© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7435.t1 |
| Gene name | |
| Location | scaffold_060:202823..205109 |
| Strand | - |
| Gene length (bp) | 2286 |
| Transcript length (bp) | 2016 |
| Coding sequence length (bp) | 2016 |
| Protein length (aa) | 672 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00955 | HCO3_cotransp | HCO3- transporter family | 1.5E-45 | 91 | 254 |
| PF00955 | HCO3_cotransp | HCO3- transporter family | 4.9E-39 | 265 | 529 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0006820 | anion transport | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 116 | 138 | 22 |
| 2 | 155 | 177 | 22 |
| 3 | 197 | 219 | 22 |
| 4 | 232 | 254 | 22 |
| 5 | 269 | 291 | 22 |
| 6 | 298 | 320 | 22 |
| 7 | 351 | 370 | 19 |
| 8 | 396 | 418 | 22 |
| 9 | 473 | 495 | 22 |
| 10 | 530 | 549 | 19 |
| 11 | 553 | 575 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7435.t1 MQGPTASTSGSHSGGGGGVGETLPPSSSHSRRPWQSQSQSQHLRPTSSIRSQHSTHVHHDHRYQSSVVGSGAGNA APSGNEKDEKWYKIHLFRGMIQDVKRRAPFYWSDWTDAWDYRVVPATVYMYFANILPALAFSLDMFEKTNQSYGV NEVLLASVLAAVVFSVFAAQPLVIVGVTGPITVFNYTVYDIISPRGTNYLAFMCWIGIWSLIMHWLLAITNACNG LTYVTRFSCDIFGFYVAFIYLQKGIQVLTRQWGTAGETSAYLSIMVALLVLMSGWICGELGNSSLFKRWVRKFLE DYGTPLTIVFFTGFVHIGHMRDVEVARLPTSKAFFPTEERPWLVHFWDINVGDVFLAIPFAVLLTILFYFDHNVS SLIAQGTEFPLRKPAGFHWDLWLLGITTFVAGLLGIPFPNGLIPQAPFHTAALCVTRDVADEDDTNKGKAIRVTD HVVEQRVSNFAQGLMTLGTMTGPLLIVLHLIPQAVLAGLFFIMGVQALQGNGITQKLIFLAQDSGLTPASNPLKR IKRRLSIWVFVILELIGFGATFAITQTIAAIGFPVIILLLIPVRSFLFPWWFTQEELSVLDAPTASPFTMESVGG THGLSDAATAAASGRDEDHRDSKNGGGGNGVMMRRDESSSESAVEDDLERGEAYEMQRLGVRRRSTTGGVE* |
| Coding | >Ani_SJS72_1|g7435.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCCCCG TCGTCCTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCATGACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCCGGTAATGCT GCTCCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTCCGCGGCATGATTCAGGATGTGAAG CGAAGGGCTCCGTTCTATTGGAGTGATTGGACGGATGCCTGGGATTATCGCGTTGTGCCGGCCACGGTGTATATG TATTTTGCTAATATCCTCCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACAAACCAGAGTTATGGCGTT AATGAGGTCTTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTG GGTGTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTG GCGTTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATCACCAATGCCTGTAATGGT CTCACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATT CAGGTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTG CTTATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAG GATTATGGCACTCCTTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTG GCGAGGCTGCCCACGAGCAAAGCATTTTTCCCGACGGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAAT GTCGGCGATGTGTTTCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTTTGTTTTATTTTGACCACAATGTCTCG TCTCTTATCGCCCAAGGAACCGAGTTCCCTTTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTCGGA ATCACCACCTTCGTGGCCGGTCTCCTGGGTATTCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACA GCCGCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATTCGCGTCACCGAC CACGTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGCACCATGACCGGCCCTCTGCTT ATTGTCCTGCACCTAATTCCCCAGGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGC AACGGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGC ATCAAACGCCGTCTCTCCATCTGGGTGTTTGTTATCCTGGAGTTGATCGGCTTCGGTGCCACCTTTGCCATTACC CAGACTATTGCTGCCATCGGCTTCCCGGTTATTATTCTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGG TGGTTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGG ACCCACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGG GGTGGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGA GGCGAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
| Transcript | >Ani_SJS72_1|g7435.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCCCCG TCGTCCTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCATGACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCCGGTAATGCT GCTCCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTCCGCGGCATGATTCAGGATGTGAAG CGAAGGGCTCCGTTCTATTGGAGTGATTGGACGGATGCCTGGGATTATCGCGTTGTGCCGGCCACGGTGTATATG TATTTTGCTAATATCCTCCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACAAACCAGAGTTATGGCGTT AATGAGGTCTTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTG GGTGTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTG GCGTTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATCACCAATGCCTGTAATGGT CTCACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATT CAGGTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTG CTTATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAG GATTATGGCACTCCTTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTG GCGAGGCTGCCCACGAGCAAAGCATTTTTCCCGACGGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAAT GTCGGCGATGTGTTTCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTTTGTTTTATTTTGACCACAATGTCTCG TCTCTTATCGCCCAAGGAACCGAGTTCCCTTTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTCGGA ATCACCACCTTCGTGGCCGGTCTCCTGGGTATTCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACA GCCGCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATTCGCGTCACCGAC CACGTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGCACCATGACCGGCCCTCTGCTT ATTGTCCTGCACCTAATTCCCCAGGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGC AACGGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGC ATCAAACGCCGTCTCTCCATCTGGGTGTTTGTTATCCTGGAGTTGATCGGCTTCGGTGCCACCTTTGCCATTACC CAGACTATTGCTGCCATCGGCTTCCCGGTTATTATTCTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGG TGGTTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGG ACCCACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGG GGTGGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGA GGCGAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
| Gene | >Ani_SJS72_1|g7435.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCCCCG TCGTCCTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCATGACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCCGGTAATGCT GCTCCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTCCGCGGCATGATTCAGGATGTGAAG CGAAGGGCTCCGTTCTATTGGAGTGATTGGACGGATGCCTGGGATTATCGCGTTGTGCCGGCCACGGTGTATATG TATTTTGCTAAGTGGGTTGAATCCTGTTTCTTTTCTTTTGGTGTTGGTTGTGTTTATTTGGGATTTGGTTTGGGA AGGGGGAGAAAGTGTGCTGATTCGGGTTGTGTAGTATCCTCCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAA AAACAAACCAGAGTTATGGCGTTAATGAGGTCTTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTG CGGCGCAGCCGTTGGTTATTGTGGGTGTTACTGGTATGTTTTACTTTCTCTCCCTCTCTCTATTTCATTTGCTGG TGGAGTGTATGTTGATTGGTTGGTAAGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCC GGGGAACGAATTATTTGGCGTTTATGTGCTGGATTGGGATGTGAGTCTTCTTTCCGCGTTCTCTCTTTGGCAGCT CTCGTACTGATCATTGTAGATGGTCGTTGATTATGCATTGGCTGCTTGCCATCACCAATGCCTGTAATGGTCTCA CCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAGG TCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTTA TGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGATT ATGGCACTCCTTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCGA GGCTGCCCACGAGCAAAGCATTTTTCCCGACGGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTCG GCGATGTGTTTCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTTTGTTTTATTTTGACCACAATGGTAAGTCTA CATTCAGGATAAAAACATACTCGGTTGACTGACCATATAGTCTCGTCTCTTATCGCCCAAGGAACCGAGTTCCCT TTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTCGGAATCACCACCTTCGTGGCCGGTCTCCTGGGT ATTCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCCGCTCTCTGCGTCACCCGCGACGTCGCC GACGAAGACGACACCAACAAAGGCAAAGCCATTCGCGTCACCGACCACGTCGTCGAGCAACGCGTCAGCAACTTC GCCCAAGGCCTCATGACCCTGGGCACCATGACCGGCCCTCTGCTTATTGTCCTGCACCTAATTCCCCAGGCCGTC CTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAACGGCATCACCCAGAAACTCATCTTCCTC GCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATCAAACGCCGTCTCTCCATCTGGGTGTTT GTTATCCTGGAGTTGATCGGCTTCGGTGCCACCTTTGCCATTACCCAGACTATTGCTGCCATCGGCTTCCCGGTT ATTATTCTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGGTTTACGCAGGAGGAACTGTCCGTTCTG GATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACCCACGGGCTGAGTGATGCTGCTACTGCT GCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGTGGAGGTAATGGGGTTATGATGCGTCGG GATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGCGAGGCGTATGAGATGCAGAGGTTGGGT GTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |