCCAGTGGTGAAGAAGTTT CTCGAGAAGGGAGGCGACCCAAATACTACAACCGATGATTGGGACCTTACTGCGCTACATTATGCTGCAATGGGA AGTCACAACGGATTAACACAGCTGCTACTCAGAGCAGGGGCCAATCCTAATGCACGAGCTAAATATACGAACAAC ACTCCCCTGTTTGAAGCAGCTTCCAGCGGTCATAGAAAGGTCATTCAATATTTATTACGCCATGGAGCTGACGTC GAGGTCCATTGTCAGCGGGGTAAGACTGCGTTGCATGCAGCTGCCGAGAAAGGGCATGTTGCGTGTGTCGAGCTT CTGGTGCAGAGCAAGGCCGATCCCGACAGCATTGACGAGGATGGACATACACCTTTGGACTTGGCGAAGAAGGAG GACCATTTAGAGATAGTCAAGTATCTGCAGCGGATATAG |
| Transcript | >Ani_SJS72_1|g7548.t1 ATGCTGGACGTGGAACATCGGAGGCCACCTGATCTGGAAGTTCTATCAGACTTTGATACCAATCAGTATCGCTTT GGCCGGATTGGGGGTCATAATGTCGTACTGGCCATCTTACAGGCCGGTGTGTACGGAATTACTCAGGCAGCCCTT GCATCAAGTATGATGAGACGCGTCTTTCCATCCATACAGTTCGCTTTGATGGTGGGCATCGGAGGTGGTGTGCCA AGCGAGTCCCATGACATTCGCTTAGGAGATGTGGTGGTCAGCATGCCGGTTGCAGGATACCCTGGAGTGCTGCAG TACGATTTCGGCAAGTTAGGACCGGACGGCGAGGTGACTGCAACTGGCGCCCTTAACAGGCCGGCACCTAAAGCC TTAGCAGCCATTGCCGCCATGCAGGCAGACTATATGATGAGGGACAGTGGTCTGATGGAGATCACTAGCGACGCT CTGAGAAAGCACCCCAGGATACGTGCAAAGTTTTCTCATCCAGGAATGGTGAACGATGTGCTATACCGTGCTGAT TACGACCATGTCGCTGGCAATAATTGCAGAAACTGCAGTCACCACATGGCCGTGTTTCGGACGCCACGGGAAACG ACAGAACCAAATGTTCACTACGGGCTTATTGGATCGGGAAATCAAGTCATTAAGAATGGGAAATTTAGGGAACGT CTGAGGGAGAAGCACGGCGTGCTGTGTTTTGAGACGGAAGCAGCGGGAGCTTTGGAGGCATTCCGCTGTCTTGTC ATTAGGGGAATTTGTGACTATGCAGACTCCCATAAGAACGACATGTGGCAGGGATATGCGGCACTCACGGCAGCT GCATACACAAAAGATCTGTTGCTTCTGATTGAAGGCTCGGTTTCTCCAGAATCCACGGCTTCAACCAGCCCTTCC GAGGCTGATATTCCGGAGAACATCAACTTGGGCTTGCCAGCACACGGGGTCAACCAGGGGGCCACACATTATCCC TCGAACCCTCTAGCTCAAAGTCCGCAGGTTTACCAGCAACCGATAAATTCCGAGCCCCCACCGAGATATACACCG TCGGCACATTCTTTTCAGCACCCATCTATCCCAGTTATGCAGCATCCTCAGCAACCCGAGAAAACTGATTCTGAG AAGAAACATGCAGAGCAGAACACTTCCCCTCCAAGACCGTTTGTCTCTCAGTCATCCCAGCCGCCAAATCACTCC CGTGTGCGAAAATACTACGGAAGAATGGTGATTGAAGCAGCTAAAGCTGGTAACATGCCAGTGGTGAAGAAGTTT CTCGAGAAGGGAGGCGACCCAAATACTACAACCGATGATTGGGACCTTACTGCGCTACATTATGCTGCAATGGGA AGTCACAACGGATTAACACAGCTGCTACTCAGAGCAGGGGCCAATCCTAATGCACGAGCTAAATATACGAACAAC ACTCCCCTGTTTGAAGCAGCTTCCAGCGGTCATAGAAAGGTCATTCAATATTTATTACGCCATGGAGCTGACGTC GAGGTCCATTGTCAGCGGGGTAAGACTGCGTTGCATGCAGCTGCCGAGAAAGGGCATGTTGCGTGTGTCGAGCTT CTGGTGCAGAGCAAGGCCGATCCCGACAGCATTGACGAGGATGGACATACACCTTTGGACTTGGCGAAGAAGGAG GACCATTTAGAGATAGTCAAGTATCTGCAGCGGATATAG |
| Gene | >Ani_SJS72_1|g7548.t1 ATGCTGGACGTGGAACATCGGAGGCCACCTGATCTGGAAGTTCTATCAGACTTTGATACCAATCAGTATCGCTTT GGCCGGATTGGGGGTCATAATGTCGTACTGGCCATCTTACAGGCCGGTGTGTACGGAATTACTCAGGCAGCCCTT GCATCAAGTATGATGAGACGCGTCTTTCCATCCATACAGTTCGCTTTGATGGTGGGCATCGGAGGTGGTGTGCCA AGCGAGTCCCATGACATTCGCTTAGGAGATGTGGTGGTCAGCATGCCGGTTGCAGGATACCCTGGAGTGCTGCAG TACGATTTCGGCAAGTTAGGACCGGACGGCGAGGTGACTGCAACTGGCGCCCTTAACAGGCCGGCACCTAAAGCC TTAGCAGCCATTGCCGCCATGCAGGCAGACTATATGATGAGGGACAGTGGTCTGATGGAGATCACTAGCGACGCT CTGAGAAAGCACCCCAGGATACGTGCAAAGTTTTCTCATCCAGGAATGGTGAACGATGTGCTATACCGTGCTGAT TACGACCATGTCGCTGGCAATAATTGCAGAAACTGCAGTCACCACATGGCCGTGTTTCGGACGCCACGGGAAACG ACAGAACCAAATGTTCACTACGGGCTTATTGGATCGGGAAATCAAGTCATTAAGAATGGGAAATTTAGGGAACGT CTGAGGGAGAAGCACGGCGTGCTGTGTTTTGAGACGGAAGCAGCGGGAGCTTTGGTGAGTCGCACGTCTTTCTAC ATTTCTTCCTTGATTTCCTCTTCTTAACTTGTGGTATCAGGAGGCATTCCGCTGTCTTGTCATTAGGGGAATTTG TGACTATGCAGACTCCCATAAGAACGACATGTGGCAGGGATATGCGGCACTCACGGCAGCTGCATACACAAAAGA TCTGTTGCTTCTGATTGAAGGCTCGGTTTCTCCAGAATGTTAGCACCCCATCTACACGCGATTGTGTTTCATGAT TGTTTTCTCCTTCGAGAAAGCTCTAGTAACAATTTTTAGCCACGGCTTCAACCAGCCCTTCCGAGGCTGATATTC CGGAGAACATCAACTTGGGCTTGCCAGCACACGGGGTCAACCAGGGGGCCACACATTATCCCTCGAACCCTCTAG CTCAAAGTCCGCAGGTTTACCAGCAACCGATAAATTCCGAGCCCCCACCGAGATATACACCGTCGGCACATTCTT TTCAGCACCCATCTATCCCAGTTATGCAGCATCCTCAGCAACCCGAGAAAACTGATTCTGAGAAGAAACATGCAG AGCAGAACACTTCCCCTCCAAGACCGTTTGTCTCTCAGTCATCCCAGCCGCCAAATCACTCCCGTGTGCGAAAAT ACTACGGAAGAATGGTGATTGAAGCAGCTAAAGCTGGTAACATGCCAGTGGTGAAGAAGTTTCTCGAGAAGGGAG GCGACCCAAATACTACAACCGATGATTGGGACCTTACTGCGCTACATTATGCTGCAATGGGAAGTCACAACGGAT TAACACAGCTGCTACTCAGAGCAGGGGCCAATCCTAATGCACGAGCTAAATATACGAACAACACTCCCCTGTTTG AAGCAGCTTCCAGCGGTCATAGAAAGGTCATTCAATATTTATTACGCCATGGAGCTGACGTCGAGGTCCATTGTC AGCGGGGTAAGACTGCGTTGCATGCAGCTGCCGAGAAAGGGCATGTTGCGTGTGTCGAGCTTCTGGTGCAGAGCA AGGCCGATCCCGACAGCATTGACGAGGATGGACATACACCTTTGGACTTGGCGAAGAAGGAGGACCATTTAGAGA TAGTCAAGTATCTGCAGCGGATATAG |