© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7322.t1 |
| Gene name | |
| Location | scaffold_059:53153..54054 |
| Strand | + |
| Gene length (bp) | 901 |
| Transcript length (bp) | 705 |
| Coding sequence length (bp) | 705 |
| Protein length (aa) | 235 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04117 | Mpv17_PMP22 | Mpv17 / PMP22 family | 4.0E-12 | 146 | 202 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 87 | 109 | 22 |
| 2 | 122 | 144 | 22 |
| 3 | 186 | 205 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7322.t1 MSAKFQDEAVTSIREDTKELVHKVGNRLTGDGYLALYLRQLQSNPLRTKMLTSGVLSSLQEILASWIAHDVSKHG HYFSARVPKMALYGMFISAPLGHFLIGILQRVFAGRTSIKAKILQILASNLLVSPIQNAVYLCCMAVIAGARTFH QVRATVRAGFMPVMKVSWVTSPIALAFAQKFLPEHTWVPFFNIVGFVIGTYVNTHTKKKRLEALRKRYDQRRGPG SEYDKGDYR* |
| Coding | >Ani_SJS72_1|g7322.t1 ATGTCTGCCAAGTTCCAGGATGAGGCCGTCACCTCGATACGGGAGGACACAAAGGAATTGGTGCACAAGGTTGGA AACCGGTTGACTGGCGATGGCTATCTCGCTCTCTACCTCCGCCAACTGCAGTCCAACCCCCTGCGCACTAAGATG TTGACCTCCGGTGTCCTGTCCAGTCTGCAAGAAATCCTGGCCTCGTGGATCGCCCATGATGTCAGCAAGCACGGT CACTACTTCAGCGCCCGCGTCCCCAAAATGGCCCTCTACGGAATGTTCATCAGCGCCCCGCTGGGCCACTTTCTC ATCGGAATTCTGCAGCGGGTCTTCGCTGGCCGGACTAGCATCAAGGCCAAGATCCTGCAAATTCTCGCCAGCAAC TTGTTGGTCTCCCCCATCCAAAACGCCGTGTACCTGTGCTGCATGGCCGTTATCGCGGGCGCGCGCACCTTCCAC CAGGTCCGCGCTACCGTGCGGGCCGGTTTCATGCCCGTCATGAAGGTCAGCTGGGTCACCTCGCCCATTGCGCTG GCCTTTGCCCAGAAGTTCCTCCCCGAGCACACCTGGGTGCCTTTCTTCAACATTGTCGGGTTCGTCATTGGAACC TACGTCAACACGCACACCAAGAAGAAGCGTCTTGAGGCTCTCCGCAAGCGCTACGACCAACGCCGTGGACCCGGT AGCGAGTACGACAAGGGCGACTACCGGTAA |
| Transcript | >Ani_SJS72_1|g7322.t1 ATGTCTGCCAAGTTCCAGGATGAGGCCGTCACCTCGATACGGGAGGACACAAAGGAATTGGTGCACAAGGTTGGA AACCGGTTGACTGGCGATGGCTATCTCGCTCTCTACCTCCGCCAACTGCAGTCCAACCCCCTGCGCACTAAGATG TTGACCTCCGGTGTCCTGTCCAGTCTGCAAGAAATCCTGGCCTCGTGGATCGCCCATGATGTCAGCAAGCACGGT CACTACTTCAGCGCCCGCGTCCCCAAAATGGCCCTCTACGGAATGTTCATCAGCGCCCCGCTGGGCCACTTTCTC ATCGGAATTCTGCAGCGGGTCTTCGCTGGCCGGACTAGCATCAAGGCCAAGATCCTGCAAATTCTCGCCAGCAAC TTGTTGGTCTCCCCCATCCAAAACGCCGTGTACCTGTGCTGCATGGCCGTTATCGCGGGCGCGCGCACCTTCCAC CAGGTCCGCGCTACCGTGCGGGCCGGTTTCATGCCCGTCATGAAGGTCAGCTGGGTCACCTCGCCCATTGCGCTG GCCTTTGCCCAGAAGTTCCTCCCCGAGCACACCTGGGTGCCTTTCTTCAACATTGTCGGGTTCGTCATTGGAACC TACGTCAACACGCACACCAAGAAGAAGCGTCTTGAGGCTCTCCGCAAGCGCTACGACCAACGCCGTGGACCCGGT AGCGAGTACGACAAGGGCGACTACCGGTAA |
| Gene | >Ani_SJS72_1|g7322.t1 ATGTCTGCCAAGTTCCAGGATGAGGCCGTCACCTCGATACGGGAGGACACAAAGGAATTGGTGCACAAGGTTGGA AACCGGTTGACTGGCGATGGCTATCTCGCTGTAGGTTTTGCGCCTGTGTAATCACACCCCGAATGCGTGTTTTGC AGTCCACTGATTGAGACAATGCGCGTCCGTTATAGCTCTACCTCCGCCAACTGCAGTCCAACCCCCTGCGCACTA AGATGTTGACCTCCGGTGTCCTGTCCAGTCTGCAAGAAATCCTGGCCTCGTGGATCGCCCATGATGTCAGCAAGC ACGGTCACTACTTCAGCGCCCGCGTCCCCAAAATGGCCCTCTACGGAATGTTCATCAGCGCCCCGCTGGGCCACT TTCTCATCGGAATTCTGCAGCGGGTCTTCGCTGGCCGGACTAGCATCAAGGCCAAGATCCTGCAAATTCTCGCCA GCAACTTGTTGGTATGTTCGATCTGACACTCCCCTTCTGACGTGCGGCTGGAATGCTGACGCGACGCAGGTCTCC CCCATCCAAAACGCCGTGTACCTGTGCTGCATGGCCGTTATCGCGGGCGCGCGCACCTTCCACCAGGTCCGCGCT ACCGTGCGGGCCGGTTTCATGCCCGTCATGAAGGTCAGCTGGGTCACCTCGCCCATTGCGCTGGCCTTTGCCCAG AAGTTCCTCCCCGAGCACACCTGGGTGCCTTTCTTCAACATTGTCGGGTTCGTCATTGGAACCTACGTCAACACG CACACCAAGAAGAAGCGTCTTGAGGCTCTCCGCAAGGTAAATCAACTACGTGACGATCCCGCCGACGCGACCAGT CGCTAACCTAGCACGACAGCGCTACGACCAACGCCGTGGACCCGGTAGCGAGTACGACAAGGGCGACTACCGGTA A |