© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g7233.t1 |
| Gene name | |
| Location | scaffold_058:21127..22124 |
| Strand | - |
| Gene length (bp) | 997 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05721 | PhyH | Phytanoyl-CoA dioxygenase (PhyH) | 2.9E-26 | 16 | 214 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7233.t1 MDNSHYALTEDQLRFYQEKGYLLIRGFFNDPETKVLQQWTQEVHDLPRTPDATYMPYEEVNAEGKRVLCRTENYA NSHAGFDSFLRGERILSVLRQLATEEMILFKEKINYKLAGSGGFSPHIDANAYTHVKKIKHLTVLAAVDEMTSEN GGLDVVDGSHLMEVPLGEDRCIEPTWVKSQTWTPCNLQPGDILVFGSYLAHKSGANTSSKDRRAIYATYNRLAEG DLHDQYYEDRRKLWPATHMRKEGESYEEGRMRYGYGSPMLTVEGQQPVLA* |
| Coding | >Ani_SJS72_1|g7233.t1 ATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCTCATCCGA GGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCA GATGCAACTTACATGCCTTATGAGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCACTGAGAATTATGCC AATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAG GAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTCGCTGGTAGTGGTGGCTTCTCCCCGCATATCGACGCT AATGCATATACTCACGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAAT GGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACG TGGGTCAAGAGCCAAACATGGACACCTTGCAATCTGCAACCGGGTGACATTCTCGTTTTTGGCTCCTACCTTGCC CACAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCGCTTGGCCGAGGGT GACCTGCACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCGGAAAGAGGGGGAGTCG TATGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCG TAG |
| Transcript | >Ani_SJS72_1|g7233.t1 ATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCTCATCCGA GGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCA GATGCAACTTACATGCCTTATGAGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCACTGAGAATTATGCC AATTCTCATGCTGGCTTCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAG GAAATGATTCTTTTCAAAGAGAAAATTAACTACAAACTCGCTGGTAGTGGTGGCTTCTCCCCGCATATCGACGCT AATGCATATACTCACGTCAAGAAAATAAAGCACCTGACAGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAAT GGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGAGGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACG TGGGTCAAGAGCCAAACATGGACACCTTGCAATCTGCAACCGGGTGACATTCTCGTTTTTGGCTCCTACCTTGCC CACAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATACAACCGCTTGGCCGAGGGT GACCTGCACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACATGCGGAAAGAGGGGGAGTCG TATGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGGTCAACAGCCGGTACTGGCG TAG |
| Gene | >Ani_SJS72_1|g7233.t1 ATGGATAACAGCCATTATGCACTGACGGAGGACCAGCTCCGGTTCTACCAGGAGAAGGGGTATTTGCTCATCCGA GGCTTTTTCAATGATCCTGAGACCAAGGTCCTGCAACAATGGACTCAGGAAGTGCATGACCTTCCGCGAACCCCA GATGCAACTTACATGCCTTATGAGGTGAGATCATAGTGTCGCCTTTCTTTAGCAGACGGCTGGCGAGCTAATTTC CGCTGCAGGAAGTAAATGCGGAAGGCAAAAGAGTTCTCTGCCGCACTGAGAATTATGCCAATTCTCATGCTGGCT TCGACAGTTTTCTGCGTGGTGAACGCATCTTGAGCGTTCTCCGTCAGCTAGCTACAGAGGAAATGATTCTTTTCA AAGAGAAAATTAACTACAAACTCGCTGGTAGTGGTAAGAAATGTAAACCTACTGCACTTGACAGGGTACCAATTA ATGCGACGCAGGTGGCTTCTCCCCGCATATCGACGCTAATGCATATACTCACGTCAAGAAAATAAAGCACCTGAC AGTGCTTGCTGCTGTTGATGAGATGACTTCGGAAAATGGTGGGCTTGACGTGGTTGACGGCAGTCATCTCATGGA GGTACCCCTTGGAGAAGATCGCTGCATTGAACCTACGTGGGTCAAGAGCCAAACATGGACACCTTGCAATCTGCA ACCGGGTATGTCTGTTATATTATGACTGCTATATTCCAGGCATTAACCATCATCTTACACAGGTGACATTCTCGT TTTTGGCTCCTACCTTGCCCACAAAAGTGGCGCCAACACCAGCTCCAAGGACCGACGCGCAATTTATGCCACATA CAACCGCTTGGCCGAGGGTGACCTGCACGATCAGTACTATGAGGATCGTCGCAAGCTGTGGCCTGCCACACACAT GCGGAAAGAGGGGGAGTCGTATGAAGAGGGCAGGATGCGGTATGGCTATGGCTCCCCGATGCTTACGGTCGAGGG TCAACAGCCGGTACTGGCGTAG |