Protein ID | Ani_SJS72_1|g7131.t1 |
Gene name | |
Location | scaffold_056:205367..206476 |
Strand | - |
Gene length (bp) | 1109 |
Transcript length (bp) | 1023 |
Coding sequence length (bp) | 1023 |
Protein length (aa) | 341 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07950 | MCP1_TM | MDM10-complementing protein 1, transmembrane domain | 2.5E-05 | 93 | 169 |
PF07950 | MCP1_TM | MDM10-complementing protein 1, transmembrane domain | 2.9E-33 | 190 | 316 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 57 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 229 | 251 | 22 |
2 | 290 | 312 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g7131.t1 MAASKESMPSKPEDIETRSIFSMQELDPSPVQDEFPDLESGDYFPREPSPPSAREPIAGGGRFSSLKLGLRGHSW DSWLSAFQRYSTYPPTLFFALHWANTSLIPLATRSVPDSESFLLLTRPVYQSPGLEHLVLTAPVLIHIASGIALR NIRSARRARLYGAETRSQRHSLTFWPRMSLQARLGYSLVPLLGVHVLVNRITPLMVDGGSSGVGLGYVAHGFARA PALWNLYYLLFVAVGVWHFVGGWAAWMGWRVTTVRKERDRKKGSLEGYLGASESEQRLRRQRKMWWTVNGIAAVG ASIWLAGALGIIGRTGQGYGWEAKGWNEIYSQVPVIGSWL* |
Coding | >Ani_SJS72_1|g7131.t1 ATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAG TTAGACCCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCG CCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGG GATTCCTGGTTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCATTGCATTGGGCCAAT ACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTAT CAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCTGGAATTGCTTTGCGC AACATCCGCTCCGCACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGG CCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCATGTGCTCGTCAACCGC ATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCC CCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTCGGCGGCTGGGCTGCA TGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGA GCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGCATTGCCGCGGTGGGA GCATCCATATGGCTTGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGA TGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGA |
Transcript | >Ani_SJS72_1|g7131.t1 ATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAG TTAGACCCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCG CCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGG GATTCCTGGTTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCATTGCATTGGGCCAAT ACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTAT CAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCTGGAATTGCTTTGCGC AACATCCGCTCCGCACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGG CCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCATGTGCTCGTCAACCGC ATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCC CCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTCGGCGGCTGGGCTGCA TGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGA GCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGCATTGCCGCGGTGGGA GCATCCATATGGCTTGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGA TGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGA |
Gene | >Ani_SJS72_1|g7131.t1 ATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAG TTAGACCCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCG CCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGG GATTCCTGGTGTATGGCTAAGTATATGCAAGCTATTGTGATAATAGCAAGAATTTACTCTTTTCCTAGAAGCTAA CAGTGGCCTCAAATTCTCCAGTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCATTGC ATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCA GACCCGTCTATCAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCTGGAA TTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCT TGACGTTTTGGCCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCATGTGC TCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCT TTGCACGGGCCCCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTCGGCG GCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGG GTTATCTGGGAGCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGCATTG CCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGG AGGCCAAGGGATGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGA |