© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g7162.t1 |
| Gene name | |
| Location | scaffold_057:52503..54251 |
| Strand | - |
| Gene length (bp) | 1748 |
| Transcript length (bp) | 1605 |
| Coding sequence length (bp) | 1605 |
| Protein length (aa) | 535 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-33 | 97 | 481 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 91 | 113 | 22 |
| 2 | 128 | 150 | 22 |
| 3 | 163 | 185 | 22 |
| 4 | 220 | 242 | 22 |
| 5 | 249 | 268 | 19 |
| 6 | 327 | 346 | 19 |
| 7 | 367 | 389 | 22 |
| 8 | 404 | 426 | 22 |
| 9 | 433 | 455 | 22 |
| 10 | 465 | 487 | 22 |
| 11 | 500 | 522 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g7162.t1 MWDIIRDSTFGQCLRLASGGKLAGYPEEQPGFQVPAGSLKPSASPSSTLLSDREVIGDPEKANKESNVLVIGWYG DNDPEKPHNWSFGKKLWVSMLLFVYTFSVYIGSSLYTASEPDIMRIYGVGDEVAELGLTMYVLAYGLGPMLFSPL SEIPAVGRTLPYTVTYFLFVILCIPMALVNNIAGIHILRFLLGFFGSPCLATAGASYGDFYGAKQMPYVIALWGG GATLGPALGPLVAGFAVEKMGWRWSSWELLWLSAPTMVIMFLSMPETSSDNILLRRARRLRTQTGRIDIKSESEI RQSKMSPRAITFNALIKPWEINALDPAVLFSTFYTALTYAIYYSFFESFPLVYTDMYGFTLGEQGLAFLAVLCGL CVAVGLLCAYFYFIAPKQLGKLDPVPPEARIWPGLFATWLIPTGLYIFAWTSSPSIHWIVSLVGIAISMCGVFII TQCMFIYLPFTYPRYAGSLFAANGFARSLLAGASILFSRPMFQGIKVSGGVSLLASLSVFCIVGMFLLYFFGARL RERSRFTGL* |
| Coding | >Ani_SJS72_1|g7162.t1 ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATAC CCTGAGGAGCAACCTGGTTTCCAAGTACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTCTTCTC TCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAATCCAACGTATTAGTCATCGGCTGGTATGGT GACAACGATCCAGAGAAACCACACAACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTGTCTAC ACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAGCCGGACATCATGCGGATCTATGGTGTTGGT GACGAAGTGGCCGAGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTTCCTCTTCGTCATTCTCTGCATTCCT ATGGCTCTGGTTAATAATATTGCGGGTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG GCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAAATGCCCTATGTCATTGCTTTATGGGGAGGA GGTGCGACTTTGGGCCCGGCCCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCGCTGGAGC TCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGATCATGTTCCTCAGTATGCCCGAGACATCATCAGAC AACATCCTGCTCCGTCGCGCTCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTCCGAGATT CGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACGCTCTCATCAAACCATGGGAGATAAACGCTCTTGAC CCTGCTGTTCTTTTCTCAACCTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCC CTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCAGGGTCTCGCATTCCTTGCTGTGCTGTGCGGTCTC TGTGTTGCGGTCGGTCTTCTATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTG CCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACATGGCTTATTCCAACGGGATTATATATCTTTGCATGG ACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATC ACCCAGTGCATGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCGCCGCCAACGGCTTC GCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTGGTGGA GTGAGTCTGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTTTCGGGGCGCGGTTG CGGGAGAGGAGTCGGTTTACGGGGCTGTGA |
| Transcript | >Ani_SJS72_1|g7162.t1 ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATAC CCTGAGGAGCAACCTGGTTTCCAAGTACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTCTTCTC TCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAATCCAACGTATTAGTCATCGGCTGGTATGGT GACAACGATCCAGAGAAACCACACAACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTGTCTAC ACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAGCCGGACATCATGCGGATCTATGGTGTTGGT GACGAAGTGGCCGAGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTTCCTCTTCGTCATTCTCTGCATTCCT ATGGCTCTGGTTAATAATATTGCGGGTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG GCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAAATGCCCTATGTCATTGCTTTATGGGGAGGA GGTGCGACTTTGGGCCCGGCCCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCGCTGGAGC TCCTGGGAACTTCTCTGGCTATCCGCCCCTACAATGGTGATCATGTTCCTCAGTATGCCCGAGACATCATCAGAC AACATCCTGCTCCGTCGCGCTCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTCCGAGATT CGTCAGTCAAAGATGAGTCCAAGAGCAATTACTTTCAACGCTCTCATCAAACCATGGGAGATAAACGCTCTTGAC CCTGCTGTTCTTTTCTCAACCTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCC CTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCAGGGTCTCGCATTCCTTGCTGTGCTGTGCGGTCTC TGTGTTGCGGTCGGTCTTCTATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTG CCTCCTGAAGCTCGTATTTGGCCGGGATTGTTCGCGACATGGCTTATTCCAACGGGATTATATATCTTTGCATGG ACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATC ACCCAGTGCATGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCGCCGCCAACGGCTTC GCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTGGTGGA GTGAGTCTGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTTTCGGGGCGCGGTTG CGGGAGAGGAGTCGGTTTACGGGGCTGTGA |
| Gene | >Ani_SJS72_1|g7162.t1 ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATAC CCTGAGGAGCAACCTGGTTTCCAAGTACCAGCTGGATCCCTCAAGCCCTCTGCCTCCCCCTCATCCACTCTTCTC TCAGATAGGGAGGTCATTGGGGATCCGGAAAAAGCAAACAAAGAATCCAACGTATTAGTCATCGGCTGGTATGGT GACAACGATCCAGAGAAACCACACAACTGGTCCTTCGGAAAGAAGCTCTGGGTTTCCATGTTGCTCTTTGTCTAC ACCTTCTCCGTTTATATTGGCTCCTCGCTATATACTGCCAGTGAGCCGGACATCATGCGGATCTATGGTGTTGGT GACGAAGTGGCCGAGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTTCCTCTTCGTCATTCTCTGCATTCCT ATGGCTCTGGTTAATAATATTGCGGGTATTCATATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG GCTACGGCCGGCGCAAGCTATGGCGATTTCTACGGCGCAAAACAAATGCCCTATGTCATTGCTTTATGGGGAGGA GGTGCGACTTTGGGCCCGGTAGGTTCAGTTCCTATAAATCCTCGCACTTATCATACTAAATAGTACGTTTTAAAG GCCCTCGGACCCCTCGTCGCCGGATTCGCCGTCGAAAAAATGGGCTGGCGCTGGAGCTCCTGGGAACTTCTCTGG CTATCCGCCCCTACAATGGTGATCATGTTCCTCAGTATGCCCGAGACATCATCAGACAACATCCTGCTCCGTCGC GCTCGACGCCTACGCACTCAAACAGGTCGCATAGACATCAAGTCCGAGTCCGAGATTCGTCAGTCAAAGATGAGT CCAAGAGCAATTACTTTCAACGCTCTCATCAAACCATGGGAGATAAACGCTCTTGACCCTGCTGTTCTTTTCTCA ACCTTTTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCCCTCGTGTATACAGACATG TACGGCTTCACTCTGGGCGAGCAGGGTCTCGCATTCCTTGCTGTGCTGTGCGGTCTCTGTGTTGCGGTCGGTCTT CTATGCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTGCCTCCTGAAGCTCGTATT TGGCCGGGATTGTTCGCGACATGGCTTATTCCAACGGGATTATATATCTTTGGTACGTTCTTCTTCCTGTCCTTT AACTTCTCCTCGATTCTCTTTTGTCTGTGAAGGTTGTAATTTATACTAATCAATATCCTCCAGCATGGACCTCCT CCCCCTCCATCCATTGGATCGTCAGCCTGGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGT GCATGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCGCCGCCAACGGCTTCGCGCGCA GTCTACTTGCTGGTGCTTCTATTCTCTTCTCTCGCCCAATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGAGTC TGCTTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTTTCGGGGCGCGGTTGCGGGAGA GGAGTCGGTTTACGGGGCTGTGA |