© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7255.t1 |
| Gene name | |
| Location | scaffold_058:90188..91129 |
| Strand | + |
| Gene length (bp) | 941 |
| Transcript length (bp) | 867 |
| Coding sequence length (bp) | 867 |
| Protein length (aa) | 289 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13640 | 2OG-FeII_Oxy_3 | 2OG-Fe(II) oxygenase superfamily | 2.3E-12 | 160 | 278 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7255.t1 MPKLSLSTLLTSLFYLLPLYLFVIAPLLRQLFPVTQDIFDPDTDATTESDISLDPEILSLPDGIIPTCPEDTYRV HLLSKDPLIIYIEDFLSTAEADHLVKISEPNYSPSIIYNGQTTKVDPSTRLSDRALLPRDNTVRCLESRAAAFQG WKPHLYIERMWAQRYNVSGHYKHHFDWAGSVARGGDRLSTFMVYLGDECEGGGTNFPRLKMPRGDQWCQFLDCEM AQNENVSGITFKPIKGNAIFWENLRSDGTGYPETWHAAFPVTQGMKVGLNIWSWYQPPSRGRR* |
| Coding | >Ani_SJS72_1|g7255.t1 ATGCCCAAACTCTCCCTCTCCACCCTCCTCACCTCCCTCTTCTACCTCCTTCCACTCTACCTCTTCGTCATCGCC CCCCTCCTCCGCCAACTCTTCCCAGTAACACAGGACATCTTCGACCCAGACACGGACGCAACAACAGAAAGCGAC ATCTCACTGGACCCGGAGATCCTCAGCCTCCCAGACGGAATCATCCCAACATGTCCCGAAGACACCTACCGAGTC CACCTCCTCTCCAAGGACCCGCTAATCATCTACATTGAAGATTTCCTCTCCACTGCAGAAGCCGATCACCTAGTA AAGATAAGTGAACCAAACTACTCCCCCTCAATAATCTACAACGGCCAAACCACCAAAGTCGACCCCTCGACCCGA CTCTCCGACCGCGCCCTCCTCCCCCGCGACAACACCGTCCGCTGCCTCGAATCCCGCGCCGCCGCCTTCCAAGGC TGGAAACCACACCTCTACATCGAGCGCATGTGGGCCCAACGCTACAACGTCTCCGGCCACTACAAACACCACTTC GACTGGGCGGGTTCCGTCGCCCGCGGCGGCGACAGACTCAGCACATTCATGGTATACCTAGGAGATGAGTGCGAA GGCGGGGGCACGAATTTTCCACGTCTGAAGATGCCGCGCGGAGACCAATGGTGTCAGTTCCTGGACTGCGAGATG GCTCAGAATGAGAATGTGTCTGGGATCACCTTCAAGCCTATCAAGGGAAATGCCATCTTTTGGGAGAACTTGAGG TCTGATGGAACGGGTTATCCGGAGACATGGCATGCTGCATTCCCGGTCACTCAGGGCATGAAGGTTGGGTTGAAT ATTTGGAGTTGGTATCAGCCGCCGTCTAGGGGGAGGAGGTAA |
| Transcript | >Ani_SJS72_1|g7255.t1 ATGCCCAAACTCTCCCTCTCCACCCTCCTCACCTCCCTCTTCTACCTCCTTCCACTCTACCTCTTCGTCATCGCC CCCCTCCTCCGCCAACTCTTCCCAGTAACACAGGACATCTTCGACCCAGACACGGACGCAACAACAGAAAGCGAC ATCTCACTGGACCCGGAGATCCTCAGCCTCCCAGACGGAATCATCCCAACATGTCCCGAAGACACCTACCGAGTC CACCTCCTCTCCAAGGACCCGCTAATCATCTACATTGAAGATTTCCTCTCCACTGCAGAAGCCGATCACCTAGTA AAGATAAGTGAACCAAACTACTCCCCCTCAATAATCTACAACGGCCAAACCACCAAAGTCGACCCCTCGACCCGA CTCTCCGACCGCGCCCTCCTCCCCCGCGACAACACCGTCCGCTGCCTCGAATCCCGCGCCGCCGCCTTCCAAGGC TGGAAACCACACCTCTACATCGAGCGCATGTGGGCCCAACGCTACAACGTCTCCGGCCACTACAAACACCACTTC GACTGGGCGGGTTCCGTCGCCCGCGGCGGCGACAGACTCAGCACATTCATGGTATACCTAGGAGATGAGTGCGAA GGCGGGGGCACGAATTTTCCACGTCTGAAGATGCCGCGCGGAGACCAATGGTGTCAGTTCCTGGACTGCGAGATG GCTCAGAATGAGAATGTGTCTGGGATCACCTTCAAGCCTATCAAGGGAAATGCCATCTTTTGGGAGAACTTGAGG TCTGATGGAACGGGTTATCCGGAGACATGGCATGCTGCATTCCCGGTCACTCAGGGCATGAAGGTTGGGTTGAAT ATTTGGAGTTGGTATCAGCCGCCGTCTAGGGGGAGGAGGTAA |
| Gene | >Ani_SJS72_1|g7255.t1 ATGCCCAAACTCTCCCTCTCCACCCTCCTCACCTCCCTCTTCTACCTCCTTCCACTCTACCTCTTCGTCATCGCC CCCCTCCTCCGCCAACTCTTCCCAGTAACACAGGACATCTTCGACCCAGACACGGACGCAACAACAGAAAGCGAC ATCTCACTGGACCCGGAGATCCTCAGCCTCCCAGACGGAATCATCCCAACATGTCCCGAAGACACCTACCGAGTC CACCTCCTCTCCAAGGACCCGCTAATCATCTACATTGAAGATTTCCTCTCCACTGCAGAAGCCGATCACCTAGTA AAGATAAGGTCCGTCTGAAACCTCTCCATCGTCGTTCCCCACAGCCCCAATCCCCATCTTAACCCAACCTAATCC CAACAAGTGAACCAAACTACTCCCCCTCAATAATCTACAACGGCCAAACCACCAAAGTCGACCCCTCGACCCGAC TCTCCGACCGCGCCCTCCTCCCCCGCGACAACACCGTCCGCTGCCTCGAATCCCGCGCCGCCGCCTTCCAAGGCT GGAAACCACACCTCTACATCGAGCGCATGTGGGCCCAACGCTACAACGTCTCCGGCCACTACAAACACCACTTCG ACTGGGCGGGTTCCGTCGCCCGCGGCGGCGACAGACTCAGCACATTCATGGTATACCTAGGAGATGAGTGCGAAG GCGGGGGCACGAATTTTCCACGTCTGAAGATGCCGCGCGGAGACCAATGGTGTCAGTTCCTGGACTGCGAGATGG CTCAGAATGAGAATGTGTCTGGGATCACCTTCAAGCCTATCAAGGGAAATGCCATCTTTTGGGAGAACTTGAGGT CTGATGGAACGGGTTATCCGGAGACATGGCATGCTGCATTCCCGGTCACTCAGGGCATGAAGGTTGGGTTGAATA TTTGGAGTTGGTATCAGCCGCCGTCTAGGGGGAGGAGGTAA |