© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g7242.t1 |
| Gene name | |
| Location | scaffold_058:38931..40883 |
| Strand | + |
| Gene length (bp) | 1952 |
| Transcript length (bp) | 1662 |
| Coding sequence length (bp) | 1662 |
| Protein length (aa) | 554 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 1.7E-23 | 267 | 455 |
| PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 4.2E-07 | 479 | 538 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 264 | 286 | 22 |
| 2 | 290 | 312 | 22 |
| 3 | 333 | 355 | 22 |
| 4 | 370 | 389 | 19 |
| 5 | 409 | 431 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7242.t1 MFEPARPRLRLKNAVRVPPSLTRSTKSSLPPSQNASSSINTVPPMLTSSPRSDSFIRARQPSLDLEHDLLSTRGQ RLGGLIRRRSLSVQSADNPYDSERLEDSIQDRGDRPVAFERARRLIGESRPIYRWQHFYQDPTTLKKMPKAMREY YERNNDLISQYVFIDRLLDSSLPHRLIVDYHSNQPGEPPVSTNGRAYDATSYGTGDTKASGKIKRTPRNLYRIPS ENETSPLLPPMIEERVASPPDIIPTNDEFVDSSDRIVTVAIYVNFIANVLLLVAKIIAMTMTNSLSVLASLVDGA LDFLSTAIVWITTTLIRRQDRSRYPISRRRLEPLSVLVFAVVMVTSFVQVALTSFTRLISSDRSVVDLSLPSIAV MASTVIVKLICWFWCRLIKNSSVQALAQDAMTDVIFNLFSILFPLIGSLTTTWYIDPLGGLLLSLYIIYNWSATA SEHIGHLTGAAASPKDHSILLYMTMRFSKAILKIQDLKAYYAGDRLNVEVDIVLDPKTRLQDSHDVGESLQYMVE SVPTVDRAFVHIDYDPWNIPSHMNQIEG* |
| Coding | >Ani_SJS72_1|g7242.t1 ATGTTTGAGCCCGCGCGCCCCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACC AAGTCATCGCTGCCGCCTAGTCAGAATGCTTCTTCATCCATTAATACTGTGCCACCAATGCTTACCTCTTCGCCG CGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAA CGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTT GAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGG CCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTAT TACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGT CTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACC TCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGC GAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACA AACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTC CTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCA CTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCG ATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTC GCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTC ATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCA CTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACC ACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCC AGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATG CGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTG GATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAG AGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAG ATTGAGGGGTGA |
| Transcript | >Ani_SJS72_1|g7242.t1 ATGTTTGAGCCCGCGCGCCCCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACC AAGTCATCGCTGCCGCCTAGTCAGAATGCTTCTTCATCCATTAATACTGTGCCACCAATGCTTACCTCTTCGCCG CGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAA CGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTT GAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGG CCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTAT TACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGT CTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACC TCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGC GAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACA AACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTC CTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCA CTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCG ATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTC GCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTC ATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCA CTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACC ACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCC AGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATG CGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTG GATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAG AGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAG ATTGAGGGGTGA |
| Gene | >Ani_SJS72_1|g7242.t1 ATGTTTGAGGTGAGAAAGTTCTGTCGGACTCCATCTCATAATGGTGAGCTAACAGCTCGGCCCAGCCCGCGCGCC CCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACCAAGTCATCGCTGCCGCCTA GTCAGAATGCTTCTTCATCCATTAAGTTTATACGCCATTCAATGCAAGGGAAGGGAAGATGTCCTCGACACCTCG GTCTAGTACTGTGCCACCAATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCT TGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGT CCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGC TTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGTATGCCATTTCCCCTCGTTTCAC AGCTTAGTTAATATGTACTAAAGGGGAAATGCAGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGC CAAAGGCCATGTACGTCCCCGTCTATGGCTCCAACGCTGTGCGATCTGACACGGCAACAGGCGCGAGTATTACGA GCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGAT TGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACCTCCTA CGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAA CGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACAAACGA TGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCT AGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCACTGGA CTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAG CCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTCGCACT CACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGC CAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCACTAGC ACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCAGTAAGTTCTTCCTGCCCTC ACCCTAACTTCTCTCAACCCAAACCACACCACTAACCAATACAACAAAAAGTCGGCTCCCTGACCACAACCTGGT ACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACA TCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATGCGGTTCTCGA AAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCC TGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTA CGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGT GA |