Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g7085.t1
Gene name
Locationscaffold_056:54362..54839
Strand+
Gene length (bp)477
Transcript length (bp)477
Coding sequence length (bp)477
Protein length (aa) 159

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13577 SnoaL_4 SnoaL-like domain 6.6E-24 11 142

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g7085.t1
MSFYPATLPALPLREAIVDPVYRAVLSFDGNDLPLFESAFFEDAAFDFNGSVMEGRAAIKSGSWDNVSKLDTTHF
LSNVRINLPSEDSTTATVTASALAQHFRTGQGNQPDTTRLTSGALYSFDVAKDPADANGLWKIKLWKMKLVWTEG
DWGVMTGN*
Coding >Ani_SJS72_1|g7085.t1
ATGTCTTTCTATCCCGCCACCCTCCCCGCGCTCCCCCTCCGCGAGGCTATCGTGGACCCGGTTTACCGCGCCGTC
CTCTCCTTCGATGGCAACGACCTCCCCCTCTTTGAGTCGGCCTTCTTCGAGGACGCCGCCTTCGACTTCAACGGC
AGCGTGATGGAGGGCCGCGCGGCCATCAAGTCTGGCAGCTGGGACAACGTCTCCAAGCTGGACACCACCCATTTC
CTTAGCAACGTGCGCATCAACCTCCCCTCGGAGGACAGCACGACCGCGACTGTGACCGCCTCAGCTTTGGCCCAG
CACTTCCGCACAGGCCAGGGGAACCAGCCCGACACCACCCGCCTGACGAGCGGGGCGCTGTACTCTTTCGACGTG
GCCAAGGATCCCGCGGATGCGAATGGATTGTGGAAAATCAAGCTGTGGAAGATGAAACTGGTGTGGACGGAGGGT
GACTGGGGGGTGATGACGGGAAATTAG
Transcript >Ani_SJS72_1|g7085.t1
ATGTCTTTCTATCCCGCCACCCTCCCCGCGCTCCCCCTCCGCGAGGCTATCGTGGACCCGGTTTACCGCGCCGTC
CTCTCCTTCGATGGCAACGACCTCCCCCTCTTTGAGTCGGCCTTCTTCGAGGACGCCGCCTTCGACTTCAACGGC
AGCGTGATGGAGGGCCGCGCGGCCATCAAGTCTGGCAGCTGGGACAACGTCTCCAAGCTGGACACCACCCATTTC
CTTAGCAACGTGCGCATCAACCTCCCCTCGGAGGACAGCACGACCGCGACTGTGACCGCCTCAGCTTTGGCCCAG
CACTTCCGCACAGGCCAGGGGAACCAGCCCGACACCACCCGCCTGACGAGCGGGGCGCTGTACTCTTTCGACGTG
GCCAAGGATCCCGCGGATGCGAATGGATTGTGGAAAATCAAGCTGTGGAAGATGAAACTGGTGTGGACGGAGGGT
GACTGGGGGGTGATGACGGGAAATTAG
Gene >Ani_SJS72_1|g7085.t1
ATGTCTTTCTATCCCGCCACCCTCCCCGCGCTCCCCCTCCGCGAGGCTATCGTGGACCCGGTTTACCGCGCCGTC
CTCTCCTTCGATGGCAACGACCTCCCCCTCTTTGAGTCGGCCTTCTTCGAGGACGCCGCCTTCGACTTCAACGGC
AGCGTGATGGAGGGCCGCGCGGCCATCAAGTCTGGCAGCTGGGACAACGTCTCCAAGCTGGACACCACCCATTTC
CTTAGCAACGTGCGCATCAACCTCCCCTCGGAGGACAGCACGACCGCGACTGTGACCGCCTCAGCTTTGGCCCAG
CACTTCCGCACAGGCCAGGGGAACCAGCCCGACACCACCCGCCTGACGAGCGGGGCGCTGTACTCTTTCGACGTG
GCCAAGGATCCCGCGGATGCGAATGGATTGTGGAAAATCAAGCTGTGGAAGATGAAACTGGTGTGGACGGAGGGT
GACTGGGGGGTGATGACGGGAAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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