Protein ID | Ani_SJS72_1|g721.t1 |
Gene name | |
Location | scaffold_003:460405..461852 |
Strand | + |
Gene length (bp) | 1447 |
Transcript length (bp) | 1326 |
Coding sequence length (bp) | 1326 |
Protein length (aa) | 442 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | 4.9E-11 | 378 | 434 |
Orthofinder run ID | 3 |
Orthogroup | 5146 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g721.t1 MDSASRPAFEGLPAAIPNNNNYQITPTSATLAQSNTQDVMDTTISDVPRPTYQQEVPTVASLSGAPNAFSSNAIS SQTDSFPSQQPPPRSHFSYLSNGIITMPRYTPNQYYGEPSNIGHQLDYIPGGGRGRSFAYPHARTLSLSQNQHSG LPAYPQRDPRSSNTQPTMSRTTPGSVSGVSPGDGSPNTPDLTSSTAVVPPALRPRGYVPPSARTQQGTQHPAPTA ASPVPTSSSYYQQSQAQQHSHTAGPFSHLPPHPEEFDDGAYVAPLVTTPAQSSSANFVTTGTPPSRSMNAGNSRY GRPLPQRLELARRAHLLGHHYNPQAAQAIVEAHMQLQRQRQRQRQGLGNHPTKPSASLDNAKDGRPEPKEAHEMR VSLECKVCFTQLVDTVLLPCGHAVLCRWCAEIQIPNSILERGLLGGQPPCVICRAPVKQKVRIFLS* |
Coding | >Ani_SJS72_1|g721.t1 ATGGACTCTGCGAGTCGCCCTGCTTTTGAAGGGCTTCCCGCGGCGATTCCCAACAATAACAACTATCAAATCACC CCAACTTCCGCTACGTTGGCCCAATCTAACACCCAAGACGTAATGGACACCACGATTTCTGACGTGCCGCGTCCG ACATACCAACAAGAAGTCCCTACAGTCGCGAGTCTGTCTGGGGCTCCAAACGCCTTCTCATCCAATGCTATATCG AGCCAGACAGATTCTTTCCCTTCACAGCAACCACCACCGAGGTCCCATTTTTCATACTTGAGCAATGGCATCATC ACCATGCCCCGCTACACACCGAACCAGTACTATGGGGAACCGAGCAATATCGGTCATCAACTGGATTACATTCCT GGTGGAGGTCGAGGTCGCTCATTCGCGTACCCTCATGCACGAACACTCTCACTTTCACAGAACCAACACAGCGGC CTTCCTGCCTACCCCCAGCGGGACCCGCGCTCAAGCAACACCCAGCCGACAATGTCCAGGACGACGCCGGGATCA GTGTCTGGCGTTTCACCGGGCGACGGTTCACCGAATACCCCCGATTTGACCTCATCCACTGCAGTAGTTCCGCCA GCACTTCGACCTCGAGGTTACGTGCCCCCATCAGCGAGGACACAGCAAGGAACACAGCACCCGGCCCCTACTGCT GCTTCTCCAGTGCCAACGTCGTCAAGTTATTATCAGCAGTCGCAAGCTCAACAACATTCGCACACGGCTGGTCCA TTCTCTCATCTGCCACCACATCCTGAAGAATTCGACGATGGCGCCTATGTTGCTCCGCTAGTTACGACGCCCGCC CAGTCATCATCGGCCAACTTTGTGACAACTGGCACGCCACCTTCACGCTCGATGAATGCGGGAAACTCCAGATAT GGGCGCCCCCTTCCGCAACGGCTAGAACTTGCTCGGCGAGCACATTTACTTGGCCATCATTACAACCCGCAGGCT GCGCAGGCCATTGTGGAGGCTCATATGCAGCTGCAGCGCCAACGCCAGCGTCAGCGCCAGGGGCTCGGTAACCAC CCCACGAAGCCATCCGCAAGTCTTGATAATGCGAAAGACGGCCGCCCCGAACCAAAGGAGGCGCATGAAATGCGA GTATCGCTCGAATGCAAGGTTTGCTTCACCCAACTCGTTGATACGGTACTGCTTCCTTGCGGCCATGCTGTCCTC TGTCGGTGGTGCGCCGAGATTCAGATCCCCAACAGCATTCTGGAACGAGGCTTGCTTGGGGGTCAGCCCCCGTGT GTGATATGCCGAGCGCCTGTGAAGCAAAAGGTGCGGATTTTTCTTTCTTGA |
Transcript | >Ani_SJS72_1|g721.t1 ATGGACTCTGCGAGTCGCCCTGCTTTTGAAGGGCTTCCCGCGGCGATTCCCAACAATAACAACTATCAAATCACC CCAACTTCCGCTACGTTGGCCCAATCTAACACCCAAGACGTAATGGACACCACGATTTCTGACGTGCCGCGTCCG ACATACCAACAAGAAGTCCCTACAGTCGCGAGTCTGTCTGGGGCTCCAAACGCCTTCTCATCCAATGCTATATCG AGCCAGACAGATTCTTTCCCTTCACAGCAACCACCACCGAGGTCCCATTTTTCATACTTGAGCAATGGCATCATC ACCATGCCCCGCTACACACCGAACCAGTACTATGGGGAACCGAGCAATATCGGTCATCAACTGGATTACATTCCT GGTGGAGGTCGAGGTCGCTCATTCGCGTACCCTCATGCACGAACACTCTCACTTTCACAGAACCAACACAGCGGC CTTCCTGCCTACCCCCAGCGGGACCCGCGCTCAAGCAACACCCAGCCGACAATGTCCAGGACGACGCCGGGATCA GTGTCTGGCGTTTCACCGGGCGACGGTTCACCGAATACCCCCGATTTGACCTCATCCACTGCAGTAGTTCCGCCA GCACTTCGACCTCGAGGTTACGTGCCCCCATCAGCGAGGACACAGCAAGGAACACAGCACCCGGCCCCTACTGCT GCTTCTCCAGTGCCAACGTCGTCAAGTTATTATCAGCAGTCGCAAGCTCAACAACATTCGCACACGGCTGGTCCA TTCTCTCATCTGCCACCACATCCTGAAGAATTCGACGATGGCGCCTATGTTGCTCCGCTAGTTACGACGCCCGCC CAGTCATCATCGGCCAACTTTGTGACAACTGGCACGCCACCTTCACGCTCGATGAATGCGGGAAACTCCAGATAT GGGCGCCCCCTTCCGCAACGGCTAGAACTTGCTCGGCGAGCACATTTACTTGGCCATCATTACAACCCGCAGGCT GCGCAGGCCATTGTGGAGGCTCATATGCAGCTGCAGCGCCAACGCCAGCGTCAGCGCCAGGGGCTCGGTAACCAC CCCACGAAGCCATCCGCAAGTCTTGATAATGCGAAAGACGGCCGCCCCGAACCAAAGGAGGCGCATGAAATGCGA GTATCGCTCGAATGCAAGGTTTGCTTCACCCAACTCGTTGATACGGTACTGCTTCCTTGCGGCCATGCTGTCCTC TGTCGGTGGTGCGCCGAGATTCAGATCCCCAACAGCATTCTGGAACGAGGCTTGCTTGGGGGTCAGCCCCCGTGT GTGATATGCCGAGCGCCTGTGAAGCAAAAGGTGCGGATTTTTCTTTCTTGA |
Gene | >Ani_SJS72_1|g721.t1 ATGGACTCTGCGAGTCGCCCTGCTTTTGAAGGGCTTCCCGCGGCGATTCCCAACAATAACAACTATCAAATCACC CCAACTTCCGCTACGTTGGCCCAATCTAACACCCAAGACGTAATGGACACCACGATTTCTGACGTGCCGCGTCCG ACATACCAACAAGAAGGTCAGTGCAATGATGCCGGTGATGTCTGCTAGTGAAATAACGGAATGCTTCCCAGTCCC TACAGTCGCGAGTCTGTCTGGGGCTCCAAACGCCTTCTCATCCAATGCTATATCGAGCCAGACAGATTCTTTCCC TTCACAGCAACCACCACCGAGGTCCCATTTTTCATACTTGAGCAATGGCATCATCACCATGCCCCGCTACACACC GAACCAGTACTATGGGGAACCGAGCAATATCGGTCATCAACTGGATTACATTCCTGGTGGAGGTCGAGGTCGCTC ATTCGCGTACCCTCATGCACGAACACTCTCACTTTCACAGAACCAACACAGCGGCCTTCCTGCCTACCCCCAGCG GGACCCGCGCTCAAGCAACACCCAGCCGACAATGTCCAGGACGACGCCGGGATCAGTGTCTGGCGTTTCACCGGG CGACGGTTCACCGAATACCCCCGATTTGACCTCATCCACTGCAGTAGTTCCGCCAGCACTTCGACCTCGAGGTTA CGTGCCCCCATCAGCGAGGACACAGCAAGGAACACAGCACCCGGCCCCTACTGCTGCTTCTCCAGTGCCAACGTC GTCAAGTTATTATCAGCAGTCGCAAGCTCAACAACATTCGCACACGGCTGGTCCATTCTCTCATCTGCCACCACA TCCTGAAGAATTCGACGATGGCGCCTATGTTGCTCCGCTAGTTACGACGCCCGCCCAGTCATCATCGGCCAACTT TGTGACAACTGGCACGCCACCTTCACGCTCGATGAATGCGGGAAACTCCAGATATGGGCGCCCCCTTCCGCAACG GCTAGAACTTGCTCGGCGAGCACATTTACTTGGCCATCATTACAACCCGCAGGCTGCGCAGGCCATTGTGGAGGC TCATATGCAGCTGCAGCGCCAACGCCAGCGTCAGCGCCAGGGGCTCGGTAACCACCCCACGAAGCCATCCGCAAG TCTTGATAATGCGAAAGACGGCCGCCCCGAACCAAAGGAGGCGCATGAAATGCGAGTATCGCTCGAATGCAAGGT TTGCTTCACCCAACTCGTTGATACGGTACTGCTTCCTTGCGGCCATGCTGTCCTCTGTCGGTGGTGCGCCGAGAT TCAGATCCCCAACAGCATTCTGGAACGAGGCTTGCTTGGGGGTCAGCCCCCGTGTGTGATATGCCGAGCGCCTGT GAAGCAAAAGGTAAAGGCCGATGTTGAAGACTTCCCTGGATCATTGACCATCGCTCACACTGACTTGGGGACACA GGTGCGGATTTTTCTTTCTTGA |