© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g7480.t1 |
| Gene name | |
| Location | scaffold_061:126480..128299 |
| Strand | + |
| Gene length (bp) | 1819 |
| Transcript length (bp) | 1644 |
| Coding sequence length (bp) | 1644 |
| Protein length (aa) | 548 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.3E-108 | 10 | 491 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-29 | 63 | 357 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 2.2E-05 | 60 | 157 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 24 | 22 |
| 2 | 66 | 85 | 19 |
| 3 | 157 | 179 | 22 |
| 4 | 189 | 211 | 22 |
| 5 | 279 | 301 | 22 |
| 6 | 314 | 336 | 22 |
| 7 | 343 | 365 | 22 |
| 8 | 392 | 414 | 22 |
| 9 | 427 | 449 | 22 |
| 10 | 459 | 476 | 17 |
| Orthofinder run ID | 3 |
| Orthogroup | 1674 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7480.t1 MLIGNIYVIASVAVVGGGLFGFDISSMSAQLSENSYLCYFNQGPKGPPFTDDEDCSGPTSLNQGGITAAMAAGSW LGALISGPLSDRIGRKTSIMVGCVVWLIGSTIMCASQNIGMLVVGRVINGLAVGIESAQVPVYISELSPPSKRGR FVGMQQWAITWGILIMFYISYGCSFIGGQKSYNYSTASWRVPWGLQMLPAVFLFLGMLVLPESPRWLARKDRWED CHRVLALVHAKGDLNHPFVALELQDIRDMCELERQFKDVTYLDLFKPRMINRTLIGLFMQIWSQLTGMNVMMYYI TYLFSMAGYTGDSTLLASSIQYIINVFMTLPALIWMDKWGRRMPLLVGAALMAILMYANGAIMAVHGVVVPGGIN GVAAESMRLHGAPAKGLIACTYLFVASYAPTWGPVSWTYPPELYPLRLRGKGVALSTSGNWAFNTALGLFTPTAF ENIRWKTYIMFGVFNTAMFLHVLFLFPETAGKTLEETEAMFEDPNGIKYIGTPAWKTKMKTRQVEQLEHGQVDIE SKIETRHAETTETAPKSQEATA* |
| Coding | >Ani_SJS72_1|g7480.t1 ATGTTGATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTTGTTTGGCTTTGATATTTCC TCCATGTCCGCTCAGCTGAGCGAGAATTCCTATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACT GACGATGAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGCCATGGCAGCTGGATCTTGG CTGGGTGCTTTGATTTCAGGTCCGCTTTCCGATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTT TGGCTGATTGGTTCCACCATTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGTTGGGCGGGTCATCAACGGT CTCGCGGTGGGCATTGAGTCTGCTCAGGTCCCCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGG TTCGTAGGTATGCAGCAATGGGCCATTACATGGGGTATCCTCATTATGTTCTATATCTCGTATGGCTGCTCCTTC ATCGGGGGACAGAAGTCCTACAACTACAGCACTGCTTCTTGGCGAGTCCCCTGGGGCTTGCAGATGCTGCCGGCT GTTTTCCTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCGTTGGCTGGCGCGCAAGGATCGTTGGGAGGAC TGCCATCGGGTCTTGGCTCTCGTCCACGCCAAGGGGGATCTCAACCATCCTTTCGTTGCGCTAGAGTTGCAGGAC ATTCGGGATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCACTTACCTTGACCTGTTCAAACCGAGGATGATC AACCGCACGTTGATCGGTCTGTTCATGCAGATCTGGTCTCAGCTGACCGGCATGAATGTGATGATGTACTACATC ACGTATCTCTTTTCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGCCTCCTCCATTCAGTATATTATCAAT GTGTTTATGACCCTCCCGGCACTGATCTGGATGGACAAGTGGGGTCGTCGCATGCCATTGCTGGTTGGCGCAGCT CTGATGGCCATCTTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGGTGTTGTGGTGCCCGGGGGCATCAAT GGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTCCTGCCAAAGGTTTGATTGCTTGCACATACCTCTTCGTC GCGTCGTATGCGCCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGAGCTGTATCCGCTGCGGCTGCGTGGT AAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGTTTAACACTGCATTGGGGCTGTTTACACCCACTGCATTT GAGAACATCCGCTGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGCCATGTTCTTGCACGTGCTGTTCCTG TTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCGAAGCCATGTTCGAGGATCCCAACGGCATCAAGTACATT GGCACACCGGCCTGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCTGGAGCACGGTCAAGTGGATATAGAG TCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGACCGCTCCCAAATCCCAGGAGGCCACAGCATAA |
| Transcript | >Ani_SJS72_1|g7480.t1 ATGTTGATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTTGTTTGGCTTTGATATTTCC TCCATGTCCGCTCAGCTGAGCGAGAATTCCTATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACT GACGATGAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGCCATGGCAGCTGGATCTTGG CTGGGTGCTTTGATTTCAGGTCCGCTTTCCGATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTT TGGCTGATTGGTTCCACCATTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGTTGGGCGGGTCATCAACGGT CTCGCGGTGGGCATTGAGTCTGCTCAGGTCCCCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGG TTCGTAGGTATGCAGCAATGGGCCATTACATGGGGTATCCTCATTATGTTCTATATCTCGTATGGCTGCTCCTTC ATCGGGGGACAGAAGTCCTACAACTACAGCACTGCTTCTTGGCGAGTCCCCTGGGGCTTGCAGATGCTGCCGGCT GTTTTCCTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCGTTGGCTGGCGCGCAAGGATCGTTGGGAGGAC TGCCATCGGGTCTTGGCTCTCGTCCACGCCAAGGGGGATCTCAACCATCCTTTCGTTGCGCTAGAGTTGCAGGAC ATTCGGGATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCACTTACCTTGACCTGTTCAAACCGAGGATGATC AACCGCACGTTGATCGGTCTGTTCATGCAGATCTGGTCTCAGCTGACCGGCATGAATGTGATGATGTACTACATC ACGTATCTCTTTTCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGCCTCCTCCATTCAGTATATTATCAAT GTGTTTATGACCCTCCCGGCACTGATCTGGATGGACAAGTGGGGTCGTCGCATGCCATTGCTGGTTGGCGCAGCT CTGATGGCCATCTTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGGTGTTGTGGTGCCCGGGGGCATCAAT GGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTCCTGCCAAAGGTTTGATTGCTTGCACATACCTCTTCGTC GCGTCGTATGCGCCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGAGCTGTATCCGCTGCGGCTGCGTGGT AAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGTTTAACACTGCATTGGGGCTGTTTACACCCACTGCATTT GAGAACATCCGCTGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGCCATGTTCTTGCACGTGCTGTTCCTG TTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCGAAGCCATGTTCGAGGATCCCAACGGCATCAAGTACATT GGCACACCGGCCTGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCTGGAGCACGGTCAAGTGGATATAGAG TCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGACCGCTCCCAAATCCCAGGAGGCCACAGCATAA |
| Gene | >Ani_SJS72_1|g7480.t1 ATGTTGATTGGCAACATCTACGTGATTGCGAGCGTCGCCGTCGTCGGCGGCGGCTTGTTTGGCTTTGATATTTCC TCCATGTCCGCTCAGCTGAGCGAGAATTCCTATCTATGCTATTTCAACCAGGGCCCTAAGGGTCCTCCCTTCACT GACGATGAGGACTGTTCTGGTCCCACATCCCTCAACCAGGGTGGCATCACGGCAGCCATGGCAGCTGGATCTTGG CTGGGTGCTTTGATTTCAGGTCCGCTTTCCGATCGCATCGGACGTAAGACGTCCATCATGGTCGGCTGTGTCGTT TGGTAGGTCAAACTCTGGAGCCCGTGGTGGTGGTTGCTAACCCTGCCGCAATGCCTAGGCTGATTGGTTCCACCA TTATGTGCGCTTCTCAGAACATCGGTATGCTCGTTGTTGGGCGGGTCATCAACGGTCTCGCGGTGGGCATTGAGT CTGCTCAGGTCCCCGTCTACATCAGTGAACTTTCGCCACCCTCCAAGCGCGGTCGGTTCGTAGGTATGCAGCAAT GGGCCATTACATGGGGTATCCTCATTATGTTCTAGTAAGTGATCGCGGGTGGGATCTCTAGTGGGACTAAACTAA TGGAGTCAGTATCTCGTATGGCTGCTCCTTCATCGGGGGACAGAAGTCCTACAACTACAGCACTGCTTCTTGGCG AGTCCCCTGGGGCTTGCAGATGCTGCCGGCTGTTTTCCTTTTCCTTGGAATGCTGGTTCTGCCCGAATCTCCTCG TTGGCTGGCGCGCAAGGATCGTTGGGAGGACTGCCATCGGGTCTTGGCTCTCGTCCACGCCAAGGGGGATCTCAA CCATCCTTTCGTTGCGCTAGAGTTGCAGGACATTCGGGATATGTGTGAGCTTGAACGTCAGTTCAAAGATGTCAC TTACCTTGACCTGTTCAAACCGAGGATGATCAACCGCACGTTGATCGGTCTGTTCATGCAGATCTGGTCTCAGCT GACCGGCATGAATGTGATGAGTACGTCTTCGTTTTCCCGTCTAGTCCGTTATTAGGACTGTGCGCTAACGAGATG TTTACTTTTGACAGTGTACTACATCACGTATCTCTTTTCTATGGCTGGATACACCGGCGATTCCACCCTCCTTGC CTCCTCCATTCAGTATATTATCAATGTGTTTATGACCCTCCCGGCACTGATCTGGATGGACAAGTGGGGTCGTCG CATGCCATTGCTGGTTGGCGCAGCTCTGATGGCCATCTTGATGTATGCCAATGGTGCGATCATGGCGGTTCATGG TGTTGTGGTGCCCGGGGGCATCAATGGGGTTGCAGCTGAGTCCATGCGTCTTCACGGCGCTCCTGCCAAAGGTTT GATTGCTTGCACATACCTCTTCGTCGCGTCGTATGCGCCTACCTGGGGTCCTGTATCCTGGACGTACCCCCCTGA GCTGTATCCGCTGCGGCTGCGTGGTAAGGGAGTGGCTTTGTCGACCTCAGGTAACTGGGCGTTTAACACTGCATT GGGGCTGTTTACACCCACTGCATTTGAGAACATCCGCTGGAAGACCTACATCATGTTTGGGGTGTTCAACACTGC CATGTTCTTGCACGTGCTGTTCCTGTTCCCGGAGACTGCAGGAAAGACGCTCGAAGAGACCGAAGCCATGTTCGA GGATCCCAACGGCATCAAGTACATTGGCACACCGGCCTGGAAGACCAAGATGAAGACCCGGCAGGTGGAGCAGCT GGAGCACGGTCAAGTGGATATAGAGTCCAAGATTGAAACCCGCCACGCAGAGACCACTGAGACCGCTCCCAAATC CCAGGAGGCCACAGCATAA |