Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g7487.t1
Gene name
Location	scaffold_061:143205..143895
Strand	-
Gene length (bp)	690
Transcript length (bp)	525
Coding sequence length (bp)	525
Protein length (aa)	175

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01284	MARVEL	Membrane-associating domain	4.8E-11	15	138

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	13	35	22
2	42	64	22
3	79	101	22
4	125	147	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g7487.t1 MTDYIGHPLGLVGWFARTIQAISSIIVLGITAWAVQENNKTLSVIFSLVIATTSLVVLAVAVGISCLGRRAKWHI IPLLVTDAVISYLWLTSFILLALNFNRRTCRVNRWIGEVSCSRSYTAEAFSFIAFFTTLMGLFLETAYLYWAKPD NVLRTEKRPHQERLSENLNAAGLT*
Coding	>Ani_SJS72_1\|g7487.t1 ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCGAACGATCCAAGCCATCAGCTCGATC ATCGTCCTCGGAATTACAGCCTGGGCTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT GCTACAACGAGTCTGGTCGTCTTAGCTGTAGCTGTAGGCATTAGCTGCCTCGGACGTCGGGCCAAATGGCACATT ATCCCACTACTTGTCACTGACGCAGTCATATCCTATCTATGGCTCACCTCGTTCATTCTGCTCGCTCTGAACTTC AACCGGAGGACCTGTCGCGTGAACCGCTGGATCGGAGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTT AGTTTTATTGCATTTTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTACTGGGCGAAGCCCGAT AACGTCCTGCGAACAGAAAAGAGGCCACACCAAGAACGCCTTTCTGAAAACCTCAATGCGGCTGGACTGACATAA
Transcript	>Ani_SJS72_1\|g7487.t1 ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCGAACGATCCAAGCCATCAGCTCGATC ATCGTCCTCGGAATTACAGCCTGGGCTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT GCTACAACGAGTCTGGTCGTCTTAGCTGTAGCTGTAGGCATTAGCTGCCTCGGACGTCGGGCCAAATGGCACATT ATCCCACTACTTGTCACTGACGCAGTCATATCCTATCTATGGCTCACCTCGTTCATTCTGCTCGCTCTGAACTTC AACCGGAGGACCTGTCGCGTGAACCGCTGGATCGGAGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTT AGTTTTATTGCATTTTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTACTGGGCGAAGCCCGAT AACGTCCTGCGAACAGAAAAGAGGCCACACCAAGAACGCCTTTCTGAAAACCTCAATGCGGCTGGACTGACATAA
Gene	>Ani_SJS72_1\|g7487.t1 ATGACTGATTATATTGGCCATCCTTTGGGGCTAGTAGGATGGTTTGCCCGAACGATCCAAGCCATCAGCTCGATC ATCGTCCTCGGAATTACAGCCTGGGCTGTACAAGAGAACAACAAGACGCTCAGCGTTATTTTTTCTCTTGTCATT GTAAGTAGTTGGTCAAGTGACGTATATAATCAGATCTCGTTCTCACCTTGGTACAGGCTACAACGAGTCTGGTCG TCTTAGCTGTAGCTGTAGGCATTAGCTGCCTCGGACGTCGGGCCAAATGGCACATTATCCCACTACTTGTCACTG ACGCAGTCATATCCTATCTGTAAGTAGCTATCGAATGGTATAGGTAAGACTTTTCAAGCTAAATGCTTACCACTG CAGATGGCTCACCTCGTTCATTCTGCTCGCTCTGAACTTCAACCGGAGGACCTGTCGCGTGAACCGCTGGATCGG AGAAGTATCTTGCTCCCGAAGCTATACTGCCGAGGCATTTAGTTTTATTGCATTGTAAGTGACTCGGAGAGACCC CGTCAATCTTCTTTGTTGACTTGTTACAGTTTCACTACTCTCATGGGCCTATTCTTGGAGACTGCCTACCTTTAC TGGGCGAAGCCCGATAACGTCCTGCGAACAGAAAAGAGGCCACACCAAGAACGCCTTTCTGAAAACCTCAATGCG GCTGGACTGACATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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